Basic Information

Gene Symbol
kn
Assembly
GCA_030247185.2
Location
CM058073.1:28914597-28919675[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-118 2.4e-114 384.0 0.0 205 385 1 208 1 212 0.99
2 2 8.6e-09 0.00018 21.2 18.3 422 531 211 317 208 333 0.63

Sequence Information

Coding Sequence
ATGCGACGATTTCAAGTAGTGATAGCGACCCAGGTCGCCGTAGACGGACCACTTCTGGCGATATCCGACAACATGTTCGTGCataacaacagcaaacacgggCGCCGAGCGAAACGGCTCGACCCCGAAGGTACGGGAGGTTCTCCATTGGCAATTTCGGGCCATCCACTGGCACCGGACAGTACGTACGACGGAATCTATCCGCCGCTGCCTATGGCAACCCCCTGCATCAAGGCTATATCACCCAGTGAAGGCTGGACGACTGGAGGCGCGCAGGTAATCATCGTGGGCGATAACTTCTTCGACGGACTACAGGTGGTTTTCGGCACAATGCTAGTGTGGAGTGAGTTGATAACATCGCATGCGATTCGGGTGCAGACTCCTCCTCGTCACATTCCAGGAGTAGTGGAAGTTACGTTATCCTACAAGAGTAAGCAATTTTGTAAGGGGTCTCCAGGACGATTCGTCTATGTCTCTTTAAGTGAACCTACCATCGATTATGGTTTCCAGCGGTTACAGAAATTAATTCCTAGGCATCCTGGTGATCCTGATAAACTACCCAAAGAGATAATCTTGAAGCGAGCGGCAGACTTAGCGGAAGCACTGTACTCAATGCCACGGTCACCAAATGGCTCTTCGGGTTTTAACTCCTACACTGGTCAGCTAGCGGTCAGTGTCCAAGACGGCACCGGACAATGGGCAGAAGCTGATGAGTACACCCGAGCACAAAGTAGTAGTGTTAGTCCCCGGGGAGGTTACTGCAGTAGTGCCTCCACACCACACTCCTCCGGAGGCGGGTCCTATGGAAGCAGTAATGGATATGCGACTGCTTCTAACATGAGTGGACTGACGTCTTCAACGGCGAGTGTTTTCAACTCATCGTCGATTACTTCGACGCCGAATCTATGGCACTCGCAGCTGGTACCGTCACACAGCTACTCGGCCACCGGTGCACACCAATTCTGGCACGCTTCGTCATCGTCTGTAGCGACAGCGGTTTAG
Protein Sequence
MRRFQVVIATQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPEGTGGSPLAISGHPLAPDSTYDGIYPPLPMATPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLSEPTIDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADLAEALYSMPRSPNGSSGFNSYTGQLAVSVQDGTGQWAEADEYTRAQSSSVSPRGGYCSSASTPHSSGGGSYGSSNGYATASNMSGLTSSTASVFNSSSITSTPNLWHSQLVPSHSYSATGAHQFWHASSSSVATAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00455729;
90% Identity
iTF_00105631;
80% Identity
-