Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058072.1:21253454-21267839[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 4.5e-07 3.6e-05 25.2 0.6 1 23 48 70 48 70 0.98

2 20 0.0048 0.37 12.5 1.5 1 23 76 98 76 98 0.98

3 20 2.7e-06 0.00021 22.7 3.5 1 23 104 126 104 126 0.97

4 20 4.5e-05 0.0035 18.9 2.1 1 23 131 153 131 153 0.98

5 20 6.7e-07 5.2e-05 24.6 2.7 1 23 159 181 159 181 0.99

6 20 1.8e-05 0.0014 20.1 1.6 1 23 192 214 192 214 0.98

7 20 5.7e-05 0.0045 18.6 2.2 1 22 220 241 220 242 0.90

8 20 0.0022 0.18 13.6 4.2 1 23 248 270 248 270 0.98

9 20 0.18 14 7.6 0.1 1 16 276 291 276 293 0.84

10 20 2.8e-06 0.00022 22.7 0.5 2 23 376 397 375 397 0.97

11 20 0.00018 0.014 17.0 4.1 1 23 403 425 403 425 0.98

12 20 2.3e-06 0.00018 22.9 0.3 1 23 431 453 431 453 0.97

13 20 0.00049 0.039 15.6 0.6 1 23 459 481 459 481 0.98

14 20 0.00091 0.071 14.8 4.1 1 23 487 509 487 509 0.98

15 20 0.00029 0.023 16.4 3.9 1 23 515 537 515 537 0.97

16 20 2.3e-05 0.0018 19.8 1.9 1 23 543 565 543 565 0.99

17 20 0.00055 0.043 15.5 1.4 1 23 571 593 571 593 0.99

18 20 0.0031 0.24 13.1 0.7 1 23 599 621 599 621 0.98

19 20 1.2e-06 9.2e-05 23.9 0.2 1 23 627 649 627 649 0.99

20 20 0.00019 0.015 16.9 5.5 1 23 655 678 655 678 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	4.5e-07	3.6e-05	25.2	0.6	1	23	48	70	48	70	0.98
2	20	0.0048	0.37	12.5	1.5	1	23	76	98	76	98	0.98
3	20	2.7e-06	0.00021	22.7	3.5	1	23	104	126	104	126	0.97
4	20	4.5e-05	0.0035	18.9	2.1	1	23	131	153	131	153	0.98
5	20	6.7e-07	5.2e-05	24.6	2.7	1	23	159	181	159	181	0.99
6	20	1.8e-05	0.0014	20.1	1.6	1	23	192	214	192	214	0.98
7	20	5.7e-05	0.0045	18.6	2.2	1	22	220	241	220	242	0.90
8	20	0.0022	0.18	13.6	4.2	1	23	248	270	248	270	0.98
9	20	0.18	14	7.6	0.1	1	16	276	291	276	293	0.84
10	20	2.8e-06	0.00022	22.7	0.5	2	23	376	397	375	397	0.97
11	20	0.00018	0.014	17.0	4.1	1	23	403	425	403	425	0.98
12	20	2.3e-06	0.00018	22.9	0.3	1	23	431	453	431	453	0.97
13	20	0.00049	0.039	15.6	0.6	1	23	459	481	459	481	0.98
14	20	0.00091	0.071	14.8	4.1	1	23	487	509	487	509	0.98
15	20	0.00029	0.023	16.4	3.9	1	23	515	537	515	537	0.97
16	20	2.3e-05	0.0018	19.8	1.9	1	23	543	565	543	565	0.99
17	20	0.00055	0.043	15.5	1.4	1	23	571	593	571	593	0.99
18	20	0.0031	0.24	13.1	0.7	1	23	599	621	599	621	0.98
19	20	1.2e-06	9.2e-05	23.9	0.2	1	23	627	649	627	649	0.99
20	20	0.00019	0.015	16.9	5.5	1	23	655	678	655	678	0.95

Sequence Information

Coding Sequence: ATGACCGATCTCATGACGATTGATCAAAAACCATCCGAACTCGAACCAGCTAATGATCGGACATTCGTTTGTGACATATGCGGCAGTGGTGAAATTACTAACTTAAATCAACATTTACGGATTCATATGGCAGAGAAACCATTTAAATGTGATATCTGTGGCAAAAACTTTGCCAAGAAATACGGTCTCAAGATACACATACGTTTACATACAGGTGAAAAACCATACAAATGTGATCTTTGTAGCGAAGCATTTCTAAGAAATTATGAACTCACATATCACAAACGTAATCACACTAATGAAAAACCGCACGAATGTGAAGAATGTGGCAAACGATTCGTGCAACCCTATCATCTTACTTTACATAGACGATATCACATGGAACCAGAATATGAATGTGAATTCTGTAACAAACGGTGTGTGACAAGTAGTAACCTGGCAACTCATAGACTCATCCACACTAAAGAACGTCCGTACAAATGTGACTTCtgtgataaaaaatttaaatcatctAACAACCTGAGGCTTCACCTGAGGATTCACACAGAAGTGAAACGTAAACAATACAAATGGCACAAATGTGATATTTGTGACAAGCTTCTACGTAACGCTACCAATCTAAAGATACACTTGCGAACTCACACCGGCGAGAAACCCTACAAATGTGACATTTGCGGCAAATCATTCACAACCAAGCCTGCAATGAAGAACCATTGTGTGACCCACACCGGCGAACGGCTTCACCAATGTCAGATTTGTGACAAAGAATTTTTCACCAGTAAAAGGAAGAGGGAACACATGCGTATTCATTTGGAAGAACGGTCACACGAATGTGATATATGTGGAAAAGATTTTTTGAGGAAACAACAGCTAATTagCTTTCACCATTCATTCATCAATGCGAGTGACTTGCAACAAAACGGTTCAGCGCAGCTACAGCACTCATACCAACAGACTGAGTTACCGGCTTCGATGCAGGAAATATACACGAGCGAACAGATTGGAGAACGAACCATTCCATACATACTTGCCGACGAGCGTGCCGTATTACGTTTAATACTATTGAACCTTTCAGAAAAAGACATTCCAGAAGCCATAGTTGGAAACGTCAGTATACAACTGATTTACTGTGACATTTGTGGCAAGAGTTTTACCTCTATCGGTCACTTACTGGTTCACAGGCGAATTCACACGGGCGAGAAACCATACAAGTGCAACTATTGTGATAAAGCATTCTCCAGATGCAATGAACGTAAGCTGCATGAACGAATCCACACGGGCGAAAAGCCGTACGTCTGCGATTTGTGTGGAAAGGCTTTCACCAGAAGATCTCAGCTAGttcttcatacaatcaatcacacTGGCAAGAAACCATATGAGTGTGAAGTATGTGGCAAAGGATTCAATGAAAAGCATATCCTTACCACCCACCAGCTTATTCATTCAGACGAACGAACATTCGAATGTGATCAATGCGGCAAACGGTTCAAACTGAAGTGCAGTGTGACACAACACAAACGCATTCACATGGTCGAACGACGACACAGGTGCAAAATCTGCGGAAAAGCTTTCAACCAGAAATGCACGCTGGATATGCACCTAGGAACTCATACAAATGAAAAACATTACAAATGTGACGTTTGTGGTGTGGAGTTTTTTCACAAGAATGCAATGACTAAACACATACGGACTCACACCAGCGAGCCCAAGTTCAAATGTGAATTTTGCAGTTTAGCCTTCTTCATCAAAAGTAAACTGATTGTCCACCAACGAACTCATACTGGAGAAAAACTGTACGAGTGTGACATTTGCAACATATTTTTGTCAACCAATAGTGCACGCAACAAGCACCGGCTGAGGCACACGAATAATCGGGATTTCAAGTGTCCAATTTGTGACCGAGCATATCGTACTCCCGAAGAAGTGAAGCGACATGTGCGAAGTCATACCGAAGGACCGATACACAAGTGTGACAAATGTGATAAAACCTACAGTAGAAGATATTCGCTGACAATGCACAAGGAAAGAAAACACCAAAACCAATGTAGTTGA
Protein Sequence: MTDLMTIDQKPSELEPANDRTFVCDICGSGEITNLNQHLRIHMAEKPFKCDICGKNFAKKYGLKIHIRLHTGEKPYKCDLCSEAFLRNYELTYHKRNHTNEKPHECEECGKRFVQPYHLTLHRRYHMEPEYECEFCNKRCVTSSNLATHRLIHTKERPYKCDFCDKKFKSSNNLRLHLRIHTEVKRKQYKWHKCDICDKLLRNATNLKIHLRTHTGEKPYKCDICGKSFTTKPAMKNHCVTHTGERLHQCQICDKEFFTSKRKREHMRIHLEERSHECDICGKDFLRKQQLISFHHSFINASDLQQNGSAQLQHSYQQTELPASMQEIYTSEQIGERTIPYILADERAVLRLILLNLSEKDIPEAIVGNVSIQLIYCDICGKSFTSIGHLLVHRRIHTGEKPYKCNYCDKAFSRCNERKLHERIHTGEKPYVCDLCGKAFTRRSQLVLHTINHTGKKPYECEVCGKGFNEKHILTTHQLIHSDERTFECDQCGKRFKLKCSVTQHKRIHMVERRHRCKICGKAFNQKCTLDMHLGTHTNEKHYKCDVCGVEFFHKNAMTKHIRTHTSEPKFKCEFCSLAFFIKSKLIVHQRTHTGEKLYECDICNIFLSTNSARNKHRLRHTNNRDFKCPICDRAYRTPEEVKRHVRSHTEGPIHKCDKCDKTYSRRYSLTMHKERKHQNQCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -