Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058072.1:101677819-101679967[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.8e-05 0.0038 18.8 4.5 2 23 147 168 146 168 0.97

2 14 0.32 25 6.8 0.0 2 23 206 228 205 228 0.94

3 14 0.00019 0.015 16.9 1.4 1 23 234 256 234 256 0.97

4 14 5.7e-05 0.0045 18.6 1.4 1 23 262 285 262 285 0.96

5 14 0.0018 0.14 13.9 3.3 1 23 290 312 290 312 0.98

6 14 0.00081 0.064 14.9 7.3 1 23 318 340 318 340 0.99

7 14 6.5e-06 0.00051 21.5 1.9 1 23 346 368 346 368 0.95

8 14 3.9e-05 0.0031 19.1 2.2 1 23 374 396 374 396 0.97

9 14 1.2e-06 9.6e-05 23.8 1.7 1 23 402 424 402 424 0.99

10 14 6.8e-06 0.00053 21.5 0.8 1 23 492 514 492 514 0.98

11 14 1.2e-05 0.00092 20.7 0.2 1 23 520 543 520 543 0.95

12 14 6.2e-06 0.00048 21.6 1.7 1 23 549 571 549 571 0.99

13 14 8e-06 0.00063 21.3 0.9 1 23 577 599 577 599 0.98

14 14 1.7 1.3e+02 4.5 1.1 1 23 605 627 605 627 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.8e-05	0.0038	18.8	4.5	2	23	147	168	146	168	0.97
2	14	0.32	25	6.8	0.0	2	23	206	228	205	228	0.94
3	14	0.00019	0.015	16.9	1.4	1	23	234	256	234	256	0.97
4	14	5.7e-05	0.0045	18.6	1.4	1	23	262	285	262	285	0.96
5	14	0.0018	0.14	13.9	3.3	1	23	290	312	290	312	0.98
6	14	0.00081	0.064	14.9	7.3	1	23	318	340	318	340	0.99
7	14	6.5e-06	0.00051	21.5	1.9	1	23	346	368	346	368	0.95
8	14	3.9e-05	0.0031	19.1	2.2	1	23	374	396	374	396	0.97
9	14	1.2e-06	9.6e-05	23.8	1.7	1	23	402	424	402	424	0.99
10	14	6.8e-06	0.00053	21.5	0.8	1	23	492	514	492	514	0.98
11	14	1.2e-05	0.00092	20.7	0.2	1	23	520	543	520	543	0.95
12	14	6.2e-06	0.00048	21.6	1.7	1	23	549	571	549	571	0.99
13	14	8e-06	0.00063	21.3	0.9	1	23	577	599	577	599	0.98
14	14	1.7	1.3e+02	4.5	1.1	1	23	605	627	605	627	0.93

Sequence Information

Coding Sequence: ATGAAAACTAGAGAACCGTTGGCCACGATCAGTGTGGACCAATTATCACTTGCCTTCACCTGTCGGACATGTCTGAATACCGATTCTCGGCAGTTGTTGATTCCCATTTTCGAGGACCACAAAGCCAGTGGCAAGTCACCGTATGATCTGTTCGATCAACTTGTTTTCCTAAAGCTGAAGATATCGGAGAATGATGGCTTTCCAGCTAACATTTGTAGCAGTTGCATGGAACGCCTTTCCGCCGTAAATGCTTTTAGAACACAATGTGAGAAAGCTCAAGAAATTTTGGATCGTTACTTTGCGGAGCTTTCTGAGCAGCATTTCTACAACGACAAGATAGACCCCGAAGAAGAATGCACAGAGTTTGAATATTTGGTTGAACCAGAACATGAGGATGTATCTGTAAAGGTAGAGTCAGCAAACAGTGACAATTTATTACGTTGTCCTACGTGCAGGAAGGTTTATAAACGGAAGGTACACTTGGAGCGCCATATACATAGCCACAGCCCGAATCAATCAAAAAGCATTTGTTTGCCAGTTACATCTACTACTAATAGCATCGACGAGAATGAAACGGATCCTAACGTGGAATCTGTTGCATTCACGAAAAAGATACAGTGTCGATACTGTAATGATATGTTTGCATCCGATGAGCTTTTAGCAGACCATATCGACGTATCGCATCTGAAAGATCGACCGTATTCATGTCCACTGTGTAGAAAATCCTTTCAAAGTGCGTCAAACAGGAACACTCATATGTATTTACATAATCGAGGTAATCCTTATAAATGTGACCAATGTGCACAATCATTCAAGAGCAAGGTTTATTTGAACCGGCACAGGAAAGCCATTCACACGATAGGTAGTCACAGGTGTGATCAATGTGGTGCTAGTTTTACCAATACCACTAAATATGAGTACCATTTGAAATCACATGATCCTAATAAAAAGTACAAGTGTTCATATTGTACCAAATCTTTCCTTCAGCAACATCATTTGTTAAATCACGAGAGAACTCACACCGGCAAACGTCCCTTTCTGTGCAACATTTGCGGGAAAGGATTTAAGCACGAGTCGAGTTTTAAAGTACACCTCAAGATACATGAAGGCATTCGAACGCATGTTTGTTCCGTTTGTTCAAAAACGTTTGTCCAGCGTAGCAGCTACCTTCAACACATGGCGAAACATAAAAATGTCCGCCGATTTCAATGTGAACAATGTGGCAAAAGTTTTATCCAGCGTACCTCGTTGCTGACTCATCTGAAAAAACATTCGGAAGACCGGATTCGGCAATGTCAACCATCGTTCACGACAACTTTTAGTTCTTTGCAACCACTGATGGATCACAATTCAGAATCATTATCCGCTCAGCAGACGTGCCTGGGTGATGTTGCGAAAATGAAGTCAAAAGAACCGATCAACGCCAACAGTGCGAAGGAAAAGAAACCATCACCTATGTACAAACTTATGCCGTACGCATGCCAGCTATGTAATAAATCATTCCGACTTCCGTCTACGTTGACGACACATCTGAAAATTCACAACGAAGAGCGGAAATACGTTTGCGAGGAGTGTGGCAGTACATTCAAAAGAGCCGAACATCTGCGAGTCCACGTTAACGGGGTACACTTGAAACGAAAACCGTACAGCTGTGAGGTTTGCCATAAATCGTTTGCCCAGTCGGGCGATCGGAATGTGCATATGCGACGGCACATGAACGAGAAACCCCATCAGTGCACCTATTGCGGCAAAGGTTTTCGGTTGGCCAAAGCTCTCAGAGCTCATGTTCGATTGCACACAGGAGAAAAACCGTTCGTATGCATTATTTGTAACATGAGTTTCATTTCTTATACGGCACTTGCCTGTCACACTCAAAAACACCAGGAAGAAACACTAGAAAGCTGTCGTCCGATAGAGACTGATTTCACTGTGTCGCAACTGGAAACGTCGACAAATGCTTGA
Protein Sequence: MKTREPLATISVDQLSLAFTCRTCLNTDSRQLLIPIFEDHKASGKSPYDLFDQLVFLKLKISENDGFPANICSSCMERLSAVNAFRTQCEKAQEILDRYFAELSEQHFYNDKIDPEEECTEFEYLVEPEHEDVSVKVESANSDNLLRCPTCRKVYKRKVHLERHIHSHSPNQSKSICLPVTSTTNSIDENETDPNVESVAFTKKIQCRYCNDMFASDELLADHIDVSHLKDRPYSCPLCRKSFQSASNRNTHMYLHNRGNPYKCDQCAQSFKSKVYLNRHRKAIHTIGSHRCDQCGASFTNTTKYEYHLKSHDPNKKYKCSYCTKSFLQQHHLLNHERTHTGKRPFLCNICGKGFKHESSFKVHLKIHEGIRTHVCSVCSKTFVQRSSYLQHMAKHKNVRRFQCEQCGKSFIQRTSLLTHLKKHSEDRIRQCQPSFTTTFSSLQPLMDHNSESLSAQQTCLGDVAKMKSKEPINANSAKEKKPSPMYKLMPYACQLCNKSFRLPSTLTTHLKIHNEERKYVCEECGSTFKRAEHLRVHVNGVHLKRKPYSCEVCHKSFAQSGDRNVHMRRHMNEKPHQCTYCGKGFRLAKALRAHVRLHTGEKPFVCIICNMSFISYTALACHTQKHQEETLESCRPIETDFTVSQLETSTNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -