Basic Information

Insect: Malacosoma neustria
Gene Symbol: -
Assembly: GCA_963693495.1
Location: OY856400.1:6323693-6340274[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.061 5.8 8.4 3.0 1 23 338 360 338 360 0.98

2 11 0.0047 0.45 11.9 8.5 1 23 367 389 367 390 0.94

3 11 0.23 22 6.5 2.6 1 23 394 416 394 416 0.97

4 11 0.0015 0.14 13.4 1.8 1 23 421 444 421 444 0.98

5 11 0.0032 0.3 12.4 0.2 1 23 448 471 448 471 0.94

6 11 0.0097 0.92 10.9 0.3 3 21 485 503 484 508 0.93

7 11 1.3 1.3e+02 4.2 0.4 2 23 547 569 546 569 0.94

8 11 0.0096 0.91 10.9 0.6 2 20 585 603 584 606 0.91

9 11 5.4e-05 0.0051 18.0 1.6 1 23 612 634 612 634 0.99

10 11 8.5e-06 0.00081 20.5 5.2 1 23 641 663 641 663 0.98

11 11 3.1e-05 0.003 18.7 1.9 1 23 669 692 669 692 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.061	5.8	8.4	3.0	1	23	338	360	338	360	0.98
2	11	0.0047	0.45	11.9	8.5	1	23	367	389	367	390	0.94
3	11	0.23	22	6.5	2.6	1	23	394	416	394	416	0.97
4	11	0.0015	0.14	13.4	1.8	1	23	421	444	421	444	0.98
5	11	0.0032	0.3	12.4	0.2	1	23	448	471	448	471	0.94
6	11	0.0097	0.92	10.9	0.3	3	21	485	503	484	508	0.93
7	11	1.3	1.3e+02	4.2	0.4	2	23	547	569	546	569	0.94
8	11	0.0096	0.91	10.9	0.6	2	20	585	603	584	606	0.91
9	11	5.4e-05	0.0051	18.0	1.6	1	23	612	634	612	634	0.99
10	11	8.5e-06	0.00081	20.5	5.2	1	23	641	663	641	663	0.98
11	11	3.1e-05	0.003	18.7	1.9	1	23	669	692	669	692	0.95

Sequence Information

Coding Sequence: atgaaatgcTGCGTGCCTTATTGCTCGAGTAACTCGAAACATGCTGCGAAATCCAAGGGAATCACGTATCATATgtTTCCAAACCAGAAATCTCATCGTAAGACGTGGCTCCAAGCTATTGGAATGATAGATTCTGAGGTAAAGGATCACAGCATGATATGCTCCAAACACTTCCTACCTAAAGACATTTATGATACATCAGGCGGTCAACGAAGAATTCGTAATGGAGCTGTGCCTATAAAATTCaagGTGTGCCGAATATGCCTCGCAATCAACTGTATACTATATCCAATGAGCATTTGTAATTTGGGACAAGCGTTCCAACATATCACTGGATTAACTGTCACAGCGGAAGATGGGTTGCCACAACAAGTCTGTACAGAATGTGCGACAAGACTGTCGAATTGTTACAAATTTAgagaaaaaagtttaaaagcaAACACTATAATGTTGGAGATATTAAAGGGACAAGaatatCTATCAATAGCAGATATAAAATCTGTAGACAGAGAGAACAATTTCCTAGcatcaaatttaattattaaaaattatgaagtGGACTATGCAGATTTTAATGTAACGTATGAAGAAAAAACGGAAGCAAGAGATATCGACGTGAAAAGTGAAGTCGATGAAATATATTTCACGGAGAATGATGATGTAAATAATGACAATCATGATATTAATCATCAGAATGACAGTGACGATGATTTTAAGAATAGCGACGCGGATAACGATGAGAATGATGCTGATTTAGATTTTTCATCTGACGATAGTATACCATTGGAGAAacagaggaagaagaagaaaagagtAGAAAAGAAGACTGTTAAAGTCAGGAAAAAACAGcCAAAAAAAGTACAATCAGAGCCAAAAATAGACAGACGTAGAAAACCATTCCTGAACGACGATCTGAACGAGACATTGTTCACGATCACAGATCTGACGTACGACGAGCAAGTGGGTGAAATAGAGAAACGGAGGGAGAGTGCCAATTATAAGAACTCCTCCTTCAAATGTCAGGAGTGCTTCAAGGGGTTCCTTGACGAACACGCGTACTCTACCCACATGTCCAGGCATACCAATGAATGCGGTGAGCACGAGTGTGGCATATGCAAGACCCATTTCAAACACCCCCACGCGCTTCGCAAGCATATCACGGCGCACCACAGCCAGCGCTTCAGCTGTAATCAGTGCTCGTATGTGACGACGCATAGGCAGACGGCCAGGCTGCACGAGCGATGGCACAAGGGCACCAAGTACCAGTGTCCGCATTGTCAGGAGGAATTCGTTAAATTCACAACATACATGGGTCACATACGTATCAAACATCCGTCGGACTTTGTTTGCGAATTGTGCGGCTATTCCTTCGTGAGTGCGAAAGGGATAGAGCTACACAAGAAGTTGAAACATCGATTGGAAGATGCGCAGATACCGGATGACGGTCCATTTTGCGAGCTCTGTAACGTCCGCTTCGTCTCCCAAGAGGCGTACCGGCGGCATCTGAGCGTCTCCGGACGCCATTCCGACAAGATCGACCCGAAAGGAAAGAGACCGAAGGAAAGGAAGGAGAAGAAGAGAGAGATCGACGACAAGAGACTGTGTAGGAACCAGTTGAGGAGGGCTGAGGGTCCTATACCGTGTGAACAGTGTGGACTGCAATTGGAAGATTCTAGAGCGTACCACGGCCACTTCAGACGGATGCACCCGGACAAGAATCGAACCAACTACCCGTCCATGAAGACGCCGTGCATGTGCGAAGTGTGCGGCCGGATGTTCCAAAGCTACGCGCTCCTAAAGGATCACACGTGGGTACACACGGGCGAGCGGCCTTTCAAGTGCGACTCGTGCGACAAGTCGTTCCGCATGAAGCAGCGGCTCGTCGCGCACCGCCGTGTGCATAGCCAAGTGAAGCGTACGTACGTTTGCAACGTTTGCGGGAAGCACTTCAGCACGCACAGTAACCGCCAGAGGCATATGTTTATCCACACGGGCCTCAAGCCGTTCAAGTGCGAGATGTGCGGCAAAGGGTTCAAGCACTCCAGCGAGAAGCGCGCTCACATAACATACGTGCACCTGAAGAAGCCCTGGCCGAAGCGCACTAGGGGGAAAAGGCGCTTGGACGGACGGCCGGGGCAAATACAGCCTCCGTCCCTCCCCACCAGTGGTAGCGAGATGGATGTCCAGCCAATATGGCCGCCGTGTGATCCGAAATTGAATGAGATCAATTCGATTATTGATGACAAGCcgatgtattataatttaaaacaagttATATAA
Protein Sequence: MKCCVPYCSSNSKHAAKSKGITYHMFPNQKSHRKTWLQAIGMIDSEVKDHSMICSKHFLPKDIYDTSGGQRRIRNGAVPIKFKVCRICLAINCILYPMSICNLGQAFQHITGLTVTAEDGLPQQVCTECATRLSNCYKFREKSLKANTIMLEILKGQEYLSIADIKSVDRENNFLASNLIIKNYEVDYADFNVTYEEKTEARDIDVKSEVDEIYFTENDDVNNDNHDINHQNDSDDDFKNSDADNDENDADLDFSSDDSIPLEKQRKKKKRVEKKTVKVRKKQPKKVQSEPKIDRRRKPFLNDDLNETLFTITDLTYDEQVGEIEKRRESANYKNSSFKCQECFKGFLDEHAYSTHMSRHTNECGEHECGICKTHFKHPHALRKHITAHHSQRFSCNQCSYVTTHRQTARLHERWHKGTKYQCPHCQEEFVKFTTYMGHIRIKHPSDFVCELCGYSFVSAKGIELHKKLKHRLEDAQIPDDGPFCELCNVRFVSQEAYRRHLSVSGRHSDKIDPKGKRPKERKEKKREIDDKRLCRNQLRRAEGPIPCEQCGLQLEDSRAYHGHFRRMHPDKNRTNYPSMKTPCMCEVCGRMFQSYALLKDHTWVHTGERPFKCDSCDKSFRMKQRLVAHRRVHSQVKRTYVCNVCGKHFSTHSNRQRHMFIHTGLKPFKCEMCGKGFKHSSEKRAHITYVHLKKPWPKRTRGKRRLDGRPGQIQPPSLPTSGSEMDVQPIWPPCDPKLNEINSIIDDKPMYYNLKQVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00947954;
90% Identity: iTF_00947954;
80% Identity: iTF_00947954;