Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058071.2:163577472-163579448[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.04 3.2 9.6 2.2 1 23 59 81 59 81 0.96

2 18 0.00031 0.025 16.2 0.9 1 23 87 109 87 109 0.95

3 18 7.4e-06 0.00058 21.4 0.4 1 23 115 137 115 137 0.97

4 18 0.073 5.8 8.8 1.1 2 20 145 163 145 165 0.92

5 18 0.0012 0.095 14.4 3.2 2 21 167 186 166 188 0.94

6 18 1.4e-05 0.0011 20.5 3.8 1 19 214 232 214 236 0.96

7 18 2.6e-05 0.002 19.7 0.6 1 23 242 264 242 264 0.98

8 18 0.00026 0.021 16.5 3.1 1 23 270 292 270 292 0.95

9 18 4e-05 0.0031 19.1 5.4 1 23 298 320 298 320 0.97

10 18 3.3e-06 0.00026 22.4 0.5 1 23 325 347 325 347 0.98

11 18 0.00014 0.011 17.3 2.2 1 23 353 375 353 375 0.97

12 18 4.3e-05 0.0034 19.0 1.8 1 20 381 400 381 403 0.93

13 18 0.035 2.8 9.8 4.6 1 23 431 454 431 454 0.98

14 18 0.00032 0.025 16.2 3.4 1 23 459 481 459 481 0.97

15 18 1.6e-07 1.3e-05 26.6 0.6 1 23 487 509 487 509 0.99

16 18 7.2e-05 0.0056 18.3 0.3 1 23 515 537 515 537 0.96

17 18 0.0034 0.27 13.0 2.6 1 23 543 565 543 565 0.97

18 18 0.00066 0.052 15.2 2.1 1 23 571 593 571 593 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.04	3.2	9.6	2.2	1	23	59	81	59	81	0.96
2	18	0.00031	0.025	16.2	0.9	1	23	87	109	87	109	0.95
3	18	7.4e-06	0.00058	21.4	0.4	1	23	115	137	115	137	0.97
4	18	0.073	5.8	8.8	1.1	2	20	145	163	145	165	0.92
5	18	0.0012	0.095	14.4	3.2	2	21	167	186	166	188	0.94
6	18	1.4e-05	0.0011	20.5	3.8	1	19	214	232	214	236	0.96
7	18	2.6e-05	0.002	19.7	0.6	1	23	242	264	242	264	0.98
8	18	0.00026	0.021	16.5	3.1	1	23	270	292	270	292	0.95
9	18	4e-05	0.0031	19.1	5.4	1	23	298	320	298	320	0.97
10	18	3.3e-06	0.00026	22.4	0.5	1	23	325	347	325	347	0.98
11	18	0.00014	0.011	17.3	2.2	1	23	353	375	353	375	0.97
12	18	4.3e-05	0.0034	19.0	1.8	1	20	381	400	381	403	0.93
13	18	0.035	2.8	9.8	4.6	1	23	431	454	431	454	0.98
14	18	0.00032	0.025	16.2	3.4	1	23	459	481	459	481	0.97
15	18	1.6e-07	1.3e-05	26.6	0.6	1	23	487	509	487	509	0.99
16	18	7.2e-05	0.0056	18.3	0.3	1	23	515	537	515	537	0.96
17	18	0.0034	0.27	13.0	2.6	1	23	543	565	543	565	0.97
18	18	0.00066	0.052	15.2	2.1	1	23	571	593	571	593	0.97

Sequence Information

Coding Sequence: atGCATAATTTCGATGCTGCAATTTCGATTCCTAGTGTACAAAATGATACCAACGAATTCGACGAATACATTAAATCAGAGCTAGCAGACTATGATCCGGAGGTTAATGGAAATGATCGAATGGAGGAAAAGGTTTCCACTGTACAAGACGAGGTAAAAAGTAATAGAAAGCTTCACAAATGTAACGTGTGTGacgaattgtttttaagcaaaaAGAACTTAAACATACACAATAAGCTTCATGTTGATAAGCTCGGCTATAAATGCAACGTTTGTGGCAAAGGATTTAAGGAAAAGCTTGGACTGAAGGAACACAAGTACTTACACACCGGAGATCGTCCTTTCAAGTGTGATGTGTGTGGTAAAGGTTTCGTGCGTAAACAGAGCCTAATGTCCCACGTGGTCCGCCACCCGAGAGATATTCCTTTACGCAAATGTGATGTGTGTGGCAGAGAATTTGATACCGATCGTTGCTTGAACGATCATTCAAAATTACTAACATGCGATATCTGTGCGAAAACGTTTTTTCAGAAGAACCACTTGATAGCACATATGAACTGTCACACTAAAATCAAGCAGAACAGAGAGGAAATAGTTGCGGATGTGTCTTCCGAGCAAGCAATCGCTTCAGTACGGCCATACAAGTGTAGCATTTGTGGAAAACGTTACACCCAGAAAAAACATCTTACCAGGCACTCCTGGAAGCATCTCATCGAACGTCCCTTCAGTTGCGAAATCTGTGGCAAAAAATTCATGTACAATCAAGACATTACCAAGCATATGCTTATACATACGAAAAATTACGATCATGTTTGTGATGTTTGTGGAAAAGGATTCTATTCGCCGTGCTACTTGAAAAGGCACAAAGTCTCCCATAGCGGCGAGCGATCGCACAAATGCACTGAATGCGATAAAGTTTTCATGGATAAATATTGTCTGAAAACACACATGCTACTTCATACAGATTCGCCGTACCAGTGTGATCTATGTGACAAAAAATTTGCCCAAAAAAGCACACTACTCGGTCATCTTCGAGCACATACCGGAGAGCGGCCTTTCAGTTGCGACATCTGTGGTAAAGATTTTCGCTTGAATAGCCATCTCAAATTTCACATGTCCATCCATACGAGAGAGTTTCTGTATAGCTGTGAGGTGTGTAAAAAAGGTTATAATACTAAATATCAATTGCGAAAACACATGCCCAAACATCAAGAACCGCTGTGCATtaggAAAAAACTGATAGAGAACAACGAGACATCCAGCAGTTCGCTCGCCGATCAGGAAAGGCCATACGAATGTGAACTCTGTGGCAGACGGTATCTTCACAAACGCCATCGCACCGCCCACATCAAGACAAATCACAGCGAGCAAAGCTTCCGTTGTGATATCTGCGATGAAACATTTCACAAAAAGTTTAGTTTTAACACACACATGCTAGCCCATACCGGTGCTTACCGGTTCAAATGCAGTGTGTGCGGTAAAGGATTCACTACTAATTCAAGCCTTATATTGCACACACGGATTCATACCGGCGAGCGACCATACGAATGTACGGTGTGCGAAAAACGTTTCCAAACGAAGGGTAACTTAGCAATGCACACCGTCATTCATTCCGGTGAACGGCCTTTCAAATGTACTGTGTGCGACAAAGACTTCACCCAACAGTGGGTCCATAAGAGGCATATGTTGCTTCACACCGGTGGTTTCCAGCACAGGTGTGACGTTTGTGATAAAGCATTTTTTACTGGGACTGAGTTGATGAAACACAAGCTGAGACATAACGACGGGACGCCACTTGTGTGA
Protein Sequence: MHNFDAAISIPSVQNDTNEFDEYIKSELADYDPEVNGNDRMEEKVSTVQDEVKSNRKLHKCNVCDELFLSKKNLNIHNKLHVDKLGYKCNVCGKGFKEKLGLKEHKYLHTGDRPFKCDVCGKGFVRKQSLMSHVVRHPRDIPLRKCDVCGREFDTDRCLNDHSKLLTCDICAKTFFQKNHLIAHMNCHTKIKQNREEIVADVSSEQAIASVRPYKCSICGKRYTQKKHLTRHSWKHLIERPFSCEICGKKFMYNQDITKHMLIHTKNYDHVCDVCGKGFYSPCYLKRHKVSHSGERSHKCTECDKVFMDKYCLKTHMLLHTDSPYQCDLCDKKFAQKSTLLGHLRAHTGERPFSCDICGKDFRLNSHLKFHMSIHTREFLYSCEVCKKGYNTKYQLRKHMPKHQEPLCIRKKLIENNETSSSSLADQERPYECELCGRRYLHKRHRTAHIKTNHSEQSFRCDICDETFHKKFSFNTHMLAHTGAYRFKCSVCGKGFTTNSSLILHTRIHTGERPYECTVCEKRFQTKGNLAMHTVIHSGERPFKCTVCDKDFTQQWVHKRHMLLHTGGFQHRCDVCDKAFFTGTELMKHKLRHNDGTPLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -