Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058071.2:136650497-136652410[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0044 0.35 12.6 0.1 2 19 135 152 134 155 0.92

2 16 0.00027 0.021 16.4 0.2 1 23 158 181 158 181 0.96

3 16 2.4e-06 0.00019 22.9 0.2 1 23 186 208 186 208 0.98

4 16 1.1e-06 8.7e-05 24.0 0.8 1 23 214 236 214 236 0.98

5 16 0.002 0.16 13.7 0.9 2 23 244 265 243 265 0.94

6 16 9.5e-07 7.5e-05 24.2 3.3 1 23 284 306 284 306 0.99

7 16 0.099 7.8 8.4 1.7 1 23 311 333 311 333 0.96

8 16 6.4e-07 5e-05 24.7 2.0 2 23 339 360 338 360 0.98

9 16 6.2e-05 0.0049 18.4 2.1 1 23 366 388 366 388 0.99

10 16 4.1e-06 0.00032 22.2 0.3 1 23 394 416 394 416 0.97

11 16 1.8e-06 0.00014 23.3 0.7 1 23 422 444 422 444 0.99

12 16 3.8e-05 0.003 19.1 0.2 1 23 450 472 450 472 0.96

13 16 1.6e-05 0.0013 20.3 1.2 2 23 479 500 478 500 0.97

14 16 0.00016 0.013 17.1 3.3 1 21 506 526 506 528 0.96

15 16 0.00021 0.016 16.8 2.6 1 23 534 556 534 556 0.98

16 16 0.00012 0.0097 17.5 0.7 1 23 564 586 564 586 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0044	0.35	12.6	0.1	2	19	135	152	134	155	0.92
2	16	0.00027	0.021	16.4	0.2	1	23	158	181	158	181	0.96
3	16	2.4e-06	0.00019	22.9	0.2	1	23	186	208	186	208	0.98
4	16	1.1e-06	8.7e-05	24.0	0.8	1	23	214	236	214	236	0.98
5	16	0.002	0.16	13.7	0.9	2	23	244	265	243	265	0.94
6	16	9.5e-07	7.5e-05	24.2	3.3	1	23	284	306	284	306	0.99
7	16	0.099	7.8	8.4	1.7	1	23	311	333	311	333	0.96
8	16	6.4e-07	5e-05	24.7	2.0	2	23	339	360	338	360	0.98
9	16	6.2e-05	0.0049	18.4	2.1	1	23	366	388	366	388	0.99
10	16	4.1e-06	0.00032	22.2	0.3	1	23	394	416	394	416	0.97
11	16	1.8e-06	0.00014	23.3	0.7	1	23	422	444	422	444	0.99
12	16	3.8e-05	0.003	19.1	0.2	1	23	450	472	450	472	0.96
13	16	1.6e-05	0.0013	20.3	1.2	2	23	479	500	478	500	0.97
14	16	0.00016	0.013	17.1	3.3	1	21	506	526	506	528	0.96
15	16	0.00021	0.016	16.8	2.6	1	23	534	556	534	556	0.98
16	16	0.00012	0.0097	17.5	0.7	1	23	564	586	564	586	0.98

Sequence Information

Coding Sequence: ATGGATAACATCTCTGATGGTATGTTCCAAAAGGTTTGTAGCATGAGAAGTGAGAAAGCGGAGAAGTCCGCTGGATTCACTACAGGAACCATGGGCGGAGATGTGTCTTCTACTGTCATTTCCTGTCACAGAGAAGGATTCAATGGGGACGTAGTACTAATTCCAGTATTGGCAGCACAAACTCCTAGAAACTATACCGATAGCATTGCAAACGAAAGGTATTTAACGGAATTTAAGTTTCAAGATGTGGTACTATCCAACGTTGCTAATAACGGAACAGAGATGAAAGAAAAAACTGATAAAATCTGTAAATTAATAACGGAAAGTGTTACTGGATATGATTTCAACAAAGACTCGATCGAGCTAAGAGATCAAAACAGAACCACTGAGGAAAAGCTGATCAGATGCAAAGTTTGTGGAAAGGACTTCACATCGAGAGCAGGTTTTAGTGACCATTTCATTGAATGCTCGCACAAATGCTCAATATGCGGAGCACAGTTTCCTACCCGTGCTGAGATCCAGAAACATCAGATCATAGTTCACACCGAGAGTCGGTTTGAGTGTACGGTTTGCGGGACAAGTTTACGAACGAAAGCAAATCTGAGCAAACATATGATAGTGCACGGTGGGGGTAAGCCTCATCAGTGTCAAATATGTGGTCGGAGCTATCCAAGACTTGCCAGTCTTAATCGGCATATGGAGTCGCATTCACGTCTTCCTACCACTGTCAGCTGCGATGTCTGCCAAATGGTGTTTTTCACGAAGAAGGAACTCAAAGTACACCGGTTTCAGCATGAAGATGATCCAATCTTCAATACGAGTCATTTTGGTGACAAACAGGACGATCTTTTCAAATGCCACATTTGTGATAAACAGTTCGTTCAGTTGCCTTATTTTGAACGCCACATGCGAACTCATGTGGAAACGCCGTACCGTTGTGATGTTTGCGGTAAAGGCTGCCTCGGTTTAAAATCATGGAAACGGCACATGTTCAATCACACCGAGCAGTCGAACAAATGCGACGTATGTGGGAAAAGTTTCTCCGAATTTCGCAACCTTAAGCAGCATATGCGAAGACATACTGATGAACATCTGTACCGATGTGATATCTGTGATAAAGGTTATTCCGCAAGGCATTATCTTATTACGCACAGAAGATCGCACACAGGCGAACGCCCGTTCCAATGCGGTATATGTGGAAAGAGTTTTGCCAACGAATCCTATTTGAAAGGTCATGAGAAATTGCATACTATCGAAGCAAAATATCAGTGTGATATTTGTAAAAAAgaatttaatgccaaaaataatcTGGTCGTTCATATGAAAACGCACTCGGGAGATCGTCCATACAAATGTAACGTGTGTGGCAAAGGATTTACATCTATCGCTTCGTTGCGATATCATGGCAGTGTACACACAACCGAACGACCCTTGAAATGTGACCTCTGTAGTAAAACGTTCGCCCTTAGTGATCAGCTCAGGAAACATTTGCGGTATCATACAAACGAGCATGCTTATCCATGCAGTGTTTGTGAGAAAACATTCCGAATAAGTTCGCATCTAGTTAGTCACATGCGATGCCATACTGGCGAAAAACCACATAAATGCGAAATTTGTGGTTCGTCCTACAGTACCGGCAGTTACCTTGCCCATCACCGTAGAATCCatttggatccaaataataaaCAGTTTGAATGTGATGTATGCGGGGCACGGTTCACTCAAAGAAAACGGCTCAGCACTCATCGAATGGTACATTCGCAAAAAAGTGCGGATTAG
Protein Sequence: MDNISDGMFQKVCSMRSEKAEKSAGFTTGTMGGDVSSTVISCHREGFNGDVVLIPVLAAQTPRNYTDSIANERYLTEFKFQDVVLSNVANNGTEMKEKTDKICKLITESVTGYDFNKDSIELRDQNRTTEEKLIRCKVCGKDFTSRAGFSDHFIECSHKCSICGAQFPTRAEIQKHQIIVHTESRFECTVCGTSLRTKANLSKHMIVHGGGKPHQCQICGRSYPRLASLNRHMESHSRLPTTVSCDVCQMVFFTKKELKVHRFQHEDDPIFNTSHFGDKQDDLFKCHICDKQFVQLPYFERHMRTHVETPYRCDVCGKGCLGLKSWKRHMFNHTEQSNKCDVCGKSFSEFRNLKQHMRRHTDEHLYRCDICDKGYSARHYLITHRRSHTGERPFQCGICGKSFANESYLKGHEKLHTIEAKYQCDICKKEFNAKNNLVVHMKTHSGDRPYKCNVCGKGFTSIASLRYHGSVHTTERPLKCDLCSKTFALSDQLRKHLRYHTNEHAYPCSVCEKTFRISSHLVSHMRCHTGEKPHKCEICGSSYSTGSYLAHHRRIHLDPNNKQFECDVCGARFTQRKRLSTHRMVHSQKSAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -