Mgen032423.1
Basic Information
- Insect
- Malaya genurostris
- Gene Symbol
- -
- Assembly
- GCA_030247185.2
- Location
- CM058073.1:155179672-155181237[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-09 3.4e-06 27.9 0.1 3 38 6 40 4 43 0.92
Sequence Information
- Coding Sequence
- atGGTTCGGAAATACACCAAGATGGAGTGTGCAATTCGAGCGGTCAAGAATGGAAGCAGCAAAACAAATGCTGCTCGTATTTATGGAATTCCAAAACGAACGTTGCTACGGTACTTATCGAAGTCGGAGTGTCCTTTGAATATATTGAAGCTCGGTAGTTTCAATGCCGTTTTCAATCAGATACAAGAGAATCAACTTGTAAATTATATCTTGGATATGTGTCGGACATACCATGGACTTACTATAAAAGACGTGCGCAGCCTTGCATTTCAATTGGCGGAGATTAATAACATCCCTCATCCTTTCAATCGTTTCGAAAAGCTTGCAGgaagagattggtttgtttgttttcgaaaGCGGTTCCCGAACCTTACATTACGATCAGCTGAGCACACTTCAATGGCACGAGCAAGAGGTTTCAACAAGATCAGCGTAGACAagtattttgatcttttataCAGTATTTTTTCGGATCATCCATATCCGCCGTCGAGACAATACAATATGGATGAACTTGGAGTTGCAACAGTCCAATCCAAACAGGCAAAAGTTGTTGCCAAGAAAGGACAGCACCAGGTAGCGGGTATAACATCAGGAGAAAGAGGTGTTAATACAACTGTGGTTATGGCAATGTCAGCTGCAGGTGACTTCGTACCTACTCAATTCATTTTTGCAAGACAACGTATGAGTGATGCTCTTAAAGTTGGTGCACCGCTGGGATCCGTTTTTACGTGTAATGTTAATGGTTGGAGCACTATTGACACTTGTTCTAAATGGTTTGACCATTTTTTATCACATACTCGGCCATCTGTAGAATCTCCAGTGCTTCTGATTCTTGATGGACACTCGTCCCACACAAAAAACCTTTATATGTTAGAGAAAGCACGACAAAATTTTGTACGCATTGTATCTATCCCACCCCACACCTCCCACAAGCTACAGCCTTGTGATCTTACATTAATGGGACCGATGAAATCGTGTTATTCAGCTGCAATTGATGGTTTGCTAAGACTACACCCGGGCAAAGCGATAACGCCTTACGATGTATGCTCGTTGGTTGggaaatcatttttaaaatgTGCAACCGTAGCCACGGCAGAGAATGGAGCGGCAGGCATTTGTCCACTAAATCGAGCACTGTTTTCAAAAGACGACTTTGCTGCTGCGGATTTTTTATTCCAAATGAACAATATTGACAATGATGCAAATTTGGATCCTGTAGGAACTAATGAGGTCGCAGAGATATCTAAAATTTCCATGGATATTGTCAATTTGGAAACACAAAATGTAATTAATTATGGTGATATGAACTCATACGTTACTGTCACCGACAATGATGCAGTCAATGCAAACGAAATTGTGGTAGATGCAAATATGTATTATTTAATTCAAAACGATGGTCAAATTATGCTAAAAACTTTTTCCCCAGACAATACGATGGAACCGTCATCCGATAGCAAGGATTTTCTTCCAGATAATGTTGATTGCTGGATCAGACGTTTCGAAAATTGA
- Protein Sequence
- MVRKYTKMECAIRAVKNGSSKTNAARIYGIPKRTLLRYLSKSECPLNILKLGSFNAVFNQIQENQLVNYILDMCRTYHGLTIKDVRSLAFQLAEINNIPHPFNRFEKLAGRDWFVCFRKRFPNLTLRSAEHTSMARARGFNKISVDKYFDLLYSIFSDHPYPPSRQYNMDELGVATVQSKQAKVVAKKGQHQVAGITSGERGVNTTVVMAMSAAGDFVPTQFIFARQRMSDALKVGAPLGSVFTCNVNGWSTIDTCSKWFDHFLSHTRPSVESPVLLILDGHSSHTKNLYMLEKARQNFVRIVSIPPHTSHKLQPCDLTLMGPMKSCYSAAIDGLLRLHPGKAITPYDVCSLVGKSFLKCATVATAENGAAGICPLNRALFSKDDFAAADFLFQMNNIDNDANLDPVGTNEVAEISKISMDIVNLETQNVINYGDMNSYVTVTDNDAVNANEIVVDANMYYLIQNDGQIMLKTFSPDNTMEPSSDSKDFLPDNVDCWIRRFEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -