Basic Information

Gene Symbol
snpc-4
Assembly
GCA_030247185.2
Location
CM058072.1:39962885-39978031[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 7.5 1.9e+04 -2.9 0.0 3 17 154 168 153 169 0.90
2 6 1.3 3.3e+03 -0.5 0.3 12 45 214 254 211 255 0.73
3 6 4.8e-13 1.2e-09 39.3 0.0 1 44 261 305 261 307 0.95
4 6 4.3e-10 1.1e-06 29.9 0.1 2 43 316 361 315 364 0.91
5 6 1.1e-08 2.7e-05 25.4 0.0 3 45 372 415 371 416 0.95
6 6 3.3e-06 0.0084 17.4 0.1 4 44 425 472 422 474 0.88

Sequence Information

Coding Sequence
ATGTCTGATTTCAGTTCCGATCCAGAAAGTGGTCCAAGCTTCCAGACTGAGTCGGAAAGCGAACATGAGTCTGTATGGGGCGAGGAAAAGGATCAAAAAGAAATCGATTACACGACAGCGGCAAAGGATATAATTTGCGAAGATGTGAATATTACAACTGAGAATGCTTTGAAACTCAATAGTGGTTATCATAATATGCTGAAGGTGCTAAAGAACAAACTGGAAATATTGCTTGCACACTGCCAGGAAAGGCAAGTTGAGATTGAGAAACAAATTGACGAATATCGAATTAGTAAAAAACCACTAACGGGCAAGGCCCGCACCTCCGGTTACATTTGTGGGCAACCGTATTTTAAAGATGAAGATTTGTATCCGGGGCCGCACAACGATGATTACCTCTATCGAAAGAACGTAAAGAAAGAGTTCTTTCCTTTGGACTTATTCGAAGTAACGGATACCAACTGGACGGTGAAGGACAAGATCAATATTCTGAAAGGCGTCAAGACACAAATTGTGGAGTTTATCGAGATGGAAAACCGGTTAAAGATTAAAAAGATTGGGAATGGTTTGGAAGCGGAAAGGTTACGCCGTGAGATTGCATCGTTGAAAGGCATGGACATAAACGATTTGTGGAATAAGGTGAAAAATTTCCATAATGAATATCCAGGGCAGAATTTTGGCATCGATTGGTTGCGAATTTCGAATGCCAACATCAGCGGTCGACATTCGGTTGAGGCTTGTATTGGCATTTGGAACAATTACATGCTACCTGGACTGGTGCGGGATGCTTGGAAAACTGAGGAAGAATCACTGCTGTTGGAAGCGGTGGAAGTGCACCGTCGTCAGGACTGGCATGCCATTGCGGAGAGTGTCCCCGGTCGGTCCCCATACCAATGTTTCGTTCATTATCAGACAACTTTTTCGGATTTGGCTCAGATTAAACACGACCGCTGGACAGATAAGGAAGATGCGCTTTTGGTACGGTTGGTGGAAGAAAATCGAATTGGATCGAACATTGTGTGGAACAAAGTCGTAGAGAAAATGCCCTTGCGAAATAAGATACAGTGCTACAATCGGTACATGTTCACGCTGATGAGGCCAACGAAGAACGCTAAATTTACTCCGGAAGAGGATTGCATCATCACTGCTTACGTGCAACAGtatggtgatgatttccgatttgTTCCTCCGAATTTGCTTCCCGGTAGATCGAACCGTCAGATTTGGGCGCGCTATAACCAAACGTTAAAGTATGTGAAAAAGCATTCGGGGTGGACAATCGAGGAAGACATGCGTCTGATGAATttcatcaaagaaaatcttaccGACGAAGGGCCACGGAAAATCTCGTGGGCGGCATGCTCTAAGGTTTTGGGAAATCACTCGCGACTGAGTTGTCGGACACGGTATTACACCATCGAAAAGTTCCTGGAGAAAAATCCGAACGCCACGTTGGACGATGTCCCACGCAAAGACAAGAAACTGTCGACCCAAGTGACCAACGATAACTGGATGAGAACTATAATCGATATCCGAAACGAACCGAAGGTCGACGAACCGAGTGAACTGGAACAACCTTCCACTTCAGCCACGCCAGTTTCGAAGGTACAGAAAAAGTCTCGTAAGCTGTCGAATGTCACCCTGTCAAAAAATGGTCGTCCTTTTTCGAGTACACTAAAGTGTGTCTTCAAGAAGCAATTCTACGAGAAGATGAAATACTCGTTCCACTATTGTTTCAACGAACAAACCGAGATTACGGATAACTACAGAGTGTTTTGTaacaataaaattatatttatgcTTCTCAACTGCGTGGTTTCCCCGGAGAAAATAAACAGTTTTAGTGAGTTGACACCAGCGGAGAAAACCCATCTGCAAAGCAGTATCACGATCCAAATTAATCCTTGTTGGGTCAATTTTCTGCGAAGTGCTATGTACTGCTTTTTGTTTCCGCCAAACTACAATACCATGCTTGGCTTGCGTGGGGTCGTTCTGAACGCCACATATCCCAAAGAGGAAACATCTAGTTTGGAAATCAAACAAGAATGTACCGACGAGGTGGGATACAATCATGCACTGGACACTTTTCGGGATCGTTTCCGTATGCTTTTCACTTGGACAATGTTGCTGGTTCGACAAAACCCTCGAGAGGCGGATTTCCGAAAAGATCCCGTTCATACCAACTCCCAAGCTGAAATGCCCTGTGAACTGTATGATTTTTCCGCTAAAATGATCGAAGAGCAACTATCCTTGGAGCAACTTTCAAAACTTCACAACAGTCCACGGTTACCGTACAAACGGATTCAAAAACCTACCGGTGACCAGCCGGTCTATGAAACAACAGTTTGTCTGGACCAACTTGATCTATACGGTAGACCATACCAGGATCAAGCTACCGAAGATAAAATTGACATGGTTTCAAACCAAACGATAAGCAACCCTCCACAACCCGAACCAGTTATCATCCCTGAAAGTGGAACCTCGTTAAAAGCCGGAGATATCAACTTCACATCTCAGCCATTGCCCGACTATAACAATGTACACTATAATTTGGTATTGACCCAAACACCGAACATTGAGTCGACCATCCACAGTACAATGTCCGATCAACTTCTGCCATTCACAAATAAAGTCGAACATACCACGAACCATATGGATCTTGTCAAGCAAATTACTGTTATTGATCCGGAACACCTTCCAGTGGCTCGAGCACCGATCGAATCATCAGAACAATTTGCATTGCCACAACCACCATCACAGACAGCAATTGCGTTGTGTGCTGAATCAATCCAAATGGCAGTGGGTGGAGACGGAAAAGTTGATGAACATGCCATCGGGGATGAAACGTATCCCAGTGAGACGGATAATAATGGCAGTGACTATGAGTCTGACGATCCACAGCCACAGCCGGCAGCAGAAGTACTCTCGGGGGTCGAAccagaagcgaatgcaattagtGAAGCACTAGTCGATTCCACGGTTACGACAACCTCTAGTGAAACAAACTCAATAGCAGCTGATACAACAGCAGATTCAGACACCAAAGAAAACGAGACTGATAACGAATCGCTTAGTTTGGCCGATTTATCACACGTTACCCATGTGTCCACTGTAAGTGACTATGTGATTGAGAAATTAGAAGAACCGACAATAGTCGACTCTCCAAAGCTGTTGGACGAACCATTAGATCTACACATTGGCAACGTGAGAAGTAAACAACAAGAAGAAGAACTCTCATTGAAATCCAATGAACCATCATTGTTTTGTTCAGAGTCGGATTTAGGTGATTCCTCGGAATCAACAGCTAATGCCGAGAGTCCATCACGTCTGGAATCGGATGACCACGAAGAGTTAGTGAAAGTACCTAGAAAGACCTACGGCAGAGTGAGTCGGGGCCCTAGTAAACAAAAAGATAACGAAATATCGCGTAACAAATCCGATCGGTGGTGGCGCTGGGTGCATGTTGATGAGACAAATCCTGACGATGTAAATCTACACCGTGAATTGTGGGAAATGAGTGATCCGTTCAGGGAACGTTTCAGGCAACTCCGATTGCCGGAATGTGATGAGAAAAAGGATGAAATAATTGTAATTGATGACGATGAGGTTGAAATCAAAGAAGAACCACCGGAACTGCAagaaactgaacaagttgtcaACAAAGTAGAAGACACAAATGATGACACCGTAGATGAATCTTGCATTCAGCAAATAATTCAAACTGCTAGTAATATTTTGCGTATCACAGAAACGTACAAATTATTGAACCCAAACCCAGAGCCGGCCTACTCTGATTTTTCTCAACCACATTCTGAACAAGCGGTGCAAGATTTTTCTACAATGAGAAAATCTGGCTCTTTAATCGTTCAGACGCCCTCTAGAATCTTCGATGAGCAGACCAATTGCTATTACTATGTAGACGAAATCAAAGAGGACTGCACAAACGATGTCGATGCACCAGTGGTAGAAATTCCACAATTGACACCGGATAGACCGATGCAGTCCAACCTGGATGAAATTTTAGAAAGCTCTTTAAGCATGACTTATCAAAATGTACCTGAATTTGAAGCACCCCGACGCGTATTAACCCTTCCAAGAGAAACCACCCCCACCACCGAATCATTTCAGGCTTACCCGCTACACACAATACCGCTAATTTTGCCTAACACGTacagcagaaaaaaaattaaaaactTGCCTCCATCTAAATCTCAACAAATCGAGTCCCGCATTATGGAACACCCAGCATCAGAGGTACCGAAAAGACGACAACCAAAACGGCCACCACGAGACCAAACTAAAATCTCACCAGAACAACAAGAGCAAGCCCTGTCCCTGTTGGACGCCCTTTACCGAAAACCTCGACTGCCACCAATTGCTGTGAATAAATCGCCTACTTCTGCCACGATGGTGGACCGTGAGACTGACAAGTGTGTTTTAACATCCACGTCAGCAATAACTAATCACATCCCAAAGAATACTCCACTTTGCACCTTAGGGCAGTCCCCAAAAAGACCTCCCAGCAAATCACCGGAGAAACGACCTACAAAACGCAACAAAATATGTCGGAGGATTCTCTCACCAGCAGACATAAAGCCAGAATTTAATCACGATGAATTTTTGGAGCGATTAGATGAATCCATCGATGCAGTAGATTTCATTGATGCGTTGAATAGAATGAATAGACGTGTTAAAGTAGAAGAGAAGGAATatgaagatgatgatgatgatgatcattatgatgatgacgatgatgatgattgcTCAAATGATGAGCAACATCATTCAAACGTTGAGGATCGGTTGACAGAAGAAGACTCTGATTATATTGATCGAACCCCACTAACATCGGAAAGTTCAAAGCGAGGAATGGCTCCTAAACAAACATCTTCTACCGTCACACAACAGATGGTTAAGACCATCATCGAAAGCACTACCGGCCGACCTTCCATGGATGTGCATTTCAAAATTGCCGGTATTACTATAAAGAAAGTACAACACAAATGA
Protein Sequence
MSDFSSDPESGPSFQTESESEHESVWGEEKDQKEIDYTTAAKDIICEDVNITTENALKLNSGYHNMLKVLKNKLEILLAHCQERQVEIEKQIDEYRISKKPLTGKARTSGYICGQPYFKDEDLYPGPHNDDYLYRKNVKKEFFPLDLFEVTDTNWTVKDKINILKGVKTQIVEFIEMENRLKIKKIGNGLEAERLRREIASLKGMDINDLWNKVKNFHNEYPGQNFGIDWLRISNANISGRHSVEACIGIWNNYMLPGLVRDAWKTEEESLLLEAVEVHRRQDWHAIAESVPGRSPYQCFVHYQTTFSDLAQIKHDRWTDKEDALLVRLVEENRIGSNIVWNKVVEKMPLRNKIQCYNRYMFTLMRPTKNAKFTPEEDCIITAYVQQYGDDFRFVPPNLLPGRSNRQIWARYNQTLKYVKKHSGWTIEEDMRLMNFIKENLTDEGPRKISWAACSKVLGNHSRLSCRTRYYTIEKFLEKNPNATLDDVPRKDKKLSTQVTNDNWMRTIIDIRNEPKVDEPSELEQPSTSATPVSKVQKKSRKLSNVTLSKNGRPFSSTLKCVFKKQFYEKMKYSFHYCFNEQTEITDNYRVFCNNKIIFMLLNCVVSPEKINSFSELTPAEKTHLQSSITIQINPCWVNFLRSAMYCFLFPPNYNTMLGLRGVVLNATYPKEETSSLEIKQECTDEVGYNHALDTFRDRFRMLFTWTMLLVRQNPREADFRKDPVHTNSQAEMPCELYDFSAKMIEEQLSLEQLSKLHNSPRLPYKRIQKPTGDQPVYETTVCLDQLDLYGRPYQDQATEDKIDMVSNQTISNPPQPEPVIIPESGTSLKAGDINFTSQPLPDYNNVHYNLVLTQTPNIESTIHSTMSDQLLPFTNKVEHTTNHMDLVKQITVIDPEHLPVARAPIESSEQFALPQPPSQTAIALCAESIQMAVGGDGKVDEHAIGDETYPSETDNNGSDYESDDPQPQPAAEVLSGVEPEANAISEALVDSTVTTTSSETNSIAADTTADSDTKENETDNESLSLADLSHVTHVSTVSDYVIEKLEEPTIVDSPKLLDEPLDLHIGNVRSKQQEEELSLKSNEPSLFCSESDLGDSSESTANAESPSRLESDDHEELVKVPRKTYGRVSRGPSKQKDNEISRNKSDRWWRWVHVDETNPDDVNLHRELWEMSDPFRERFRQLRLPECDEKKDEIIVIDDDEVEIKEEPPELQETEQVVNKVEDTNDDTVDESCIQQIIQTASNILRITETYKLLNPNPEPAYSDFSQPHSEQAVQDFSTMRKSGSLIVQTPSRIFDEQTNCYYYVDEIKEDCTNDVDAPVVEIPQLTPDRPMQSNLDEILESSLSMTYQNVPEFEAPRRVLTLPRETTPTTESFQAYPLHTIPLILPNTYSRKKIKNLPPSKSQQIESRIMEHPASEVPKRRQPKRPPRDQTKISPEQQEQALSLLDALYRKPRLPPIAVNKSPTSATMVDRETDKCVLTSTSAITNHIPKNTPLCTLGQSPKRPPSKSPEKRPTKRNKICRRILSPADIKPEFNHDEFLERLDESIDAVDFIDALNRMNRRVKVEEKEYEDDDDDDHYDDDDDDDCSNDEQHHSNVEDRLTEEDSDYIDRTPLTSESSKRGMAPKQTSSTVTQQMVKTIIESTTGRPSMDVHFKIAGITIKKVQHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-