Basic Information

Insect: Malacosoma neustria
Gene Symbol: ZIPIC
Assembly: GCA_963693495.1
Location: OY856393.1:6789237-6810005[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 9.3e-05 0.0089 17.2 2.8 1 23 164 186 164 186 0.98

2 12 0.14 14 7.2 1.4 1 23 194 217 194 217 0.93

3 12 0.0031 0.29 12.4 3.9 1 23 312 334 312 334 0.99

4 12 0.044 4.2 8.8 2.2 2 23 343 365 343 365 0.97

5 12 2.9 2.7e+02 3.1 6.5 1 23 369 391 369 391 0.97

6 12 0.0006 0.057 14.7 2.7 1 23 396 419 396 419 0.98

7 12 0.0004 0.038 15.2 0.7 3 23 425 446 424 446 0.96

8 12 0.097 9.3 7.7 0.1 1 20 465 484 465 486 0.94

9 12 0.7 67 5.0 0.3 3 23 533 554 531 554 0.90

10 12 2.4e-06 0.00023 22.2 1.2 1 23 563 585 563 585 0.98

11 12 0.00012 0.012 16.8 0.6 3 23 593 613 591 613 0.97

12 12 3.8e-06 0.00037 21.6 2.6 1 23 619 642 619 642 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	9.3e-05	0.0089	17.2	2.8	1	23	164	186	164	186	0.98
2	12	0.14	14	7.2	1.4	1	23	194	217	194	217	0.93
3	12	0.0031	0.29	12.4	3.9	1	23	312	334	312	334	0.99
4	12	0.044	4.2	8.8	2.2	2	23	343	365	343	365	0.97
5	12	2.9	2.7e+02	3.1	6.5	1	23	369	391	369	391	0.97
6	12	0.0006	0.057	14.7	2.7	1	23	396	419	396	419	0.98
7	12	0.0004	0.038	15.2	0.7	3	23	425	446	424	446	0.96
8	12	0.097	9.3	7.7	0.1	1	20	465	484	465	486	0.94
9	12	0.7	67	5.0	0.3	3	23	533	554	531	554	0.90
10	12	2.4e-06	0.00023	22.2	1.2	1	23	563	585	563	585	0.98
11	12	0.00012	0.012	16.8	0.6	3	23	593	613	591	613	0.97
12	12	3.8e-06	0.00037	21.6	2.6	1	23	619	642	619	642	0.98

Sequence Information

Coding Sequence: ATGCCAgttttatcatatttaaatttggAGAGAACTAACTATGAAAAAGTAGAATTCAAATGGGCAAAACAAAATCGAATAGATTTTGTGAACAAACATGTTATACCCGTTGCGCACCATAGTAcatttgatgatgatgaagatataTCTATTGAAGGACTCATTAACAATGGGAAGAAAGAAGTTGATATTAAATCAGAAAATCAGGAGCCTGAActattaaaagataatatgtTAGTTAACTTTGgattagatgatgatgatgcaaatgattttatgaataatacagATGACTTCATTAATAATGATAGCGCAAATGATTTTTGTAATGATGATGAAGATGCGATTGACACAAAAGAAgagtgtataaataataaaaatgataaaaaaggaattaaattaaaagaagaatatgCTGATCTATTTCCAATTACAACAAAAGAAGCTAAAGCAGTGTATGAAGTGCGGAAACTTTTTCAAAATGGTATTTACCACTgtgatatatgtaaatattcatTTAGTAATGAAGAAAGATTGAATGTACACAAGAGGATGCATGATACACACGTTAGTGGAACTTATTTCTGTGATATATGCATTTACTATTACAAGACACAGTTCCTGCTTCAAACGCATATAACTGAGAAACACATGTATAAGTATGTCTGTAGGAAATGTCCTGAAGTCAATTTTAATAGAGCAGCAGCAAAACATCATTTCGTAATAAGTcatataaaatcaaatacagAAAATGATTGGCATAAAGTAAGACCTAACTGGCTGCGGAAGAAGTCATTACAACGTATAAAAGTGCACAAAGCGGTGACAAGACGTCTACCAAAAGACTTTCTTGTATATTCACCAGTGAGTCAGGAAGAGCAATATTCCATAGTTCTAGAAAGGAGGAACACAACTAACTATATGGAGTCAAAGTACAAATGTGAGTTTTGTTTTAGAGGATTCAGAGAGGAAAAGACATATAGTAAACATATGCAAAAACATGATCCgACAATATCCGGCAATGCCCAATGCGATATGTGTAAATTCTATTTCAAAGACACAAGAAAGATGTACAATCATATGAACATTacgcatttatttaaatacacatGTCAAGTATGTCAATTTATCTGCTATAAGAAAAGTCAAGCTCACACTCATTACAAGTGGCACAAAAATGTCGCATATTCGTGTCCACACTGTGAAAAAGTATTCTAcAAAATATCAACTCGTCTAACTCATATACGAATGAAACATCCTTCTACGAATATATGCAACCTCTGCGGCCATAGCTTCGTCAGTGAGACTGGTTTGGAGCGCCATAAACAAATTTCCCATACAAAACAGGAGATAGAACTGAGCGACTCGATAAAGACAGACCCGAATGACCGATTCTATTGCGCGGACTGCAACGTTCAGTTCATAAACGAGACCGCGTTCGCAACTCACCTTGGCAGCTCCAACAAACATGCCTCTATTAACATCTCGAGCAAACCTAACCGGAGATCTCTGAGAGAGGACGACCGTAAGCAACGAGGCAGACCGAGGAAGTTGTGTTCGGAAATCATCAATAAAGGAATCTCCACTTCATCAAACTGTGAAGTGTGTGGCAAATTTCTAGCAAACGACCTGCAAACCCGAAAACATTATGAATCAGAGCATCCCGGGACGGAGTACCTCAAGAGATACATGTGTGATGTCTGTGGACATACAACAAGGCAATACGTGAATCTGATGGCGCACATGCGCACGCACACGCGCGAGAAGCCCTACGGCTGCCCGCACTGCGACCGCCGCTTCAGCATGCCCAGCAACCGTGACCGGCACATTATTgtTCACACAGGTGAGAAAAAATACCAATGTCAACACTGTAACCGTCGCTTTACACAGAGCAGTGCAGTGAAACTTCACATACAGACTGTCCATATGAAAATCCCCAAACGCACCGTGGGACAAGAAGAACCGGAAGCGTAG
Protein Sequence: MPVLSYLNLERTNYEKVEFKWAKQNRIDFVNKHVIPVAHHSTFDDDEDISIEGLINNGKKEVDIKSENQEPELLKDNMLVNFGLDDDDANDFMNNTDDFINNDSANDFCNDDEDAIDTKEECINNKNDKKGIKLKEEYADLFPITTKEAKAVYEVRKLFQNGIYHCDICKYSFSNEERLNVHKRMHDTHVSGTYFCDICIYYYKTQFLLQTHITEKHMYKYVCRKCPEVNFNRAAAKHHFVISHIKSNTENDWHKVRPNWLRKKSLQRIKVHKAVTRRLPKDFLVYSPVSQEEQYSIVLERRNTTNYMESKYKCEFCFRGFREEKTYSKHMQKHDPTISGNAQCDMCKFYFKDTRKMYNHMNITHLFKYTCQVCQFICYKKSQAHTHYKWHKNVAYSCPHCEKVFYKISTRLTHIRMKHPSTNICNLCGHSFVSETGLERHKQISHTKQEIELSDSIKTDPNDRFYCADCNVQFINETAFATHLGSSNKHASINISSKPNRRSLREDDRKQRGRPRKLCSEIINKGISTSSNCEVCGKFLANDLQTRKHYESEHPGTEYLKRYMCDVCGHTTRQYVNLMAHMRTHTREKPYGCPHCDRRFSMPSNRDRHIIVHTGEKKYQCQHCNRRFTQSSAVKLHIQTVHMKIPKRTVGQEEPEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00948271;
90% Identity: iTF_00948271;
80% Identity: -