Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058071.2:116651962-116653705[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00063 0.049 15.3 1.9 2 23 129 150 128 150 0.97

2 15 2.6e-05 0.002 19.7 0.5 1 23 156 178 156 178 0.98

3 15 1.9e-05 0.0015 20.1 1.6 1 23 184 206 184 206 0.99

4 15 1.7e-05 0.0013 20.2 1.7 1 23 212 234 212 234 0.98

5 15 4.2e-07 3.3e-05 25.3 1.4 1 23 240 262 240 262 0.99

6 15 2.5e-06 0.0002 22.8 0.3 1 23 268 290 268 290 0.99

7 15 0.00058 0.046 15.4 0.3 1 23 296 318 296 318 0.93

8 15 6e-06 0.00047 21.6 1.8 1 23 324 346 324 346 0.99

9 15 0.00014 0.011 17.3 2.9 1 21 352 372 352 374 0.95

10 15 0.0016 0.12 14.0 1.0 1 21 380 400 380 402 0.95

11 15 0.00011 0.0084 17.7 0.2 1 23 410 432 410 432 0.98

12 15 0.013 1 11.1 0.2 2 23 439 461 438 461 0.91

13 15 1.4e-05 0.0011 20.5 1.7 1 23 466 488 466 488 0.97

14 15 2.3e-08 1.8e-06 29.3 3.2 1 23 494 516 494 516 0.99

15 15 0.00019 0.015 16.9 1.4 2 23 523 544 522 544 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00063	0.049	15.3	1.9	2	23	129	150	128	150	0.97
2	15	2.6e-05	0.002	19.7	0.5	1	23	156	178	156	178	0.98
3	15	1.9e-05	0.0015	20.1	1.6	1	23	184	206	184	206	0.99
4	15	1.7e-05	0.0013	20.2	1.7	1	23	212	234	212	234	0.98
5	15	4.2e-07	3.3e-05	25.3	1.4	1	23	240	262	240	262	0.99
6	15	2.5e-06	0.0002	22.8	0.3	1	23	268	290	268	290	0.99
7	15	0.00058	0.046	15.4	0.3	1	23	296	318	296	318	0.93
8	15	6e-06	0.00047	21.6	1.8	1	23	324	346	324	346	0.99
9	15	0.00014	0.011	17.3	2.9	1	21	352	372	352	374	0.95
10	15	0.0016	0.12	14.0	1.0	1	21	380	400	380	402	0.95
11	15	0.00011	0.0084	17.7	0.2	1	23	410	432	410	432	0.98
12	15	0.013	1	11.1	0.2	2	23	439	461	438	461	0.91
13	15	1.4e-05	0.0011	20.5	1.7	1	23	466	488	466	488	0.97
14	15	2.3e-08	1.8e-06	29.3	3.2	1	23	494	516	494	516	0.99
15	15	0.00019	0.015	16.9	1.4	2	23	523	544	522	544	0.96

Sequence Information

Coding Sequence: ATGTTCAGATCTGTTGAAATCAAGGAAGAACCGGAGCTATCGCAAACGAAACAAGCATTTGGTGACTATGTTTTAGAGGATAACATTCAACGCGAAGCTGCTGTTACTTCCGTCTACACAGATGGTCCGGAAAAGGACGAACTATGTCCACCGTTATTATCGCACGTCGAACGAAATCATGGAGACAACATTgtcgaaagTGTTCCAGGAGATACAGTTGCGATTGAAATGAAGGTGGAAGAAGAACTGATTGGTACAACggcaaacaacattgatgaagttGATTGCAGAATTGCGGCagaaaataatgtcgctgaaaaCAGTGAAAAGATGAACGTAGATGTTGCTAATAGCACTGATGATATTGGTCTTGCAAACCCTACCAAATGTGTCATCTGTGACCAACAGTTTGCTAAGATGTTTTATTTTAGACGGCACATGCAAACACACACCGAGGGAGCACCGTATCGTTGTGACATTTGCGGAAAAGGCTACATCGAGAAGAGTGCTTGGAAGCGGCATCAGTTTCGTCATACCGGTCAGCAACCTTTCAAGTGTGACCGTTGCGCGAAAAGTTTCGTTGACGAGTATCGTCTCAAGCTGCACATGCGAACTCATACCGGTGAACAGCTGTTCCGATGCGAGTTTTGCAATAAGGGCTATTCCGTGAAAAGCCTGCTGGTTCGACATAGGCGATCTCACACCGGCGAACGGCCGTTCAAATGTGAGATATGTggaaaaagtttttctgatcaACATTATCTGGGAATACACACGAGAGTTCACACTGGAGATCAGAAGTTCAAGTGCGAAATTTGTGGCAAAGGATACAGCTCAAATTACAAAATTGCGGCTCACATGAGGTCTCACACTGGGGAGCGTCCGTACAAATGCGATGTCTGTGATAGAACCTTTGACAGAATAAACGCACTGCGGTATCACAGTGTGGTGCACACAACTGAACAGCCTTTCAAGTGTGATACTTGCGGGAAAACATTTTCTATCATTGCACAGTTCAAGCGACATCTGAAAACTCATAGTCAGGAACGCCGCCATCAATGCAACGTTTGCGAGAAAGCATTCAGGGTCAATTCGTTGCTTGTCCAGCATATGCGTTGTCATACCGGTGAAAAACCGTTCGAATGTGAAACTTGCGGCTCATCATTCAGCTCCGTTAGTGGTCTCATCGTGCATCGGAGGTGCCACCTGAATTCATCTGAAAAACCGTACGAGTGTGACATATGCGGAGCAAAATTCGCTCTAAGAGGAAACTTCAAGACGCACCGTTTGGTTCATTCACGCGAAAGGTTCCTGAAATGTTTTTCATGTGATATACAGTTTCCCACCAACGAGGAGCTCAAGGAACACAAACTCGCTCTTCATAAAGAAAGACCATTCAAATGTACGTTGTGTGAAAAAGCCTTTTTCACCAATAAGAACCTACGGAATCATCAGGTTATCCATTCCGGTGAGAAGCACTATAAATGCCACATTTGCGATAAAAGTTTTGCGCGGTCTAGTAATCTTAGTCGTCATGTTAAATCGCATACTAGAATAATATCACTCGAGTGCCAAACATGTGGTATGAAGTTTTTCCGGAAAGGAGATCTTTCCAAACATCGAAAGGAACACACCAATGAGAAACCGCACTTTATGCTTGATTTCCTATTGTGA
Protein Sequence: MFRSVEIKEEPELSQTKQAFGDYVLEDNIQREAAVTSVYTDGPEKDELCPPLLSHVERNHGDNIVESVPGDTVAIEMKVEEELIGTTANNIDEVDCRIAAENNVAENSEKMNVDVANSTDDIGLANPTKCVICDQQFAKMFYFRRHMQTHTEGAPYRCDICGKGYIEKSAWKRHQFRHTGQQPFKCDRCAKSFVDEYRLKLHMRTHTGEQLFRCEFCNKGYSVKSLLVRHRRSHTGERPFKCEICGKSFSDQHYLGIHTRVHTGDQKFKCEICGKGYSSNYKIAAHMRSHTGERPYKCDVCDRTFDRINALRYHSVVHTTEQPFKCDTCGKTFSIIAQFKRHLKTHSQERRHQCNVCEKAFRVNSLLVQHMRCHTGEKPFECETCGSSFSSVSGLIVHRRCHLNSSEKPYECDICGAKFALRGNFKTHRLVHSRERFLKCFSCDIQFPTNEELKEHKLALHKERPFKCTLCEKAFFTNKNLRNHQVIHSGEKHYKCHICDKSFARSSNLSRHVKSHTRIISLECQTCGMKFFRKGDLSKHRKEHTNEKPHFMLDFLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -