Basic Information

Insect: Malaya genurostris
Gene Symbol: -
Assembly: GCA_030247185.2
Location: CM058071.2:164198131-164205705[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.035 2.8 9.8 2.6 1 23 25 47 25 47 0.97

2 28 0.00017 0.013 17.1 0.5 2 23 54 75 53 75 0.95

3 28 8.7e-05 0.0068 18.0 2.8 1 23 81 103 81 103 0.98

4 28 2.5e-06 0.00019 22.9 0.7 1 23 109 131 109 131 0.98

5 28 4.6e-05 0.0036 18.9 0.3 1 23 159 181 159 181 0.97

6 28 4.1e-06 0.00032 22.2 1.2 1 23 186 208 186 208 0.98

7 28 0.00034 0.026 16.1 1.0 1 23 214 236 214 236 0.98

8 28 2.7e-05 0.0021 19.6 0.3 2 23 243 264 242 264 0.97

9 28 0.00012 0.0096 17.5 0.3 1 23 280 302 280 302 0.97

10 28 0.0087 0.68 11.7 0.2 1 23 308 330 308 330 0.98

11 28 2.2e-05 0.0017 19.9 0.6 1 23 336 358 336 358 0.98

12 28 0.00049 0.039 15.6 3.5 1 23 364 386 364 386 0.94

13 28 3.7e-05 0.0029 19.2 1.1 2 23 393 414 392 414 0.97

14 28 9.3e-07 7.3e-05 24.2 1.3 1 23 514 536 514 536 0.97

15 28 0.00065 0.051 15.2 1.4 1 23 542 564 542 564 0.96

16 28 6.8e-07 5.3e-05 24.6 1.1 1 23 570 592 570 592 0.98

17 28 0.00057 0.045 15.4 0.7 1 23 598 620 598 620 0.98

18 28 9.8e-05 0.0077 17.8 1.4 1 23 660 682 660 682 0.98

19 28 4.7e-06 0.00037 22.0 0.8 1 23 688 711 688 711 0.97

20 28 4e-06 0.00031 22.2 0.4 1 20 717 736 717 739 0.96

21 28 0.0053 0.41 12.4 0.2 2 23 746 767 745 767 0.94

22 28 7.8e-05 0.0061 18.1 0.6 1 23 791 813 791 813 0.98

23 28 0.00013 0.01 17.4 0.5 1 23 819 841 819 841 0.98

24 28 7.3e-06 0.00057 21.4 3.0 1 23 847 869 847 869 0.98

25 28 1.8e-05 0.0014 20.1 2.6 1 23 875 897 875 897 0.98

26 28 0.00053 0.041 15.5 0.4 1 23 903 925 903 925 0.95

27 28 0.00042 0.033 15.8 0.4 1 23 931 953 931 953 0.97

28 28 0.0053 0.42 12.4 0.5 2 23 960 981 959 981 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.035	2.8	9.8	2.6	1	23	25	47	25	47	0.97
2	28	0.00017	0.013	17.1	0.5	2	23	54	75	53	75	0.95
3	28	8.7e-05	0.0068	18.0	2.8	1	23	81	103	81	103	0.98
4	28	2.5e-06	0.00019	22.9	0.7	1	23	109	131	109	131	0.98
5	28	4.6e-05	0.0036	18.9	0.3	1	23	159	181	159	181	0.97
6	28	4.1e-06	0.00032	22.2	1.2	1	23	186	208	186	208	0.98
7	28	0.00034	0.026	16.1	1.0	1	23	214	236	214	236	0.98
8	28	2.7e-05	0.0021	19.6	0.3	2	23	243	264	242	264	0.97
9	28	0.00012	0.0096	17.5	0.3	1	23	280	302	280	302	0.97
10	28	0.0087	0.68	11.7	0.2	1	23	308	330	308	330	0.98
11	28	2.2e-05	0.0017	19.9	0.6	1	23	336	358	336	358	0.98
12	28	0.00049	0.039	15.6	3.5	1	23	364	386	364	386	0.94
13	28	3.7e-05	0.0029	19.2	1.1	2	23	393	414	392	414	0.97
14	28	9.3e-07	7.3e-05	24.2	1.3	1	23	514	536	514	536	0.97
15	28	0.00065	0.051	15.2	1.4	1	23	542	564	542	564	0.96
16	28	6.8e-07	5.3e-05	24.6	1.1	1	23	570	592	570	592	0.98
17	28	0.00057	0.045	15.4	0.7	1	23	598	620	598	620	0.98
18	28	9.8e-05	0.0077	17.8	1.4	1	23	660	682	660	682	0.98
19	28	4.7e-06	0.00037	22.0	0.8	1	23	688	711	688	711	0.97
20	28	4e-06	0.00031	22.2	0.4	1	20	717	736	717	739	0.96
21	28	0.0053	0.41	12.4	0.2	2	23	746	767	745	767	0.94
22	28	7.8e-05	0.0061	18.1	0.6	1	23	791	813	791	813	0.98
23	28	0.00013	0.01	17.4	0.5	1	23	819	841	819	841	0.98
24	28	7.3e-06	0.00057	21.4	3.0	1	23	847	869	847	869	0.98
25	28	1.8e-05	0.0014	20.1	2.6	1	23	875	897	875	897	0.98
26	28	0.00053	0.041	15.5	0.4	1	23	903	925	903	925	0.95
27	28	0.00042	0.033	15.8	0.4	1	23	931	953	931	953	0.97
28	28	0.0053	0.42	12.4	0.5	2	23	960	981	959	981	0.96

Sequence Information

Coding Sequence: ATGGCTGATAATAATACGAAATCATCTGAAAGCTTCCCGACCGTTCCTTCCATATCGACAATCGGTTCCGCACACGAATGCGTGCTTTGTAGTAGGACATTTCTCACGAAACAGCAGCTGATCAAACACAAACGCGCCCATGGCGAGAAATTATCGTCAAGCTGCGAAGTATGCGGTAAAACTTTTTCCAGTAGGAATAGCTTACTTGGCCATCGGTATGTCCATACCAGTGAACGTCCGCACAAGTGCACATATTGTAATAAGGATTTTACCGTCAAAGCCAGACTAACCAAACACATATTGATACATACGGATGAATATCCATTCCGATGTGATGTATGTGGCAAAGGATTTATGAATAATAATCAACTTGAAAGACACAAACGAGTTCATACTGGTGAGCCAACGACCGGTGAAGATAAACTGCCAACTAACAATGAAGAGAGCAACGTAAACACAACATGCGGATTTGTGTACGATTGTGAGCTTTGCGGCAAACAATTTAGTACCAAAAAGCGCCTCGCTGCACACGGCCGGATACATAGAGGCAAACCTTTCGTGTGTAATATTTGTGACAGAGCATTCTACAAGAGTAACAACCTAATCCGTCATCAATTCACCCACACTGGAGATCGTCCCTACAAGTGCAATTTGTGCGATAAAGAATACATATGCAACAGTAACCTGGTCGCGCATATGTCTGTTCATACAGGAGACTATCGGCTGAAGTGCGATGTGTGTGGCAAAGGATTCAATTTTGGTTCTCTTCTCAAGGAGCACTTACGTACACACTCGAGTGAACAATCAAATGACAATCAACCAAACGACCAACAGCCGTACATATGTAGTGTATGTGGCAAAAGATTAGCCAGTAAAAGAAGCCTAAATTTACACATGTCGCTTCATACGGGAAATTTTCCCTATAGATGTGAAGTGTGTGGTCAAGGATTCTATGCCGGTAATACTTTAAGGGAACACACGCGGCTTCATACTGGCGAATCGATGTTCATGTGCACCATGTGCGGTAAAGATTTAGCCAGCAAGAGGAACCTCAAAAATCACATGTCGGTTCATACAAATGTCTATCAGCATAGATGTGATATGTGTGACAAAGGATTTAACACGCTCCATAATTTGAAGTTGCACAGAGTTCTTCACACCGGTGAAGCGAAAACAAAGTGCACTGTGTGCGGCAAAGAGTTTAACAAAGAAAGATACCTCGTCCGTCACATGACGATGCATACAAAGGATTATCCCCATACATGTGATATCGATTCTAAGGTAAAGAACTTTGATCTACCAGAACCTCACTTCCCCAGTTTAAACGCTGGAACCGATAATATGAAACTGTATGATACGAAAATAAATGAATTACTAGACATCAAAGTTCAAGAAGTTTCGAATACAAATCGtggttctgaaaatgaaaacaatctCGTTCCCGAAGGATCAAATTTTGAGCAACCCATGATCGATTCCGGGGTGTTTAGCAGCATTGGAACAACGTCTTCAACGTCTCCCGATACTTCCACACGACCTCATGAATGCGAGTATTGTGGTAAACGATTTGGCTCGAAGAGCAATCTTGCCCGACACGAACGTGGCCATCGGGGAGAAAAACCGTTCAGTTGCGATATCTGCCACAAGGGGTTTGCAGAAAAACGCTCGGTTCAACGTCATCAATCTGCACACACCGGTGTGCGACCATTTAAATGCAATATGTGTGGCAAAAATTTCGCTCAGAAAAGGAACCTGAGCGACCATATGTCTGTTCATACGAATGAATATAGGCATCAATGTGATGTTTGTGGCAAAGGGTTCAACGCAATTTATCTACTAGAGGAACACAAACGCCGGCATAATACCGTGCCGACGaagaaGAAGAATATTGGGATAGTCTACTACTTGCAAGGTAAAGAGAATTCATCGGTTACGCCGCCGACCACACCCGACACTGCCACCGACTCCATACGGCGATACGAGTGCGATTTTTGTGGTAAACGGTATGTGAAACGGTATCAGCTTGCTGAACATTTCCGCTCACACAGCGGTGAACGTCCTTTTACTTGCGATGTCTGTGGCAAGACATTCTCGGGGAGTGGTTCGCTGTCGCGCCATCGAAAAAATTCCCATGCTACCGAGCGGCCGTACAAATGCACCGTGTGCGATAGAGCGTTTGTAGTTAAAAGTAATTTAACTAAACATATGCCCCTTCATACGGGCGATTATCCACTTACATGTGATGTTTGTGGAAAGGGATTCAATACAGCCTTCCGACTTGGAAAACATAAGCTTGCTCATATTAGTGATCCGACACTCGGaacggaAAAAAGGATCAGAAAACCAAGAAAGAGGAAGGCAGTTACCGTACATAAATGCGAAACATGTGGCAAGGTACTCACCAATAAATGGTCACTTGTCCTGCACCTTCGAGCGCATAATGGAGAGAGACCCTACAGTTGCGAAATCTGTGGTATGAAATTCAGTAGTAGTAGCGCTGTTGGGCGCCATCGATTTACCCATACCGGAAATCGACCGCACAAGTGCACAATTTGTGGCAAGGAATTCACTCAACGGTATACTTTTGCCGtgcacatgtcgcgccacacgGGAGAGCGGCCGCACAAGTGTACCGTTTGTAATAAGGCCTTCGTTTTGAAACACAATCTTAAAGTTCACATGGCGATCCATACGGGCGAACGACCATACAAATGTAACGTATGTGGCAAAGATTATGCTTACAGAGCGGCCTTACAGGATCACAAATTCCTGCATACCGGCGAGCGTCCGTACAAATGTACACTATGTGAAAAGGATTTCACCACAAGAAGTATTCTAGCTAACCATATGGCTCTGCATACCGGCAATTATCGACTGAAGTGTAATATTTGTGGCAAAGGATTTTTTGCCACATATCGCTTGGAGAAGCATAAACTCATTCATGCTGACACGTTTTCCTGGTTGAATTGA
Protein Sequence: MADNNTKSSESFPTVPSISTIGSAHECVLCSRTFLTKQQLIKHKRAHGEKLSSSCEVCGKTFSSRNSLLGHRYVHTSERPHKCTYCNKDFTVKARLTKHILIHTDEYPFRCDVCGKGFMNNNQLERHKRVHTGEPTTGEDKLPTNNEESNVNTTCGFVYDCELCGKQFSTKKRLAAHGRIHRGKPFVCNICDRAFYKSNNLIRHQFTHTGDRPYKCNLCDKEYICNSNLVAHMSVHTGDYRLKCDVCGKGFNFGSLLKEHLRTHSSEQSNDNQPNDQQPYICSVCGKRLASKRSLNLHMSLHTGNFPYRCEVCGQGFYAGNTLREHTRLHTGESMFMCTMCGKDLASKRNLKNHMSVHTNVYQHRCDMCDKGFNTLHNLKLHRVLHTGEAKTKCTVCGKEFNKERYLVRHMTMHTKDYPHTCDIDSKVKNFDLPEPHFPSLNAGTDNMKLYDTKINELLDIKVQEVSNTNRGSENENNLVPEGSNFEQPMIDSGVFSSIGTTSSTSPDTSTRPHECEYCGKRFGSKSNLARHERGHRGEKPFSCDICHKGFAEKRSVQRHQSAHTGVRPFKCNMCGKNFAQKRNLSDHMSVHTNEYRHQCDVCGKGFNAIYLLEEHKRRHNTVPTKKKNIGIVYYLQGKENSSVTPPTTPDTATDSIRRYECDFCGKRYVKRYQLAEHFRSHSGERPFTCDVCGKTFSGSGSLSRHRKNSHATERPYKCTVCDRAFVVKSNLTKHMPLHTGDYPLTCDVCGKGFNTAFRLGKHKLAHISDPTLGTEKRIRKPRKRKAVTVHKCETCGKVLTNKWSLVLHLRAHNGERPYSCEICGMKFSSSSAVGRHRFTHTGNRPHKCTICGKEFTQRYTFAVHMSRHTGERPHKCTVCNKAFVLKHNLKVHMAIHTGERPYKCNVCGKDYAYRAALQDHKFLHTGERPYKCTLCEKDFTTRSILANHMALHTGNYRLKCNICGKGFFATYRLEKHKLIHADTFSWLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -