Basic Information

Insect: Malacosoma neustria
Gene Symbol: -
Assembly: GCA_963693495.1
Location: OY856399.1:7492920-7493885[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0029 0.27 12.5 0.3 1 23 51 73 51 73 0.97

2 8 0.002 0.19 13.1 2.4 1 23 101 123 101 123 0.98

3 8 1.1e-05 0.0011 20.1 0.2 1 23 131 153 131 153 0.98

4 8 3.5e-06 0.00033 21.7 1.0 3 23 161 181 159 181 0.96

5 8 0.00017 0.017 16.4 3.9 1 23 187 209 187 209 0.99

6 8 3.5e-05 0.0034 18.5 3.0 1 23 215 237 215 237 0.99

7 8 0.42 40 5.7 1.6 2 23 247 268 246 268 0.93

8 8 3.2e-06 0.00031 21.8 3.4 1 23 280 303 280 303 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0029	0.27	12.5	0.3	1	23	51	73	51	73	0.97
2	8	0.002	0.19	13.1	2.4	1	23	101	123	101	123	0.98
3	8	1.1e-05	0.0011	20.1	0.2	1	23	131	153	131	153	0.98
4	8	3.5e-06	0.00033	21.7	1.0	3	23	161	181	159	181	0.96
5	8	0.00017	0.017	16.4	3.9	1	23	187	209	187	209	0.99
6	8	3.5e-05	0.0034	18.5	3.0	1	23	215	237	215	237	0.99
7	8	0.42	40	5.7	1.6	2	23	247	268	246	268	0.93
8	8	3.2e-06	0.00031	21.8	3.4	1	23	280	303	280	303	0.97

Sequence Information

Coding Sequence: ATGGAATCGAAATCTGGCGTCGGTATTCAAGACCACTGGTTGAAGAGTATGATGGAGCCGGCGTCTAACGAAAATAACGATCATTCTGTTAAACGTGAGAAAATGGCTGAATTCAACAACGAAACGTATCAAATGAAGCAAACCCGTGTGTTTAGATGTGATGTCTGTGATCTAGCGTTCGATGGCTTGGAATATTTAATGTTACACAAGAAGTTTCATGGTAACGATAAAGATGGGCCCGCGATGGAGCCCGAACCAGAGCCTGTTCCTGTTAAAGAAGGTCCGAAGAAGCGTCGTAAGTTTAAGTGTGATCAATGTGATGTTAAGGTAAATTCGCAATACCATTTAGACATTCATAGAAGTAAGCATGAAGGGGTTACATGCAAGAAGTATATATGTGAGGTTTGCGATAGAAGTTTTGTTGCCGCACAGTTTTTAAAAAGTCACATGCAAACCCATTCAGCGACGAGTACAATCAATTGTGAGATTTGTCACAAAAGCTTTACTGGTCAGGCTTATTTGAAACTCCACATGCAGCTGCACAATGATATTAAGAAGTTCAAATGTTCGAAATGTGACGAAATGTTACCTACGAAAAATTGCTTAAAACTCCACATGAAAAAGCACACAAAAGTGAAGAATTTCAAATGTGATTACTGCAATAAGTTGTTTGTATCGAAAATAACTATGCAAAAACATAGACAAACCCATGAAGGGCAGCCTATAGACTGTTTGGTTAAATGTAACCAATGTGACCGTACGATGCACTCATCGTTAATACGTACTCACATAGCGCGGACTCATGCTTCAACTCTTGATGATGATGTGAAGAGACCGCACAAGTGTACAACGTGCGGAAAAAGTTTTATTGTGAAAATCAATTTAAACCTTCATATTCGAGTCTGCCATCCAGACCTTGCTGAGCCAGAGGACGAAGATGATGACGTTATGACAGACAACTCTTAG
Protein Sequence: MESKSGVGIQDHWLKSMMEPASNENNDHSVKREKMAEFNNETYQMKQTRVFRCDVCDLAFDGLEYLMLHKKFHGNDKDGPAMEPEPEPVPVKEGPKKRRKFKCDQCDVKVNSQYHLDIHRSKHEGVTCKKYICEVCDRSFVAAQFLKSHMQTHSATSTINCEICHKSFTGQAYLKLHMQLHNDIKKFKCSKCDEMLPTKNCLKLHMKKHTKVKNFKCDYCNKLFVSKITMQKHRQTHEGQPIDCLVKCNQCDRTMHSSLIRTHIARTHASTLDDDVKRPHKCTTCGKSFIVKINLNLHIRVCHPDLAEPEDEDDDVMTDNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00779714;
90% Identity: iTF_00432523; iTF_00433410;
80% Identity: -