Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058072.1:19560074-19561655[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.9e-05 0.0046 18.5 3.4 2 23 44 65 43 65 0.97

2 16 0.00011 0.0084 17.7 1.4 1 23 71 93 71 93 0.97

3 16 8.3e-07 6.5e-05 24.4 0.2 1 23 99 121 99 121 0.97

4 16 9.9e-05 0.0077 17.8 0.3 1 23 127 149 127 149 0.94

5 16 6.1e-06 0.00048 21.6 0.0 2 23 156 177 155 177 0.98

6 16 4.6e-05 0.0036 18.9 1.3 2 23 184 205 183 205 0.96

7 16 1.5e-06 0.00012 23.5 1.1 2 23 214 235 213 235 0.97

8 16 3e-07 2.3e-05 25.8 0.7 1 23 240 262 240 262 0.99

9 16 0.00015 0.012 17.2 5.6 1 23 268 290 268 290 0.98

10 16 1.7e-05 0.0013 20.3 0.4 1 23 296 318 296 318 0.99

11 16 3.9e-05 0.003 19.1 2.0 1 23 324 346 324 346 0.98

12 16 0.0036 0.28 12.9 0.9 1 23 352 375 352 375 0.95

13 16 0.00027 0.022 16.4 0.6 1 19 381 399 381 403 0.94

14 16 8.9e-06 0.0007 21.1 1.7 3 23 411 431 409 431 0.95

15 16 1.6e-05 0.0013 20.3 0.3 1 23 437 459 437 459 0.99

16 16 1.8e-06 0.00014 23.3 0.9 1 23 465 487 465 487 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.9e-05	0.0046	18.5	3.4	2	23	44	65	43	65	0.97
2	16	0.00011	0.0084	17.7	1.4	1	23	71	93	71	93	0.97
3	16	8.3e-07	6.5e-05	24.4	0.2	1	23	99	121	99	121	0.97
4	16	9.9e-05	0.0077	17.8	0.3	1	23	127	149	127	149	0.94
5	16	6.1e-06	0.00048	21.6	0.0	2	23	156	177	155	177	0.98
6	16	4.6e-05	0.0036	18.9	1.3	2	23	184	205	183	205	0.96
7	16	1.5e-06	0.00012	23.5	1.1	2	23	214	235	213	235	0.97
8	16	3e-07	2.3e-05	25.8	0.7	1	23	240	262	240	262	0.99
9	16	0.00015	0.012	17.2	5.6	1	23	268	290	268	290	0.98
10	16	1.7e-05	0.0013	20.3	0.4	1	23	296	318	296	318	0.99
11	16	3.9e-05	0.003	19.1	2.0	1	23	324	346	324	346	0.98
12	16	0.0036	0.28	12.9	0.9	1	23	352	375	352	375	0.95
13	16	0.00027	0.022	16.4	0.6	1	19	381	399	381	403	0.94
14	16	8.9e-06	0.0007	21.1	1.7	3	23	411	431	409	431	0.95
15	16	1.6e-05	0.0013	20.3	0.3	1	23	437	459	437	459	0.99
16	16	1.8e-06	0.00014	23.3	0.9	1	23	465	487	465	487	0.98

Sequence Information

Coding Sequence: ATGGTTAGCGTTAAGGTCGAGCAGGACTGTCCAGAGCTTAGAGTTAGTAGCAGCTCCACAAAGTTGATAAATACTGTTACCTGCCCGGACCAAACTAATCCACCAATCGGTGAGTCTAGTCTTGACTGTCGATGTAATATTTGtggaaaacaatttatcgatAGCCATCTGTTTGCTATTCACATCAAGAAGCATTATCGTAAACCTCGACACAAATGTACGTTTTGTGAGACAGGATTTTCGTCGAAAGGGGCTCTTGCAAAACATATAACCTCTCACACAGGAGAAAAGCCCTACAAATGCGACGTATGCGGTAACGGGTTCTCTCGTGAAAGTAACCTGAGAAATCATATGGGAATTCACAATAGCGAAAAGTCACACATATGCGATGTGTGCGGTAGAGCCTTCCGGCGAGAGAAAGACTTGGCGACCCATAGTGAGGTTCACAGTAAAGAGAAATCGGTTAAATGTGATATCTGTGGCAAAGAATTGGTTCGTAGTGCTAGTCTTGCAGCACATATGAGAATTCACGTTggtgaaaaaaatctcaaatGCCATGTTTGCGGAAGAGGCTTTGTTCATTCTTCCAGTCTTGCGTATCACGTTGGAACGCATAGCGGCGAACATGCCTACCAATGGCAATGTGACGTCTGtgacaaaaagtttaccaacagCAAGAACCTATCGGAACATAAACGAGTTCATAACGAGGATTTATACAAATGTACAATTTGTGGCAAACAATATCCGTATGCAAACAATTTGAAAGATCATATGAACACACATACTGGAGAGCGAGCCTACAAATGTGATGTTTGTGGTAAGGAATTTATTAAACGCTACAATCTCAATTGTCATATGCGCCATCATACTGGCGAAAGGCCATATAAATGTGATGTATGTGGTAGGCAGTTCCTTTATAACAGTAGCCTAGAAAGGCACATCGCGACTCATAATAGCGAACGATCGCACAAGTGCGACATATGTGGCAAGCAATTTTTCCGAAATACGGATGTTATAATCCATCGGCGCATGCATACCGACGAAAAAGCACACAAATGTAATATCTGCGACAAAGCTTATCTGGATTTGCCTCGTTTGAAACGCCACATGCTTCTAAGTCACAGTGCTGAGAGACCGTTCAAATGTGATTTTTGCTCGAAAACATTCGTAGACAAAACTTCACTTGCGAATCACGCTCCGGTGCATTCCGGCGAAACACCGTTCGGCTGTGAAATCTGCGGTAAACGTTTTAAGCATCAATCGTATCTTCGAACGCATGCACTTTTGCACACGGGCGAACGTCCGTACCAGTGTGCAGTTTGTGGCAAAGGATGTATCACAAAAAGTGTACTAATCGTACACCAACGCGTTCACACTGGCGAGAAACCGTTCGAGTGTGagtattgcgaaaaaagtttcaTTAGCAAAGGATTGTTGGTACAACACAGGAGAAAGCATTCGGAGCAAATGATTTCGGAAACAATATCGTCAGTCGATGCGCAAGTAGAAGTTCGTAATGAATGA
Protein Sequence: MVSVKVEQDCPELRVSSSSTKLINTVTCPDQTNPPIGESSLDCRCNICGKQFIDSHLFAIHIKKHYRKPRHKCTFCETGFSSKGALAKHITSHTGEKPYKCDVCGNGFSRESNLRNHMGIHNSEKSHICDVCGRAFRREKDLATHSEVHSKEKSVKCDICGKELVRSASLAAHMRIHVGEKNLKCHVCGRGFVHSSSLAYHVGTHSGEHAYQWQCDVCDKKFTNSKNLSEHKRVHNEDLYKCTICGKQYPYANNLKDHMNTHTGERAYKCDVCGKEFIKRYNLNCHMRHHTGERPYKCDVCGRQFLYNSSLERHIATHNSERSHKCDICGKQFFRNTDVIIHRRMHTDEKAHKCNICDKAYLDLPRLKRHMLLSHSAERPFKCDFCSKTFVDKTSLANHAPVHSGETPFGCEICGKRFKHQSYLRTHALLHTGERPYQCAVCGKGCITKSVLIVHQRVHTGEKPFECEYCEKSFISKGLLVQHRRKHSEQMISETISSVDAQVEVRNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -