Mgen010963.1
Basic Information
- Insect
- Malaya genurostris
- Gene Symbol
- -
- Assembly
- GCA_030247185.2
- Location
- CM058072.1:62939050-62940830[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-08 0.00014 22.7 0.0 9 37 22 49 14 56 0.81 2 2 9.1 1.8e+04 -3.2 0.0 5 13 277 285 277 288 0.82
Sequence Information
- Coding Sequence
- ATGGCTAAAACAAAAAAGAACATTAGGGAGAAAAGGTACACGGAAGAAGGTGTACAAAAatgtttaaatttgatcaggagCGGAATATCTTTCCGTAGTGCATGCATACGCTTTGGAATACCGCGATCAACTATAAAATTCCGCATGAGTAAAAATTACAAGCAACAAATTAGATCCGGACCACCTACTGCTTTTCGATCGGAACAAGAAACAGAACTGGTTAATTGGATATTAAAGATGGCCCGGAAGGGTTTCCCAGTTACTAAGTACCGATTAATAAATAGTGTGATGAATTATCTCGAACATAATCCCAATATGAATGTCTTCAAAAACGGCAAaccaaGTAGCGCATGGTTCAATTGCTTCATGAGTCGTCATAAGGCACTTTCTATTCGCAAACCGGAAAGTGTCACAAAGGCAAGTGCCAATGTTACAGAACTCGAGATACGGAATTGGTTCAAGGAAGTTTTAACGGTTTTGGAAGAAGAGGGACTATCTGAAGTCCTTATGAGCGCAGGCAATGTACTTAATGGTGATGAATCTTCATTCTATCTTGATCCATCCATCGATAAATTGGCAAAGGAAAACGCGCTACCAGCTATATATTTTATTGATGGTCATTCTTCTCATACTGCTTGGGAAACTGCGGAAGAATGCCGCAAGATGGGCAtacacttattttgcCTGTATGCAAACTGCACTAGAATACTACAGCCCCTTGATGTTGCGGTATTCAAAGCTATGAAAAGTTCATGGCTTAAAGTGGTAGATGATAGGAAATGTTTAGATCctaataaatatttaaaaacagaaaattttgctCCGCTTCTTGCGAAAGCTATTAAATCAGTTGAGAGTAAAATAATACAAAACGGTTTCAAAGCGTGTGGACTATATCCattcaatgaaaataatatcgACTACAGTAAATGTTTGGCGCACAGTCGTCCAGTTGGCGAAAATTTTGAGAATAAAAGGACGGATACTCGACAAATTACTTCACTAACATTTCCCATTGTACGATCGAAAGCTGTGGAAATTTTAACATTGATAGGGCCCGACCGTATATCGCTTTACAAAAGAAATAATTCTGATGATTTTCCATCTGATGAAGATAAAATTCTTGCGCGCGTGTATAAGCTTCTTGAACCCTTGGATTCGTCTTCGAATATGAATATTCCTGGAAATAACTGCATATAG
- Protein Sequence
- MAKTKKNIREKRYTEEGVQKCLNLIRSGISFRSACIRFGIPRSTIKFRMSKNYKQQIRSGPPTAFRSEQETELVNWILKMARKGFPVTKYRLINSVMNYLEHNPNMNVFKNGKPSSAWFNCFMSRHKALSIRKPESVTKASANVTELEIRNWFKEVLTVLEEEGLSEVLMSAGNVLNGDESSFYLDPSIDKLAKENALPAIYFIDGHSSHTAWETAEECRKMGIHLFCLYANCTRILQPLDVAVFKAMKSSWLKVVDDRKCLDPNKYLKTENFAPLLAKAIKSVESKIIQNGFKACGLYPFNENNIDYSKCLAHSRPVGENFENKRTDTRQITSLTFPIVRSKAVEILTLIGPDRISLYKRNNSDDFPSDEDKILARVYKLLEPLDSSSNMNIPGNNCI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -