Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058071.2:125505625-125508075[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 6.5e-05 0.0051 18.4 0.8 1 23 65 87 65 87 0.98

2 27 2.4e-05 0.0019 19.7 1.1 1 23 93 115 93 115 0.98

3 27 0.00012 0.0095 17.5 0.2 1 23 121 143 121 143 0.97

4 27 4.2e-06 0.00033 22.1 0.7 1 23 149 171 149 171 0.98

5 27 3.2e-05 0.0025 19.4 0.9 1 23 176 198 176 198 0.94

6 27 6e-06 0.00047 21.6 1.2 2 23 204 225 203 225 0.97

7 27 0.0027 0.21 13.3 3.0 1 23 231 253 231 253 0.98

8 27 0.00075 0.059 15.1 2.9 1 23 259 281 259 281 0.99

9 27 3.2e-05 0.0025 19.3 0.1 1 23 287 309 287 309 0.99

10 27 5.8e-06 0.00046 21.7 1.5 1 23 315 337 315 337 0.96

11 27 0.0055 0.43 12.3 0.2 1 23 343 365 343 365 0.96

12 27 6.1e-05 0.0048 18.5 1.3 1 23 371 393 371 393 0.99

13 27 2e-06 0.00016 23.1 0.5 1 23 398 420 398 420 0.98

14 27 0.00054 0.042 15.5 0.7 1 23 426 448 426 448 0.97

15 27 0.00011 0.0084 17.7 4.3 1 23 454 476 454 476 0.98

16 27 3e-05 0.0024 19.4 1.7 1 23 482 504 482 504 0.98

17 27 4e-05 0.0032 19.0 1.0 1 23 510 532 510 532 0.97

18 27 5.8e-05 0.0045 18.5 1.6 1 23 538 560 538 560 0.98

19 27 6e-05 0.0047 18.5 0.1 1 23 566 588 566 588 0.98

20 27 1.9e-05 0.0015 20.1 0.5 1 23 594 616 594 616 0.97

21 27 0.095 7.4 8.4 2.1 1 21 622 642 622 644 0.91

22 27 0.00015 0.012 17.3 0.0 1 23 650 672 650 672 0.98

23 27 2.2e-06 0.00018 23.0 1.1 1 23 678 700 678 700 0.98

24 27 0.0013 0.1 14.3 2.8 1 21 706 726 706 728 0.96

25 27 8.2e-05 0.0064 18.1 0.1 1 23 734 756 734 756 0.98

26 27 0.0015 0.12 14.1 2.4 1 23 762 784 762 784 0.98

27 27 0.0017 0.13 14.0 1.0 1 23 790 812 790 812 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	6.5e-05	0.0051	18.4	0.8	1	23	65	87	65	87	0.98
2	27	2.4e-05	0.0019	19.7	1.1	1	23	93	115	93	115	0.98
3	27	0.00012	0.0095	17.5	0.2	1	23	121	143	121	143	0.97
4	27	4.2e-06	0.00033	22.1	0.7	1	23	149	171	149	171	0.98
5	27	3.2e-05	0.0025	19.4	0.9	1	23	176	198	176	198	0.94
6	27	6e-06	0.00047	21.6	1.2	2	23	204	225	203	225	0.97
7	27	0.0027	0.21	13.3	3.0	1	23	231	253	231	253	0.98
8	27	0.00075	0.059	15.1	2.9	1	23	259	281	259	281	0.99
9	27	3.2e-05	0.0025	19.3	0.1	1	23	287	309	287	309	0.99
10	27	5.8e-06	0.00046	21.7	1.5	1	23	315	337	315	337	0.96
11	27	0.0055	0.43	12.3	0.2	1	23	343	365	343	365	0.96
12	27	6.1e-05	0.0048	18.5	1.3	1	23	371	393	371	393	0.99
13	27	2e-06	0.00016	23.1	0.5	1	23	398	420	398	420	0.98
14	27	0.00054	0.042	15.5	0.7	1	23	426	448	426	448	0.97
15	27	0.00011	0.0084	17.7	4.3	1	23	454	476	454	476	0.98
16	27	3e-05	0.0024	19.4	1.7	1	23	482	504	482	504	0.98
17	27	4e-05	0.0032	19.0	1.0	1	23	510	532	510	532	0.97
18	27	5.8e-05	0.0045	18.5	1.6	1	23	538	560	538	560	0.98
19	27	6e-05	0.0047	18.5	0.1	1	23	566	588	566	588	0.98
20	27	1.9e-05	0.0015	20.1	0.5	1	23	594	616	594	616	0.97
21	27	0.095	7.4	8.4	2.1	1	21	622	642	622	644	0.91
22	27	0.00015	0.012	17.3	0.0	1	23	650	672	650	672	0.98
23	27	2.2e-06	0.00018	23.0	1.1	1	23	678	700	678	700	0.98
24	27	0.0013	0.1	14.3	2.8	1	21	706	726	706	728	0.96
25	27	8.2e-05	0.0064	18.1	0.1	1	23	734	756	734	756	0.98
26	27	0.0015	0.12	14.1	2.4	1	23	762	784	762	784	0.98
27	27	0.0017	0.13	14.0	1.0	1	23	790	812	790	812	0.98

Sequence Information

Coding Sequence: ATGGAATTTTGCCTTGAACGAGATGGAATTGTAAAAGAGGAAGAACCAGAAAACGATCCTGTCACCGTTTTCCTATCGTCTACTCTAACAATCGATTTTCCAATCAAACTTGAAAATCAGATTTGTGATGAGGAAGCTACACAGAAAAGTGATCTTCCCGAAAACGTTTTAGTACCTAAAGGGAAACCGGTTTATAGTTGCGAACTTTGCGgggaacatttttcaatgatgaAAGCCCTGAACAAGCATATGCTCGTTCATACTGAAGACCAACAATTTAAGTGTAATGTGTGTGGCAAAGATTTTCGGTATTATCAGCAACTAAAGGACCACGCGAATATTCACACTGGTGAGCGTCCGTACAATTGCACTGTATGCGAAAAAAACTTCGCGTCTAAACCGATGCTTGTTCAACACATGCTCCTTCACACAAGCCAGCGTTTGTACAAATGCACCGTATGCGGAAAAGAATTTATCATTAAAAATTACTTAACTAGACACATGTCTATTCACAGTGAGTACAAACATAATTGCGAAGTGTGTGGCAAAGCctttagtaatggttataacttAACGAAACACAAAGGCATTCACACAAACGAAAAGTCTAAATGTACCATATGCGGGAAAGAATTTAACACTAAGCGTAGTCTCGGCAGACACCTGAAAATTCACGTGGATGATTACGAGCATAAGTGTGATGTATGCGGCAAAGGATTTATCTGTAAATCCCTTTTGCAGgaccacaaaaatattcacacagGTGAGCGGCCTTACAAATGCACTGCATGCGGAGAAGACTTTCATCAGAGAAGAAAACTTACAGAACACATGCAACGTCATACAAGCGAGCGACCGTACAAATGCACCGTTTGTGGAAAAGATTTTATCGTTATGGCCTACCTAACTGCACACCTGCTTACCCACACGAATGCTAGAAGGCATGAGTGTAATGTGTGTGGTAAAGTATTTGTGACCAGAGCATACTTGAAAAACCATGAACGTTTTCATACAGGAGAGCGACCGTTCAAATGTATTGTCTGTGAAAAAGCATTTGTCCTTAAGGGTTCTTATATTAAACACATGTCTATTCACCAGAGTGTGCACAAATATAAATGCGAAGAGTGTGGCAAAGGCTTTCATAATGGTAGTGGCTTCGCGAGACACAAACGCATTCATACGAACGAGAAGTTTAAATGCACCATATGCGAGAAAGGATATACCTCCGAGTATGAACTCAGAAGACACATGATTATTCATGCAGATGATTACGAGCATAAGTGTGAGGTGTGCGGCAAAGGATTCATCGCCAGAAGACTCTTGAAAGACCATGAAAACAGTCATACAGGAGAGCGACCGTACAAATGCACTGTATGCGGAAAAGACTTTCATGGTAAAATTCATCTTTCTCGTCACATGCAAAATCACACAAGCGAGCGACCGTACAAATGCACCGTATGTGGGAAAGATTTCGTCTTGATGACTTACCTAACCAAACACATGCGTTTTCACACGAATGATTACAGGTATGAGTGTGATGTGTGTGGCAAAGGATTCATGACCAGATCACTCTTGAAAGATCATGAACACAGCCATAGAGGCGAGCGACCATACGAATGCACCGTATGTGGAAAAGATTTTCAAGGTAAACTAAATCTTACTCTACACATGCGCCATCACACAAGCGAGCGACCGTACAAATGCACCGTATGTGGAAAAGATTTTGCCATTCTGTCTTCCCTAACCGGACATATGACTATTCATGATAATAGCTACAAACATAAGTGTGATGTATGCGGCAAAGGATTCGGAAGCAGTTCACTCTTGAAAGACCACGAAAACATTCATACAGGAGAGCGACCATACAAATGCACTGTATGTGGAAAAGATTTTCAAGCTAAACGAATTCTTGTTAAACACATCCGCTGTCACCCAAGCGAGAGACCGTACAAATGTACCGTATGTGGAGAAGATTTTGCCATTCAGTCTTCCCTAATCGGACATATGACTATTCATGAAAAAGGTTACAAACATAAGTGTGATGTATGCGGCAAAGAATTCGGAAGAAATTCACTCTTGAAAGACCACCAAAACATTCATACAGGAGAGCGACCATACAAATGCACTGTATGTGGAAAAGATTTTCAATCTAAACGAGTTCTTGTTAAACACATCCGCTGTCACACAAGCGAGAGACCGTACAAATGTACCGTATGTGGAGAAGATTTTGCCATTCAGTCTTCCCTAACCGGACATATGACTATTCATGAAAATAGCTACAAACATAAGTGTGATGTATGCGGCAAAGGATTCGGATGCAGTTCACTCTTGAAAGACCACCAAAACATTCATACAGGAGAGCGACCATACAAATGCACTGTATGTGGAAAAGATTTTCAAGCTAAACGAGTTCTTGTTAAACACAAACGCCTTCATACGGACGAGAAGTAG
Protein Sequence: MEFCLERDGIVKEEEPENDPVTVFLSSTLTIDFPIKLENQICDEEATQKSDLPENVLVPKGKPVYSCELCGEHFSMMKALNKHMLVHTEDQQFKCNVCGKDFRYYQQLKDHANIHTGERPYNCTVCEKNFASKPMLVQHMLLHTSQRLYKCTVCGKEFIIKNYLTRHMSIHSEYKHNCEVCGKAFSNGYNLTKHKGIHTNEKSKCTICGKEFNTKRSLGRHLKIHVDDYEHKCDVCGKGFICKSLLQDHKNIHTGERPYKCTACGEDFHQRRKLTEHMQRHTSERPYKCTVCGKDFIVMAYLTAHLLTHTNARRHECNVCGKVFVTRAYLKNHERFHTGERPFKCIVCEKAFVLKGSYIKHMSIHQSVHKYKCEECGKGFHNGSGFARHKRIHTNEKFKCTICEKGYTSEYELRRHMIIHADDYEHKCEVCGKGFIARRLLKDHENSHTGERPYKCTVCGKDFHGKIHLSRHMQNHTSERPYKCTVCGKDFVLMTYLTKHMRFHTNDYRYECDVCGKGFMTRSLLKDHEHSHRGERPYECTVCGKDFQGKLNLTLHMRHHTSERPYKCTVCGKDFAILSSLTGHMTIHDNSYKHKCDVCGKGFGSSSLLKDHENIHTGERPYKCTVCGKDFQAKRILVKHIRCHPSERPYKCTVCGEDFAIQSSLIGHMTIHEKGYKHKCDVCGKEFGRNSLLKDHQNIHTGERPYKCTVCGKDFQSKRVLVKHIRCHTSERPYKCTVCGEDFAIQSSLTGHMTIHENSYKHKCDVCGKGFGCSSLLKDHQNIHTGERPYKCTVCGKDFQAKRVLVKHKRLHTDEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -