Mgen033706.1
Basic Information
- Insect
- Malaya genurostris
- Gene Symbol
- ab
- Assembly
- GCA_030247185.2
- Location
- CM058073.1:182043004-182044447[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7e-11 5.3e-08 33.7 0.0 3 38 270 306 269 312 0.91 2 3 0.013 24 5.9 0.0 23 35 338 350 323 355 0.89 3 3 3.3e-08 6.5e-05 23.8 0.0 7 38 382 413 379 416 0.94
Sequence Information
- Coding Sequence
- ATGAGCCGAACAGATGTTTCCTGTGTAAAATGGGTGGACTTTAGTGATCACATGTTTTCCACCTTTTTGGATGTCTATTTGAATGCCCTATATACGGATGTGACCCTAGTGTTGGCAGATGGAGGTCATCTAACGGCCAGTAGAATGGTACTATCGATGGCTTCTAGATTTTTCGAGGACATATTCTGTACTACTTTCACTGCGATGCCGTTCGGTGGAAGTGGTGGGCTGCAAGAAATAAAGGTCATGATTCCGGATGTTAGTTGTGGAATCATGAAAAATGTGCTTCAATTCATTTACACCGGAGAAGTGCACATGAACGCGAGGGACATGGCGGATTTCTTAGAGGCTTGCAAGTTGTTCCACTTAAAGGGACTGGACTATCAGAATGGCAATATTACTGGAATTAAAATAAGTGGATCTAACATTATCACTCCGGTACAGTTCGATTTTGATGAACTGCAGGAATCGTACGTGGAAGCATCGTCGGATGGAGCGGGCGAGTCTGAAGTGAGTGTCATCGAGGCAGGAACAAGTTTGGACATAGTTGAAGAAACCAGCTTCACTCAAATGGAGGTagagaaaaatgttttggaaaATGAACAATCAATTAATCAGTACTACGAGATTGAAATGGATATGTCTGGATTGGACTCGAAACCCGTACATGAAACAGTGTCAATAAAAGGCGATGATTTGGAAGCAATTCCCAATTTGGAAACTCCCTCTGATATCAAAGTAAAAATGAACGAAAGCGGAGAGTCTTCCGTTCAATCAAAAAAGCGCGCCAAAAACATTGAATACGGAACTCGTTTGGACGAAGCAATACATACTATCATTCAGGAAGGTACCAGCTTTCGAACGGCTTCTATTCAATACGGCATTCCAAAAACCGTCCTCTGGCGAAAGGCAGTAAAAGCACCCAACTATAAAACCGAACGTCTTGAACTGCCTTCCCCGCGAAAGGAAGCCATTGAAGCATTGAAATCAGGCGAAAAACTCCTGAACATCAGCAAACGGTTTGATATTCCGTTGTCTACGTTGCATCGAGACAAACTGAAACTTTACAGCGAAGGAACTCTACCTGATAACGTTTCGTTGAAACAGCGGGACAAAGGTTCAGACTTTAAGCAACGCGTTCTAGAAGCGGCCCAGCAATGCTTGTTGGGATTCATGTCCCAATCGGAAGCATCCAAATTCTACAAACTGCCGAAGACTACCATCTGGAGGCGGATCAAGGCATTACGAAGAGAAAGTGACGCAAAAGGCGATTTCAAGAGGGAAATCGGTTCCACCGAAAATGATCTGAAGGTCGAATTAGAACAGGCATTAGAAGACCATGAGGAAGAACATCTCGATCCAGAATTCGTTGTGATGGTTTGA
- Protein Sequence
- MSRTDVSCVKWVDFSDHMFSTFLDVYLNALYTDVTLVLADGGHLTASRMVLSMASRFFEDIFCTTFTAMPFGGSGGLQEIKVMIPDVSCGIMKNVLQFIYTGEVHMNARDMADFLEACKLFHLKGLDYQNGNITGIKISGSNIITPVQFDFDELQESYVEASSDGAGESEVSVIEAGTSLDIVEETSFTQMEVEKNVLENEQSINQYYEIEMDMSGLDSKPVHETVSIKGDDLEAIPNLETPSDIKVKMNESGESSVQSKKRAKNIEYGTRLDEAIHTIIQEGTSFRTASIQYGIPKTVLWRKAVKAPNYKTERLELPSPRKEAIEALKSGEKLLNISKRFDIPLSTLHRDKLKLYSEGTLPDNVSLKQRDKGSDFKQRVLEAAQQCLLGFMSQSEASKFYKLPKTTIWRRIKALRRESDAKGDFKREIGSTENDLKVELEQALEDHEEEHLDPEFVVMV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00948940;
- 90% Identity
- iTF_00948940;
- 80% Identity
- iTF_00948940;