Basic Information

Gene Symbol
ARID5B
Assembly
GCA_030247185.2
Location
CM058073.1:113839027-113864129[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-13 6.8e-10 40.4 0.0 2 89 354 434 353 434 0.90

Sequence Information

Coding Sequence
ATGGTGTGGAGAGATCGGAACGAACAGTGTTTGCTGCTTGCCTTGCGACTATATTTTCTACCGGAGAACACACCATCTGGAAGAAACTGCCACGGAGAGGACGAAGTGCTGGCCATTTCCGACAAAGTGATTCTTCGTGCGGATGATCTGCTAACCTGGCTCTCGGTGGATCTTCAGTGGAACTGGGGCCTTCGGACGGCATACAACAAACACAACGCCAAAGATCCCACTGGCACTGCCCGCTTTCTCAGTAAAAATGCCTCCCTGGACTTTACCGATGTCGACAAGGAAAAGCACTCGGcCGAAAACATTGCCTCCAAAGTGGCAGTTTTGAGTTTTCCACGCTACTGTCGCTACCGAGCCGCACTAAAGCGCCTGGAAGGTGTCAACGATGAGTGGCTACGAAACACGTTGGTGCAGACGCTTAGTGGCTTCGTGGTCACTACACCCAACATGCGGGTCATGTTCTGCAAGGACACCTTCGACTATCCGGAACTGGAAACCCACGAACTACTGTGCAATCATTTGGCGCCCAAACTGAAAGGACGACCGCGCGGCAAACGAAAGAAGACCCTGTCGGACTCGTCGACGCATGTTGTGAAGAAGGAAGGCATCTCAGAAGAAAGCGAAACCAATGATTCCGATGTATCTGACTATTCGTACAATAAGGTTTCACCATCGAAAAAAGTTGACCTCCAATCGACCCCCCGATACAATCCGCGACCAGCGCGAGCTGCACACACGAAACTGCCGGCAGCAGATCCGATTGCTGTACCGTCCGTGCCTTTACCGGTGCCACCGGTCATAAAACCACCGGCTCGGAGCAAGAGTAAACAAGGTAAAGGACGCAAATCGAAGGCTGGCCGGAAACCGAAAGTGAGCAAATTGCTTACTGAACAAAAGACCGACCAAGAGAGCGGCCTTGAAGACGAAAGTATAGAGGATCAGGAGACGGAAGTTACTACTTGCGAAATAGATGAACAAGTTCAGTCAAATCTTCCGGAGGTACAGACGAAACATGATAACTTGTTCAAGGTCAATGAAGGCATGGTCGCGGACGAGCGAGACTTCATGCAGAGATTGCAGCAATTTCTGGATGACAAAGCGCTTGCTTATGCAAACAGTCAGGCAGCATCGTTGAAAGATGtaaaattatACCTCATCTACACACGTGTTCTAAACATGGGCGGATATAGTGAGATTAGCAGTAAGGATAAATGGAATCAGATACTGGACGGAACAGGGGGTGAAAACGGTATAATGAGTAGGAGAAAATATGAGAAGATACTACTACCATACGAAAAACACCAGCGAGAAATTGCCGAGGCTGTGAAAAAGGAAATCGAGGAACAGGAAGAAGCTACTCACGAAAGTCAAATTTCACCTACACCACACGAATATGACTCCAAAGAAAGCATCGTCGAAGTCAAAGTAGAAAAGGATGCGGTCGAAATGAAAATCGAAAGGGATGTGAATGAGTCAGAAATTTCCGTAAAAATTGAACCTAAGGAAGATAAGGAAAATAAGGAAACTGTGTCGCTTGCTACCGAAGAAGTGTCGGTAAAAAAGGAACCCGAAGAAAAGGTTGGCATGGAAGTCAATAAGGATGAGTCGTCCGAAGTACAAAGTAAAGTTAGAGGAAAAGCCCTTTCTCCGTTGTTGGAGAACAACAATAGCAACAGCAGTACGGTGACTGGCAGTCCAACAGGGGTTCACTTGGGGATGTCACCGGTGTCCGTCCCCTTGACAGTGATCGTTCGTCCAAATATAGATGAAAAAGATCAACAATCATCacagattcaaataaatcagCCACACACTACCATCACGGTCCATCAGACTACTATTCATCCTCAGGGCAATCAGCAACCAAATAGTCAGCAAATCAGTGGACAAAGTCCTCAACATAtaacaaatcaaattcaaattacaAACCAAATCCAGATTCAGCAAATTACAGTGCAATCAAGCGACAAAAGTTCCAATGGTGGACCTAATGAAAGTTCTCAGTTCAAATATAGCTTCAAGCAGGATAAATCTGGGCAGGAGATCAATATAGAATCTCCATCTGCTGATGGTTCGAAGGTatcgaattttgaaaataacatcAGCGCCACGCTGTTTCCATTGAATCGTTCAACCAATGCTGATCCGGATTTAACTATCAAGGAAGTATCTGTTTGCCCCACTAGTGGTACCGTTTCGATTACTACTTCGAGTACGAACCCTCCGAGCGGAGCAAACGCTTCTTCAAAAACATCTTCCCTACGCAATGTACGCATGAAGACCGATCGCAAAGCAGCAACTAACGCGTCAGCTTCTGAGGGCTCTGGTTCATCTGGGAAACAATTTGAGAAAGAGAATATATCACTGTTTGGCGGTGGAACGAATCTCTTCGGGAGCCAAAGTCTTACAACAATTACTCCAATAGCATCGAACCTACTCGGAAGCGTAGCTGGTATGGCAGCCATTGCTGGATTAGCTTCCGGTTTAAGCGGAAACCCGGTTGGTCTAGGAAATACTGCTGGTGGAAGTAGTTCTCCCAGAACAAATGTACAGACTCCAACAGAGGTAATCGACCTGGTAGATAGCGACAATGAAAGTGATTCATCGACACCAACAAAGTTCACCAACCAAACAAACACTGCCAAACAGGCCGGTTTATCGATTCGCCCAATTCCATCTCTTCTACCTCCGATGAAAAAACGAAAGTTAGATATCTTGCGCGAGGGTGGTCTTGAAGTAACACCTATTTCTAACGGAACAAGCATTTTCTCGGCTATAACTCAGCACAGCCCCAAGTCCAGTCCTAATCCGATGCGCATCAACATCACAGCTGAAGTTAGTCCGCAACGAGGAAAACAATCTGACGACACCCGATCACGCGAAAGAAAGTACATACCTACACCGATAGAGTGCCAAACTCCGGGAATGTATGCCAAGACTGGACAAATCTTTGGAAATCCGAAGGAAATTCCTAGCATACTCACAGTTCCCACTAGAACAAATCTTTCTGCAACTGTAACCGATTTGCTTGATTTGACGGGAAGCACAAACCCTCGAGTGGAGAATCTGTCTGCCAAGACGCACGCATTGGTTGACTTTTTGCCAGCATCTCGCAAACGAGCTTCGGCTGATAACAACGTTGGCCGTACACCCAGAACAGCTCCAAGTTTGCAAATCACACTGGTGCAAGCACCGAATCAAGTTTCTCCGCCAGTCACACAATCAAATGTCACCAGTCCACCACAGCAAGCATGTTCCaatcaaagaaaaaaatcattcgaaGCAGTGCCATCACAAACCGCAGCAATTGCATCTCCCACCGTACATCCGAAGGCGCCTAGTCCAAAAATCTCTATGGGGCCATCCTCGTCCGGTTCGTCGGCATCCAGTTCTAATGGAACAAGCTCAAACCCTAATTCTCTGCTTGAGACAGGGTTACTATTGGCAAATTTACAAAAGGCAAATCCTCTTCTTGTGGCGAGTATTTTATCTTCCTCTGGTTTAGCAAAAGCATCCATACCTGGCTTAACACAGCTCCTCGGAACGCTCACAGAGCAACCACCAGTAGCCCCTAAGAAAACCCAACGTCGGAGATCAAACATCCAAAACCAACCGACCGTTCAACATCAACAACCACCACAAACCGTTCAGCAAATTACCCCTCCTCAGATTCCTCCTCAGTTCCAGACGCCACCAAAATCATCACCGTCGCCATCCTCACATCATCCAGCACCATCAGATTCTCCATCTTCACATCCACTCAGTCAACAGATCAAACTTCTTCAGCAAGTGCAGATGCAGCAACAGCAGAAATTACTACTCGAACAGCAACAGAAGGCTGCCGTTGAACAGCAACAAAAGGCTGCCGCACAAGCCCAGGAGCAAAGGCGCATTCAGGAGCAAAAACAGAAACAACTTCAAATGCTACAGCAATTACAAGCTCAGAAGCAGGCTCAAGCCACCATAGCTCGGGCTTCATCACCAACAGTGGCTACTACACGCATACCAATACCGCCAAATCCGGCATCATCGTCGTCTACGCCGCAATCAACCTCTTCTGCCGGAGGATTCCCATTCGATCCTCTCTATCTTTCGGCCATCTATGCGAATCCCAGTCTGTATCTTCAGGCTTTAAGTCCagagcagctgttgcaattttaCAAAAACCTTCCAAATGTTGCCGGTATGCCACCGAGTAGCAAGAGCTAG
Protein Sequence
MVWRDRNEQCLLLALRLYFLPENTPSGRNCHGEDEVLAISDKVILRADDLLTWLSVDLQWNWGLRTAYNKHNAKDPTGTARFLSKNASLDFTDVDKEKHSAENIASKVAVLSFPRYCRYRAALKRLEGVNDEWLRNTLVQTLSGFVVTTPNMRVMFCKDTFDYPELETHELLCNHLAPKLKGRPRGKRKKTLSDSSTHVVKKEGISEESETNDSDVSDYSYNKVSPSKKVDLQSTPRYNPRPARAAHTKLPAADPIAVPSVPLPVPPVIKPPARSKSKQGKGRKSKAGRKPKVSKLLTEQKTDQESGLEDESIEDQETEVTTCEIDEQVQSNLPEVQTKHDNLFKVNEGMVADERDFMQRLQQFLDDKALAYANSQAASLKDVKLYLIYTRVLNMGGYSEISSKDKWNQILDGTGGENGIMSRRKYEKILLPYEKHQREIAEAVKKEIEEQEEATHESQISPTPHEYDSKESIVEVKVEKDAVEMKIERDVNESEISVKIEPKEDKENKETVSLATEEVSVKKEPEEKVGMEVNKDESSEVQSKVRGKALSPLLENNNSNSSTVTGSPTGVHLGMSPVSVPLTVIVRPNIDEKDQQSSQIQINQPHTTITVHQTTIHPQGNQQPNSQQISGQSPQHITNQIQITNQIQIQQITVQSSDKSSNGGPNESSQFKYSFKQDKSGQEINIESPSADGSKVSNFENNISATLFPLNRSTNADPDLTIKEVSVCPTSGTVSITTSSTNPPSGANASSKTSSLRNVRMKTDRKAATNASASEGSGSSGKQFEKENISLFGGGTNLFGSQSLTTITPIASNLLGSVAGMAAIAGLASGLSGNPVGLGNTAGGSSSPRTNVQTPTEVIDLVDSDNESDSSTPTKFTNQTNTAKQAGLSIRPIPSLLPPMKKRKLDILREGGLEVTPISNGTSIFSAITQHSPKSSPNPMRINITAEVSPQRGKQSDDTRSRERKYIPTPIECQTPGMYAKTGQIFGNPKEIPSILTVPTRTNLSATVTDLLDLTGSTNPRVENLSAKTHALVDFLPASRKRASADNNVGRTPRTAPSLQITLVQAPNQVSPPVTQSNVTSPPQQACSNQRKKSFEAVPSQTAAIASPTVHPKAPSPKISMGPSSSGSSASSSNGTSSNPNSLLETGLLLANLQKANPLLVASILSSSGLAKASIPGLTQLLGTLTEQPPVAPKKTQRRRSNIQNQPTVQHQQPPQTVQQITPPQIPPQFQTPPKSSPSPSSHHPAPSDSPSSHPLSQQIKLLQQVQMQQQQKLLLEQQQKAAVEQQQKAAAQAQEQRRIQEQKQKQLQMLQQLQAQKQAQATIARASSPTVATTRIPIPPNPASSSSTPQSTSSAGGFPFDPLYLSAIYANPSLYLQALSPEQLLQFYKNLPNVAGMPPSSKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01461680;
90% Identity
-
80% Identity
-