Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058071.2:156259738-156266877[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00048 0.038 15.7 3.5 1 20 138 157 138 160 0.94

2 26 0.0014 0.11 14.2 2.4 1 23 166 188 166 188 0.97

3 26 6e-05 0.0047 18.5 1.3 1 23 194 216 194 216 0.97

4 26 5.6e-06 0.00044 21.8 5.2 1 23 222 244 222 244 0.97

5 26 1.4e-06 0.00011 23.6 0.2 1 23 250 272 250 272 0.98

6 26 0.00013 0.01 17.5 2.5 1 23 278 300 278 300 0.98

7 26 3.4e-06 0.00027 22.4 1.2 1 23 306 328 306 328 0.98

8 26 0.15 12 7.8 7.9 1 23 358 381 358 381 0.98

9 26 8.2e-06 0.00064 21.2 3.4 3 23 388 408 386 408 0.97

10 26 2.9e-06 0.00023 22.6 0.3 3 23 416 436 414 436 0.97

11 26 1.1e-06 8.4e-05 24.0 1.0 1 23 442 464 442 464 0.99

12 26 6.3e-05 0.005 18.4 1.9 1 23 470 492 470 492 0.98

13 26 0.00054 0.042 15.5 0.5 1 23 498 521 498 521 0.96

14 26 0.00041 0.032 15.9 0.5 3 23 545 565 543 565 0.97

15 26 3.1e-05 0.0024 19.4 1.4 1 23 571 593 571 593 0.98

16 26 6.8e-05 0.0053 18.3 0.2 1 23 599 621 599 621 0.97

17 26 5e-05 0.0039 18.8 5.2 1 23 627 649 627 649 0.97

18 26 0.0008 0.062 15.0 0.8 1 23 655 677 655 677 0.98

19 26 8.6e-06 0.00068 21.2 0.9 1 23 683 705 683 705 0.98

20 26 5e-05 0.0039 18.7 1.4 1 23 711 733 711 733 0.98

21 26 0.44 34 6.3 6.7 1 23 750 773 750 773 0.94

22 26 7.8e-07 6.2e-05 24.4 1.5 2 23 779 800 778 800 0.95

23 26 0.00041 0.033 15.9 4.2 1 23 806 828 806 828 0.98

24 26 1.8e-05 0.0014 20.2 2.3 1 23 834 856 834 856 0.97

25 26 0.00019 0.015 16.9 1.5 1 23 862 884 862 884 0.98

26 26 0.019 1.5 10.6 3.6 1 23 890 913 890 913 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00048	0.038	15.7	3.5	1	20	138	157	138	160	0.94
2	26	0.0014	0.11	14.2	2.4	1	23	166	188	166	188	0.97
3	26	6e-05	0.0047	18.5	1.3	1	23	194	216	194	216	0.97
4	26	5.6e-06	0.00044	21.8	5.2	1	23	222	244	222	244	0.97
5	26	1.4e-06	0.00011	23.6	0.2	1	23	250	272	250	272	0.98
6	26	0.00013	0.01	17.5	2.5	1	23	278	300	278	300	0.98
7	26	3.4e-06	0.00027	22.4	1.2	1	23	306	328	306	328	0.98
8	26	0.15	12	7.8	7.9	1	23	358	381	358	381	0.98
9	26	8.2e-06	0.00064	21.2	3.4	3	23	388	408	386	408	0.97
10	26	2.9e-06	0.00023	22.6	0.3	3	23	416	436	414	436	0.97
11	26	1.1e-06	8.4e-05	24.0	1.0	1	23	442	464	442	464	0.99
12	26	6.3e-05	0.005	18.4	1.9	1	23	470	492	470	492	0.98
13	26	0.00054	0.042	15.5	0.5	1	23	498	521	498	521	0.96
14	26	0.00041	0.032	15.9	0.5	3	23	545	565	543	565	0.97
15	26	3.1e-05	0.0024	19.4	1.4	1	23	571	593	571	593	0.98
16	26	6.8e-05	0.0053	18.3	0.2	1	23	599	621	599	621	0.97
17	26	5e-05	0.0039	18.8	5.2	1	23	627	649	627	649	0.97
18	26	0.0008	0.062	15.0	0.8	1	23	655	677	655	677	0.98
19	26	8.6e-06	0.00068	21.2	0.9	1	23	683	705	683	705	0.98
20	26	5e-05	0.0039	18.7	1.4	1	23	711	733	711	733	0.98
21	26	0.44	34	6.3	6.7	1	23	750	773	750	773	0.94
22	26	7.8e-07	6.2e-05	24.4	1.5	2	23	779	800	778	800	0.95
23	26	0.00041	0.033	15.9	4.2	1	23	806	828	806	828	0.98
24	26	1.8e-05	0.0014	20.2	2.3	1	23	834	856	834	856	0.97
25	26	0.00019	0.015	16.9	1.5	1	23	862	884	862	884	0.98
26	26	0.019	1.5	10.6	3.6	1	23	890	913	890	913	0.95

Sequence Information

Coding Sequence: ATGCATGGTTTCGATGTGGCAAATTTAGTTAAACGCGAAAAGGATGAAAACGATGAATTCAGAGGAAACCTTAAAACAGAACCGCCTGAACACGATGCACAAAGTAATGAATCCTCTCTACGTGAGGAAAAAGTCTGCATAATACAAGACGAAGCGAAAAACAGCGAACTGGTCAAAGTGAACGATAATGAAAAACCGGTCAAATGCATCGATCACAAAAACTTCCAGACTTTATCAAACAATTCGAGTCCCAACACAGACATGGTAGCATATCACGGTCTACAGCAAATCAATGGCGAAATCTGTGCAAAAACAAATCAGAATCTTTTGAAAGAGACCGTTCATACTGAAACCGCACAGAGCAGGGAGCAACACGCACAAGAAACGTCTTCCGACGATTTGATCCGACCCTACAAATGCGACATTTGCAATAAACGTTACGTCCATAAAAGGCATCTTAACGTGCACGTCTGGAAACATCGTAACGAACGCCCATTCAGTTGCGAAATCTGTGGCAGAAAGTTTGCTCTCAAACAATGTGTTACCAAGCACATGTTTGTTCATACTAGAAACTTCGATCACGTTTGCGATGTGTGTGGCAATGGATTTACTTCACTTTCCTATTTAAAAAGACACAAAATCACTCATACTCTGGACCGACCCCACAAATGCACGGAATGCAACAAAGCATTTAGGCATAAGAATAATCTTAAAATACACATGTTACTTCATGCAAGCGATCGTCCGTACCAGTGTGATCTGTGTGGCAAAACATTTGTGCAAAAGATATATCTTATCGATCACATCCGAGCACATAACGGCGAACGGCCTTTTAAATGCGAAGTTTGCGCTAAAGACTTCCGCTATAACCATGCACTTAAATCACACATGTCCTCTCATACGGGAATATTCCTATATAGCTGTGAGGTGTGTGATAAAGGCTTTAATACCAGGGCTCATTTGGATAAACACATGCTCAGTCATGACAGTGAAGTGAAAACGACAAAGAACGATGTGGAGGACGACAGTTCAATGACTAGTTCCATCCTGACCATCGATTCCGGAAAGTCATACGAATGTGAGCTTTGTGGCAAACGATTCCTCCGCAAACACCACTGCAGCAAACACATAAAAACAGATCACGAAGGTCGGCGCTTCGGTTGCAATGTCTGCGGCAAAACCTTCACCAAACGGTTTCATCTAAACAGACATATGTTTGTTCATACGGGTGAATTTCCGTTGGCATGCGAAGAGTGCGGCAAAGGATTCACGTCTAATTTTTCCTTGAAGGGACACATGCGTAGTCATACCGGTGAGCGACCGTACAAATGTACTGTTTGTGGAAAAGGTTTCCCTATGAAGAATAATTTAACTACGCACATGTACACTCATGCCACTGAACGTCCTTTCAAATGTACCGTGTGCGACAAAGATTTTACTCAAAAACAGATCCTAGAAAGGCACATGTTCACCCATACGGGTGATTTCCGGTTCAGGTGTGAAATTTGTGGTAAAGGATTTCCCGCCAATTATTTTCTACTGAAGCACAACAAGCGCGTGCACCCCGAAAAtgagcaaattTTGCAACAGGCGACTTCCGAACAAACGGCCACTTCTGAACAACCATACGGGTGTAACGTTTGTGGCAAGCAGTACATCTATAGAAAAAGTCTTTCCAAACATGTCTTGACACACTGCAGCGAACGTCCATTCAGTTGTGAAATTTGTGGCAAAACGTTTATGTTTAAGCAAAGCGTTTCCAAACATATGCTTACTCACACGCAAAACTACGATTACGCGTGTGATGTATGTGGGAAAGGAGTCTCGTCACGGTACTATTTAGAAAAGCATAAAATAACTCACACCGGCGAGCGGCCGCACAAATGCACGGAATGCGACAAAACCTTTATGCATAAATATAATCTAAATTTACACCTACTACTTCACAAAGGGCGTTCTCCGTATCAGTGTGATATGTGTGGCAAAAAATTTCTACAAAAGGTCTACCTTATCGATCACTTCCGAGCGCATCGCGGCGACCGACCTTTCAAATGCGAAATCTGTGGTAAAGAGTACCGTTTCAGAATTCAACTCAAATCACACATGTCCATCCATACGGGTGAATATCTGTATAGCTGTGAGGTGTGTAGAAAAGGTTATAACACTAAATTTGAGTTGAACAAACACATGCTCAATCACAACAGTGAAGTGAAAAGTTCCATTAAGACGTTCGAATCCTCAAGGTCATACAAATGTGAGCTTTGTGACAAACGATTCCTGCGCAAACACCACTGTATCGAGCATATGAAGGCAGAACACGGAGACCAGCGTTGCAATTGCGAAATCTGCGGTAAAGAGTTTTCTAAAAAGTCTAATCTGAATGCACATATGGTTTCTCATACGGGTGCATTCCGGTTCAAATGTGAATTGTGCCATAAAGCATTCAACTCTAATTCCAAGTACAAAGTGCACAAAGTTACGCATTCCGGTGAGCGACCGCACCAGTGTACTGTGTGCGGAAAAGGTTTCACCATGAAGAATAGCTTGACTACACACATGTTTATTCATTCCGGTGAACGGCCGTTCAAATGTACCGTGTGCGATAAAGATTTCAACCAGAAACAGATCCTAGCAAGGCACATGTTTACGCATACGGGCGATTTTCGACACAAATGCGATATTTGTGGTAAAGGATTCTTCTGCAATAGTTTCCTAGTGAAACACATGGTCGTCAAACATACCGAAAAAGAACAGCGtatgtga
Protein Sequence: MHGFDVANLVKREKDENDEFRGNLKTEPPEHDAQSNESSLREEKVCIIQDEAKNSELVKVNDNEKPVKCIDHKNFQTLSNNSSPNTDMVAYHGLQQINGEICAKTNQNLLKETVHTETAQSREQHAQETSSDDLIRPYKCDICNKRYVHKRHLNVHVWKHRNERPFSCEICGRKFALKQCVTKHMFVHTRNFDHVCDVCGNGFTSLSYLKRHKITHTLDRPHKCTECNKAFRHKNNLKIHMLLHASDRPYQCDLCGKTFVQKIYLIDHIRAHNGERPFKCEVCAKDFRYNHALKSHMSSHTGIFLYSCEVCDKGFNTRAHLDKHMLSHDSEVKTTKNDVEDDSSMTSSILTIDSGKSYECELCGKRFLRKHHCSKHIKTDHEGRRFGCNVCGKTFTKRFHLNRHMFVHTGEFPLACEECGKGFTSNFSLKGHMRSHTGERPYKCTVCGKGFPMKNNLTTHMYTHATERPFKCTVCDKDFTQKQILERHMFTHTGDFRFRCEICGKGFPANYFLLKHNKRVHPENEQILQQATSEQTATSEQPYGCNVCGKQYIYRKSLSKHVLTHCSERPFSCEICGKTFMFKQSVSKHMLTHTQNYDYACDVCGKGVSSRYYLEKHKITHTGERPHKCTECDKTFMHKYNLNLHLLLHKGRSPYQCDMCGKKFLQKVYLIDHFRAHRGDRPFKCEICGKEYRFRIQLKSHMSIHTGEYLYSCEVCRKGYNTKFELNKHMLNHNSEVKSSIKTFESSRSYKCELCDKRFLRKHHCIEHMKAEHGDQRCNCEICGKEFSKKSNLNAHMVSHTGAFRFKCELCHKAFNSNSKYKVHKVTHSGERPHQCTVCGKGFTMKNSLTTHMFIHSGERPFKCTVCDKDFNQKQILARHMFTHTGDFRHKCDICGKGFFCNSFLVKHMVVKHTEKEQRM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -