Mgen005150.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malaya genurostris
Gene Symbol
-
Assembly
GCA_030247185.2
Location
CM058071.2:111184106-111193569[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.00011 0.0082 17.7 1.1 1 23 1369 1392 1369 1392 0.97
2 13 0.0031 0.25 13.1 1.0 1 23 1497 1519 1497 1519 0.99
3 13 0.00013 0.0099 17.5 1.4 2 23 1522 1543 1522 1543 0.97
4 13 0.00024 0.019 16.6 1.8 1 23 1549 1571 1549 1571 0.98
5 13 6.3e-05 0.0049 18.4 4.6 2 23 1578 1599 1577 1600 0.95
6 13 0.65 51 5.8 0.4 5 23 1613 1631 1611 1631 0.95
7 13 0.001 0.082 14.6 3.2 2 23 1637 1659 1636 1659 0.96
8 13 0.16 13 7.7 0.9 2 23 1672 1692 1672 1692 0.97
9 13 0.00041 0.032 15.9 1.5 1 20 1699 1718 1699 1721 0.92
10 13 0.0061 0.48 12.2 0.2 1 23 1729 1751 1729 1751 0.98
11 13 0.00029 0.022 16.4 5.7 1 23 1757 1779 1757 1779 0.98
12 13 4e-05 0.0031 19.1 4.2 1 23 1785 1807 1785 1807 0.99
13 13 0.0029 0.23 13.2 5.4 1 23 1813 1835 1813 1836 0.96

Sequence Information

Coding Sequence
ATGGGTTCCGTGGAGTGTCCCGTTTGCACGCTTTATCTCCGGGCTGACATGAGCCTGGAGGAACATCTGGAGACGCATCCAACGGATAAAGTCATCAAAGCTTTGGTTGCGATGGCTACGAAGAATACAGCGGCACCATATGCAGCACAACCGGCTCCGGTAGTTTCGGTAGTTTCAGCGGCCAACACTCAGACTGCGTTGGAATTGACTCCGATGCCAGCGTGTAGTTCACGCTCTCACACACCACCGAATGCACTTATGTACCATTCCAGTGGATATGAATCCATGCAACAGCCGGTTCCTGCACCACCGCCTCCACCACCACCTGCGCCGATCGTTACGAATGCCGTTCCCACTGCGATAACTGTTGTGAAGACCTCGGATGTCGGTTATCCGCTGAACAATGTTATGATCGTCAAAAGTTGTAGCACCAAATTTCTTCAGCAAATGGCCTCCGGTAGTGGTAATCCTGGCGGGGGAAGTAACAATATATCAACAGCTACATACACTGCAGGGCCAGTTAGTGGCAAAGGAATGTACATTGAATCTGACCGAGGAGTTTCCAACGAAAGCAAAACAGCATCCATCACAGTTCGCCGTCAGCTTGCCCCTTCTCTTTATCCACGGTACACAAACGAACGTTATTCGGGGCCACCCCCACCTTACAGTACAGCCATATCCTCTACAATATCTACCGGAACGCAACTGCAACAatcatcaataacggagtatGGCTCCAAGTATGAACAGAAACAAATCCATCATCTACCGCCATCATTCTATGTTAGCACTCCGCCAGCAAAGCAGCATACGATACCGACAGCGCCGACCATTACAATATCCCAACAACATCAATTCTATCAAGCGCAGCCACCTCCGCCACCGCCTTCGATGCTGAGTCAATCTTCGATTGGGATTCACCAGCAGCATCAACAATTTCAAGCATCAACATCTAGCTTCAGGGCTCATAATTTTCTTCAGGCTCAGTACACAGAAAAAGATGATGGAAATTTCCTAGTTACCGAGAATCCCAAGAAAATCGTTGAATATACCGAAAACGACGAAGGAGACTTTATGGTGATTGAGAAAATCATCAAATCACCACCGACGGTTGTGCAAATTGATGATTCCACAGCAAAAAAAGAATCGCAATCGGTGGACGATGATGATATTGATCAAAGTCAACCTAAAAATGACGAACAGGAAGAAGAAACCGAAGAATATGAGATGGAAATCGATGAAGAAGAGCCATATACAAATGAATACGAGAACAAAGTGCAGTCACAACAACCGAACACGATAGAAATAGTTGAGGATGATGATGGTTCTTTCAATGATAACAGGAATCGGCTCAACTTTAAAGATATGCCAAAGCCGATGCTGATCGGTAGTATCGGAAATGGTAGAAACTGCAACAAGTTCAATTTCATCGTCGAAGCTTCTGCCTCGGGTTCGGGCCATTCATCAAACAGCTCTAACGCAGCCAAACGGAAACCAGCCAGTGGTTTGAAAGTACTGAGTAACGTTAAAGTTACCACTGATTTATCTCAAGGCATTAAAGATATCATCCTCAACTTGAACTGTAAAAGCAAAGCCGCAAATGTTGTTGGGAGTGGTGGAAACTCCGTCAGTGTTGACGGTCTGAACACAAACTGCATTGCAGGGGTGAAACCAACGGCtgtagtcaacaacaattgtcaaAATGAGCTTATCATAAATTCCGGAAGTAATATGCCACCGATTGATCTCACTAATGTAAATGACATTGAAATTATCAACGAAGACGAGGAAGACATTCACCCTGATGAAGACGAAGAATGTTATATCGGTTCAATGGAAGTGAAAGCATCCAATGCGGAGAATGATACAGTGAATCAAGAAACGATAGAGTCGTGCGCTTCTCCCACAGATTCGGCTCTACGTACGACACCTACTCCTTCCGTTATTACCAGTGTCATCCGTATGACACCCCACACATCACCGGTAGTAGCTTCTTCGGCACCATCTCCACTGATGCAAGCTACTCTCGAATCTTCGCCAGCGCAAACTATTGCGTCAGCAAACACGGAGACATCGTTTGAGAGCACATCCGAAGATACTAATAGTAAACCAAGTGTTTTGTCGACACCGCCTAAAAAGGTACCAGCGCAACAGGCGCATGCCTATTCAACAGGGCCACTCTTTAACAAGCAACCGAAAAAACTTACCGTGAAACTGAAAACACCACTTCCTCCAGTACCTCCGGAAACACCGCCTCTTATTCCATCTCTTCAAACGGACGAAATCCCTGTTCCGATGATTACACCGAAGGTTGAACGTAGCGAATACGATGCTGAGCCATTCCATCAGCCAATGCAACCTGAGGCTGCATCTTCAAAACTCGCTATCAAACCCAGAGATGGTGACATTTCGTCATTATCTTCATCGCCAAGACACCCGACCGAAGAGGATGAGAATAAATTTTCCAGCAAGTTTGTGCAATCTCAGTTCTCACTTAGTTCGTCATTCATTGGTGAATCAGCAACAGATATAGCTACAGAGACTATAACAACAACGACGTTGATAACCACCAAGGTCGAGAAGGATACTCCGCTTTCCGAGACGATCATTTTCACCAAATCTAGCAGCAGTGGACCACCATCGAACTTGACCAACTACGATGACTGTGATAGTAAACAAAAGGgaatgtcgtcgtcgtcgtcgtcccaTGAAACAGCACAACTAGGTCCGAGTACTACCAGTGAGGAGATTGAGTGCTATAAAATCACTTTCATCGACGACGAAGTGGCTGCGACCTCGGACAGTCAACCGAAATCCGAAACGAGTGATGCAGTCGCTGCCCATGAGGTGGTAGCTCAGAGTTCAGACTGTAGCAACGATGGTAGCGAAACTAAACCGAAACTAGAAAATGACGAGAGAGTGTGTGTCACGAACGAAATCGACGGTTATTCTCTGTCGAATTATAGCAGCTCACATCAGCCCGACCAGCCCGGAATTTCCGCTTTACCATCCTCTCAAGATTCTAAACAGTCGGATTCTATACTGAAAAGTTGtattaaaattgaaaaagtggaaaaaattgataaaagagCTATTGATGAGCTTGTAGCTAGCGCTACTGTCAGTGGAAGAAAGGTAGATTATAAGGTTGCCAAAATCGAACCGTCTGCAACTGTCACTTCGTCTACTGCGTGTGAATATCAGAAAGATCAAAAGGATCTTCTCGAGGCTGGACCATCGAGCGCACTGAATAATGCTCACAGTCGCAGTGGCAGTGGTAATGGTAATGCTCGTTCCGAGATCGCAGGCCCCACTTTCTTAGAATATAGTGTTGAATACGATGACTACGTTCCGGTTTCGAGCTATGGTTTGCCACAGGAACAAATACCACTGTCGTGGGTGCAGAAATTCAGCCCCCAGTACACACCGTTCGATGATCAAAACTCCTATATGGATCTTGATATGTGCAGCAATAAAACCAACTCTAACAGTGCTGCTGGTAGTAGTGCAACGTGTGCTAGCGCTAGCCTAGCAAGTCGCATCGATACTAGCCTAGACCGCGCCCCGTCGGCGGAGAGTTTGAACATTAGAACTGACGAAAAAATGCCCGCCAAGGGTGAAATATCCGAGCAGGAGAGTAACGGCGACATGGAGCTTTCATGGAACAGATTGTATCCGGTTCATGAGAATATCCCTATCTATCCAAGTTCGTACGATCTTTCAACGGCACAGGAGTGCTGGAATCTGAGCAATCGCAACAACTGCAATAGTCATAACAACAGCAGTAACAGTAGCAATAACAACAGTACAGGAGGGCTGCCCGGTACCAGTACTGCCTCCGGAGTACACCAGGACCGAGGTATATCACATCACCCATATCATCAGATCTACCATCCGTCTCATGGAGGAATTAATTTTCAATTCCCACCGCACGAGTCACAACGACATGGCGGTGACAATGGCGATGATCAAGTGGATGACAAATCGAAGATTCTCCTGGATTACGGTGCTGGTAACAGTGGAACGAGCTATCATGGTTTGGGAACTGGTTCCTCCGGTGTGTTACACGATGAATGCAATCGGAAGCTAGCAAAAAATCGTACTTATCGGTGTACCGAATGTCCAAAATCATTCGCATCACTGAAGCAACGACGCACTCATATGCTGTCAGAGCATAACATAGATGGCAAGGGTGATGCACTGGGTCATATCGCTGTGTCTGGCGTATCTGGTGTATCGTCAACAGTCACATCTGGGTCGGCATTAGGTTTCTTCTCCGGTCCGGGAGAAGGATCGAGCACAGCAGTATTGAATAAGAAGATCAAGTTAGAACCCCAACCAATGCTAATGAGCTATAGTTCACTGAAGCAGGAACTGGAACAGAAGCAAGAGGAAGGAATAGCAGGGAGTGAAATGCCAGGACCAAGTGGAATGCTTACCAATAGTAGCAACGTTCCTGTTAGCGGAGAAGTTCGCCGGAAACGAACGTACGTTTGTGGTACGTGCAAGCAAGAGTTTGATAGATTCAAATTATTTAATGCTCATTTGATGACTCACCCTGCCGAATGCTATACATGTGGTAGAAGTTTCCGGCATTGGCCAAATTTTGCCCTTCACATAAAGCGACATTTGGGAATAAAAGACCATCAGTGCCGGTTGTGTGGAAAGAAATTCGTGATTAAGCAAAAGTTGATTGAGCATATGCGAGTGCACACCGGAAAGGCTCCTATCAAATGTCCCGACTGCGATCAGCATTTCCGGCGGTTCTCGAACTTAGCTCAACATCGTAATCGACATCACCTGAACAAGATACCTTCGAAGAAAGATTTTGTGTGTCACTGCGGTGAGGTCTTCCAATCTAAGGCTAAAATGGAATGGCATAaagaaattcatgaaaacagGCCTAAAAGTTGCCCCTTCTGCCGGGAGAagttcattcacaaaaatagtcTGACCAGACACATTCGATTATCCCACACTGAGAAATATGTGAAACTAGAAATAGAAACTGAAACGTGCACGATCTGTAATCAGCCGTACATCAAGACGAGCATGAAGCGTCACATGGAAACGCATACCGAAGAGCGGATGGCATATTCGTGTACCATTTGTAACAAACTCTTCAGTACCAATTGGAATTTGAAGCAGCACAAATGGACACACGCAAATCCGACTCTCAAACCCTTTCAGTGTAATATGTGTTCAAGCGGGTTCGTTCGGGAGGCGGACTACATCACTCACATGAATGCCCACAAATCCATTCGACCGTACACATGCAACCACTGCGGgtgtcagtttatccggaaatACAACTGGATTCGACACACGCGAGAGCATGAAACGGATAAAAACTACACGTGCGAGATTTGTGGGCGTAAATTCCACCGCAAGTACTATCTTACAGAGCACAAGCGGATTCACACCGGTGAGCGACCGTTTTCCTGCAACATTTGTGGCAAAACTTCGTCGACCAAAACGAATCACAACAAACACATCAAGATCCACCATGCACGAGATCCACTGACTGCAGAGGGTTAA
Protein Sequence
MGSVECPVCTLYLRADMSLEEHLETHPTDKVIKALVAMATKNTAAPYAAQPAPVVSVVSAANTQTALELTPMPACSSRSHTPPNALMYHSSGYESMQQPVPAPPPPPPPAPIVTNAVPTAITVVKTSDVGYPLNNVMIVKSCSTKFLQQMASGSGNPGGGSNNISTATYTAGPVSGKGMYIESDRGVSNESKTASITVRRQLAPSLYPRYTNERYSGPPPPYSTAISSTISTGTQLQQSSITEYGSKYEQKQIHHLPPSFYVSTPPAKQHTIPTAPTITISQQHQFYQAQPPPPPPSMLSQSSIGIHQQHQQFQASTSSFRAHNFLQAQYTEKDDGNFLVTENPKKIVEYTENDEGDFMVIEKIIKSPPTVVQIDDSTAKKESQSVDDDDIDQSQPKNDEQEEETEEYEMEIDEEEPYTNEYENKVQSQQPNTIEIVEDDDGSFNDNRNRLNFKDMPKPMLIGSIGNGRNCNKFNFIVEASASGSGHSSNSSNAAKRKPASGLKVLSNVKVTTDLSQGIKDIILNLNCKSKAANVVGSGGNSVSVDGLNTNCIAGVKPTAVVNNNCQNELIINSGSNMPPIDLTNVNDIEIINEDEEDIHPDEDEECYIGSMEVKASNAENDTVNQETIESCASPTDSALRTTPTPSVITSVIRMTPHTSPVVASSAPSPLMQATLESSPAQTIASANTETSFESTSEDTNSKPSVLSTPPKKVPAQQAHAYSTGPLFNKQPKKLTVKLKTPLPPVPPETPPLIPSLQTDEIPVPMITPKVERSEYDAEPFHQPMQPEAASSKLAIKPRDGDISSLSSSPRHPTEEDENKFSSKFVQSQFSLSSSFIGESATDIATETITTTTLITTKVEKDTPLSETIIFTKSSSSGPPSNLTNYDDCDSKQKGMSSSSSSHETAQLGPSTTSEEIECYKITFIDDEVAATSDSQPKSETSDAVAAHEVVAQSSDCSNDGSETKPKLENDERVCVTNEIDGYSLSNYSSSHQPDQPGISALPSSQDSKQSDSILKSCIKIEKVEKIDKRAIDELVASATVSGRKVDYKVAKIEPSATVTSSTACEYQKDQKDLLEAGPSSALNNAHSRSGSGNGNARSEIAGPTFLEYSVEYDDYVPVSSYGLPQEQIPLSWVQKFSPQYTPFDDQNSYMDLDMCSNKTNSNSAAGSSATCASASLASRIDTSLDRAPSAESLNIRTDEKMPAKGEISEQESNGDMELSWNRLYPVHENIPIYPSSYDLSTAQECWNLSNRNNCNSHNNSSNSSNNNSTGGLPGTSTASGVHQDRGISHHPYHQIYHPSHGGINFQFPPHESQRHGGDNGDDQVDDKSKILLDYGAGNSGTSYHGLGTGSSGVLHDECNRKLAKNRTYRCTECPKSFASLKQRRTHMLSEHNIDGKGDALGHIAVSGVSGVSSTVTSGSALGFFSGPGEGSSTAVLNKKIKLEPQPMLMSYSSLKQELEQKQEEGIAGSEMPGPSGMLTNSSNVPVSGEVRRKRTYVCGTCKQEFDRFKLFNAHLMTHPAECYTCGRSFRHWPNFALHIKRHLGIKDHQCRLCGKKFVIKQKLIEHMRVHTGKAPIKCPDCDQHFRRFSNLAQHRNRHHLNKIPSKKDFVCHCGEVFQSKAKMEWHKEIHENRPKSCPFCREKFIHKNSLTRHIRLSHTEKYVKLEIETETCTICNQPYIKTSMKRHMETHTEERMAYSCTICNKLFSTNWNLKQHKWTHANPTLKPFQCNMCSSGFVREADYITHMNAHKSIRPYTCNHCGCQFIRKYNWIRHTREHETDKNYTCEICGRKFHRKYYLTEHKRIHTGERPFSCNICGKTSSTKTNHNKHIKIHHARDPLTAEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-