Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058071.2:163220273-163222616[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 6.5e-06 0.00051 21.5 0.5 1 23 65 87 65 87 0.98

2 17 0.00051 0.04 15.6 1.2 1 23 93 115 93 115 0.98

3 17 3.7e-05 0.0029 19.2 2.9 1 23 121 143 121 143 0.98

4 17 0.00021 0.016 16.8 0.2 1 23 149 171 149 171 0.97

5 17 1e-06 8e-05 24.1 0.1 1 23 177 199 177 199 0.99

6 17 1e-06 8e-05 24.1 2.5 1 23 204 226 204 226 0.99

7 17 0.099 7.8 8.4 2.2 1 23 232 254 232 254 0.93

8 17 3.1e-05 0.0024 19.4 2.0 1 23 260 282 260 282 0.98

9 17 0.00076 0.06 15.0 1.1 1 23 288 310 288 310 0.96

10 17 5.4e-06 0.00042 21.8 0.5 1 23 316 338 316 338 0.97

11 17 1.9e-05 0.0015 20.1 0.5 1 23 344 366 344 366 0.98

12 17 3.2e-05 0.0025 19.4 1.5 1 23 372 394 372 394 0.98

13 17 2.8e-06 0.00022 22.7 1.0 1 23 399 421 399 421 0.99

14 17 0.00035 0.027 16.1 1.0 1 23 427 449 427 449 0.97

15 17 2.9e-05 0.0023 19.5 0.8 1 23 455 477 455 477 0.97

16 17 0.00022 0.017 16.8 0.6 1 23 483 505 483 505 0.98

17 17 0.089 7 8.5 0.3 1 10 510 519 510 522 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	6.5e-06	0.00051	21.5	0.5	1	23	65	87	65	87	0.98
2	17	0.00051	0.04	15.6	1.2	1	23	93	115	93	115	0.98
3	17	3.7e-05	0.0029	19.2	2.9	1	23	121	143	121	143	0.98
4	17	0.00021	0.016	16.8	0.2	1	23	149	171	149	171	0.97
5	17	1e-06	8e-05	24.1	0.1	1	23	177	199	177	199	0.99
6	17	1e-06	8e-05	24.1	2.5	1	23	204	226	204	226	0.99
7	17	0.099	7.8	8.4	2.2	1	23	232	254	232	254	0.93
8	17	3.1e-05	0.0024	19.4	2.0	1	23	260	282	260	282	0.98
9	17	0.00076	0.06	15.0	1.1	1	23	288	310	288	310	0.96
10	17	5.4e-06	0.00042	21.8	0.5	1	23	316	338	316	338	0.97
11	17	1.9e-05	0.0015	20.1	0.5	1	23	344	366	344	366	0.98
12	17	3.2e-05	0.0025	19.4	1.5	1	23	372	394	372	394	0.98
13	17	2.8e-06	0.00022	22.7	1.0	1	23	399	421	399	421	0.99
14	17	0.00035	0.027	16.1	1.0	1	23	427	449	427	449	0.97
15	17	2.9e-05	0.0023	19.5	0.8	1	23	455	477	455	477	0.97
16	17	0.00022	0.017	16.8	0.6	1	23	483	505	483	505	0.98
17	17	0.089	7	8.5	0.3	1	10	510	519	510	522	0.93

Sequence Information

Coding Sequence: ATGGAATTCTGCCTTGAACGAGATGGGATATTGAAACAGGAAGAACCAGAAAACAGTTCTGCAACCTTTTCTCCATCGTCCGCTCCAACAATTGATTCCCAAATAAAACTCGAATATCAGATTTATGATGAGGAATTCACACAGAAAAGCGATCTTCATAAAGACGGCTTACTACCTGAAGAGGAACAGGTTTATAGTTGCGAAATTTGCGAGAAACAATTTTCATTGAAGAATGCCCTGAAGAAGCATATGATCGTTCATACTGAAGACAAACCATTTCAGTGTAATGTGTGTGGCAAAGGATTTCAGTATTATCAGCGATTAAAGGACCACACAAATATTCACATTGGAAAGCGTCCATACAATTGCACtgtatgtgaaaaaaaattctcgtccaAAAGGATGCTTGTTCAACACATGCACATTCACACAAGCCAGCGTTCGTACAAATGCATTGTATGCGGAAAAGAATTTGCCATTAAGGGTTACTTGAATAAACATATGTCTATTCACGAAAAAGAGTACACATATACGTGCGAAGTGTGTGGCAAAGCCTTTAATGATGGTACTGACCTCGCGAGACACCAACGCATTCATACGAACGAGAAGTTTAAATGCACCATTTGCGAGAAAGAGTATTCGACAAAGTATTATCTCAGCAGACACATGAAAATACATGTAGATGATTACGAGCATAAGTGTGATGTGTGCGGCAAAGGATTCATTTGCAAATCAATTTTGAAAGACCACGAAAATATTCACACAGGTGAACGGCCTTACAATTGCACTGTCTGTGGAAAAGACTTTCATCGTAAAACAAAACTCGCAGTGCACATGCAACTTCACACAAGCGAGCAACCGCACAAATGCACCGTATGTGGGAAAGATTTTGCCATTATGGCGTACCTATCAAAACACATGCTTTTTCACATGGGTGATAATAAGCATGAGTGTGACGTGTGTGGCAAAGGATTTGTGACCAGAGCACTCTTGAAAGATCATAAACGCATTCATACAGGAGAGCGACCGTTCAAATGCACCGTATGTGAAAAAGAATTTGCCATTAAGGGTTACCTAACTAAACACATGTCTATTCACCAAAAGGAGTACAAATATAAGTGCGAAGTGTGTGGCAAAGGCTTTCATGATGGTACCAACCTCGTAAGACACAAACGCAATCATACGAACGAGAGGTTCAAATGCACCATATGCGAGAAAGATTATACCACTAAGTATGAACTCGGGAGACACATGAATATTCATGTAGATGATTACGAGCATAAGTGTGACGTATGCGGCAAAGGATTCATGACCAGATTACTCTTGCAAGACCATGAAAACAGCCATACAGGAGAGCGGCCGTACAAATGCACTGTATGTGGAAAAGATTTTGCGACTAAGTCTGCCATATCCAAACACAGGTTTATTCACGAAAGTGATTACAAGTACAAGTGTGAAGTATGTGGTAAAGGCATGAATGATAGTTCAAGCTTTGTGAGACACAAACGCCTTCATACGGATGAGATGTATAAATGCAACATATGCGGAAAAGATTTTCAAGTATTGACGTATGGACCGGTCGCGAAGCTGTCTGCCATTCGGACCGTGCTAGCAGTTGGAGTTCAACAACGCTGTATATACTACCAAATGGATGATAAGACGACATTTCTGCATGACTATGAACTGCGTGAGGAAATCTACACGGATGTTCCTGAGGACCAGAAAGCTCCTCCTGGAATGGTAGTTTCATGTACAATATGA
Protein Sequence: MEFCLERDGILKQEEPENSSATFSPSSAPTIDSQIKLEYQIYDEEFTQKSDLHKDGLLPEEEQVYSCEICEKQFSLKNALKKHMIVHTEDKPFQCNVCGKGFQYYQRLKDHTNIHIGKRPYNCTVCEKKFSSKRMLVQHMHIHTSQRSYKCIVCGKEFAIKGYLNKHMSIHEKEYTYTCEVCGKAFNDGTDLARHQRIHTNEKFKCTICEKEYSTKYYLSRHMKIHVDDYEHKCDVCGKGFICKSILKDHENIHTGERPYNCTVCGKDFHRKTKLAVHMQLHTSEQPHKCTVCGKDFAIMAYLSKHMLFHMGDNKHECDVCGKGFVTRALLKDHKRIHTGERPFKCTVCEKEFAIKGYLTKHMSIHQKEYKYKCEVCGKGFHDGTNLVRHKRNHTNERFKCTICEKDYTTKYELGRHMNIHVDDYEHKCDVCGKGFMTRLLLQDHENSHTGERPYKCTVCGKDFATKSAISKHRFIHESDYKYKCEVCGKGMNDSSSFVRHKRLHTDEMYKCNICGKDFQVLTYGPVAKLSAIRTVLAVGVQQRCIYYQMDDKTTFLHDYELREEIYTDVPEDQKAPPGMVVSCTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -