Mneu014571.1
Basic Information
- Insect
- Malacosoma neustria
- Gene Symbol
- Sall1
- Assembly
- GCA_963693495.1
- Location
- OY856383.1:2493855-2510441[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 3 2.9e+02 3.0 0.3 2 23 5 26 4 26 0.95 2 14 0.32 30 6.1 0.1 1 23 954 977 954 977 0.91 3 14 1.3 1.3e+02 4.2 0.7 1 23 1056 1078 1056 1078 0.96 4 14 5e-05 0.0048 18.1 1.7 2 23 1081 1102 1080 1102 0.96 5 14 5e-06 0.00048 21.2 0.9 1 23 1108 1130 1108 1130 0.99 6 14 0.0086 0.82 11.0 2.5 2 23 1137 1158 1136 1159 0.94 7 14 0.045 4.2 8.8 1.2 5 23 1172 1190 1171 1190 0.97 8 14 0.022 2.1 9.7 2.0 2 23 1196 1218 1195 1218 0.96 9 14 0.009 0.86 11.0 0.1 2 23 1235 1255 1234 1255 0.96 10 14 0.0028 0.26 12.6 1.0 5 20 1265 1280 1261 1283 0.85 11 14 0.0038 0.36 12.2 0.7 1 23 1291 1313 1291 1313 0.98 12 14 0.0052 0.49 11.7 7.2 1 23 1319 1341 1319 1341 0.98 13 14 6e-06 0.00057 21.0 1.3 1 23 1347 1371 1347 1371 0.98 14 14 0.001 0.096 14.0 4.2 1 23 1377 1399 1377 1400 0.95
Sequence Information
- Coding Sequence
- ATGGATCAAGTCCAGTGTCCCGTATGCACACTCTATCTCCACAATGGGATGTCTTTAGAATCCCATTTGGACACGCACCCCAAAGATCAAGTAATTAGAGCATTATGTAGTCTTGCTTCGAAGAGCAGTAGTTATGGAAGTAGAACAACCACTCCGTCACACTCAGAACGATCATACAGAAGCCGTTCAAGGACACCCTTAGATGACGGAAGTAGATGGGGAGGTAGCTCTCACCGATCTTCTGAACATGACCGATACTGGCGCAGAGCACCAAGTAGGACACCTAAGTCAAATCCATTAACCCACTTATCAAATAGCGGGACTCCAGATATAAGAACGGTGGACATAACTTTTGAAAATGATTCATTAAGTCAACATCATTCCAGTGCGAATGTGTATTCGATGAAAGGTGACAAAATGCCACAACCTTTCCCAGCTAGATCTATTCCAGATTTTGAACAGCCATATGGGTGTTATCAAGACCAGCAAGAAGACagggaaataaaatattcccgTAGTGCTGAATATGCTATGGAAAACACAAATAACATGTTTGCATATAATATACCTCCTCCAGCTATGAGGATGCTACCTAACATGATGCCTATACCTAACAATAGACCTGAACATGTTAAGATATTTTCCAAAACTAACAATATAGTAGGAAATACAAATATAGGTGGAATGCAATACATGCCTCCGGCAGCAAAACCTATGCACCTTATGGTGACAGCACCGGCTTTTGTAcagaaaaataatacaataattacagGCACTGCACCAACCTCTCGGGTTCagatagaaacaaaaacagtaGCTTCACCTTCACTATCCACAAATCAATTCAGCCAACTACCAAATGGATCGTTCACTCCTGGAACTACAGTAGTGACTCAAAACTCTTTAATTTATCGTGAAATGGTGCACAATATTGATGGGAAACCATTTATGCCAAATATGCCTTCTATGTTAGGTGCAGGAGCCAATAGTATCACAAATGTTGCTCAAAGCACATCTATGTACCAAAATGTGATGGTAGTGGACCAGTTTGGTGATGCTTCATGTATGTACCCTCCTCCTCAGCACTTATTTCCAAAGACAACCACAACATCTATGTACGAGACAGACAGCATGTCCATAAACAGTTCAGATAAGTGTcttgaaaattttaatgatCCCAAGACATTGATTATTGAAGTTAGTCCCATAGCCCCCAGTATTTCATTGAGCTCTTGTTCTACACCAAACTCACAGCCATTGCCTGATATTAGTAAGCCAGATATAACTATTACGGAAAAAGTAGATACTAAGAATGATGGGGTGAATAAAGGCCTCAAAATTCTTAGTAACATTAAAGTGGAAGTTCCTGTACAGCataataaaaacatgataaATACAATAATGGACTTAACTGGATCCAGTGATTTGGATTATTCTATTAAAACAGATTTGTCTGACAAAACACTGTTAGAGATGGAAGAGAAAGATagtcttaatttaataaatgatgcTCAACCTTCAATATCCAGTAGTGATAGTGTAGTTTCAAATACattttctgtaataaaaaatgttggcAACCCATCTTTACATAAAGATCCAATAAGCAAGTTAAATGTGGATACTAAGATGGATATAGACACAGACAGCTGTCCTGTGCCTGACCTTATTTGCAATGAGAAACCATCAATATCTCCTTGTAGTGAATTATCAGACCATGGAGACAGCTCAACTGACCATTCTCTTTTGTCCCCCAAACCTGAGGAGTGCCGAAGTCCCGTAGAAAATAAGTTTCGGGAACCAGTAAAGTCATTTAAAACAAATCCATTGAGGcttaacaatatatttgttaaaaaacacaaaaaagtgttaaaaataaagaatgcCAAGTATACTTCAACTATTACTGTAACCAAGTCAGAAGAAACCCTGCCTTCATCTTCAtcgaatattataaattcaggaaatttaaataaatttgacgaAGAGAAGACAAGTTCAAAATCTACTCTTCAAACCATATCTATTGAGGAAATCAAGCAAAATGATGGTAATGATGAACAAAAGTATGATGCCGATACAAAGGAGCAGTCAATGGAACTGGAGCCAATTGTGCCATCAAATGTGGAACAATCTGAAGAGTTTGGTAACTCAGTCGAGGTAAAAGAAGAGATTGTTTCCATCAATGAAGGAAGTTTTAGTACCCGGACTACAAACTCTGAGCAGAATATCACTCCATTGAGGCCTATTAATGTAATCACATATGGCAATATTCCTCCTGGGGAATTTGATGAAGAGTCCAACCACAAGGAGCTCTTGGATCTGGAATCAGcatcaaaaaataaacagtttgTTAGCATGATGAATGATAATTATTTTGgtgataataatatgtatgccGATTATTTCACCCCTGATCGGGATGAGTCCTTCCACAGTGAAAGAGAGGCTACACCAAAGGAGGGCACCTATGGCATATGGGGTGAAACCTCGCAGAAggaaaataattttgtgttacCTAGTTTTATCCATGAGAGTTACAAGATAGCTGAGAGCGAAACTAATTATTCGGAGTTAGGTGGGACGCAGGAGGGGGATAGTAAAGATGTGTTGAGCGAAGGAGAGCCGGCCTTGAACATCTGCTCTGACGAGCGTATGCCGCCACGTGGGGAACTCAGTGGTCAGGAGAGCAACGGCGACACGGAGCCACCCTGGACTGGGATGTATTCGGAGGTGACACAGTCAGAGCCGTACGACTTGATTGCCCGTGAGAGTTGGGTCTCCGATGGCTCGGATGTCGATGTTGCAGAGAAAGGGGAAAATttGGAAGAAGAGATACAGTATCCAAAGAGCCGAGTTCACTCGTGTGTAGAATGTGATGCTAAATTGCCCTCGTTGAAGGAGTTAAGGGCTCACAAAGCACTCGTCCACGCTTTGCCTACATGTTCTAGTACAAAGACATCATATAGCCGCATGATGACAGCGAGAACCATTAAAAAAGAGGAGAAAGTTGAAGAAACAACTACCCTACTTACTGgTAATCTGCTAACAATTGATTCGAAGGAATCAATAACGAGTTCAATACTGCATGTGTACGACTCCGTTGACACCAAGACCAAGTTAGAGAAGCTCATCAAGAAAGAGCCCAAGAAGAGGAAGCACGACTATGTATGCCCTACTTGCAAGGTGGACCAGGGTTCGAATTCGGCGTTTCACCAGCACCTTAAGGTGCACCCGCTGGAGTGCTTGACGTGCGGGAAGTGTTTCTTCCGGCGCGCCAACCTCGCGCTGCACGTGAAGACACATCTCGGCATCAAAGAATACAAGTGCGAGGTGTGTGAGAAGAGTTTCGTGACGCGACAGAAGTTGACGGAGCACCAGAACGTGCACACAGGTCGCGCGCCGATCAAATGCACCCTCTGCGATGACACCTTCCGCCGGTACTCTAACATGGTGCAACACAGAGCGCGCCATCACCAACAAAGGCGTTCGAAGGTAAAAGATTACATATGCGACTGCGGCGCGGTGTTTCACACGAAGGCGAAGCTGCGGTGGCACAAAGAGACGCACGAAGAGCGGCCCAAGTCGTGCCTCTACTGCAGCGACAAGTTTGTGCACGCCGCATCGCTCACGCGCCACGTGCGCCGCACCCACAACGAGTACTTCATAGCCGACACCATCAAGGGCAAGACTGACAACGTGCCCTGTCCCGTCTGCAAACAGATATACCTAAGATCAAACCTTCGCGCCCACCTGCTGACGCACACCGGGAAACGCCCATTCCTGTGTATAGTTTGCAACAAATCGTTCTCGAGTAAAGGCAATCTGAAACTGCACAGATGGACGCACATGTCGCGCTCCACTAAACCGTACAAGTGCAACCTGTGCAAGGGGGCGTTCATCAGGCACGCGGAGTACGTGTCGCACATGAACGCCCACAAATCCGTCCGGCCGTACACGTGCAACTACTGCGGCTGTCAGTTCATTAGGAAATACAATTGCCAGCGACACGTGAGGGAGCACGAGATGGCCAAGAAGTACGTGTGCAAAGTACCCGAGTGCGGGAAGTCGTTCCACCGCAGTTATTATCTGTCTGAACACATGAAGGTGCACAGTGGGGCGCGGCCGTTCGCGTGTAACATATGCGGAAAGACGTCTAGCAATAAATCCAATCATAATAAACATGTGAAGATACATCACGCGAGAGAACCGGTCGCCACTGAGGCGTAG
- Protein Sequence
- MDQVQCPVCTLYLHNGMSLESHLDTHPKDQVIRALCSLASKSSSYGSRTTTPSHSERSYRSRSRTPLDDGSRWGGSSHRSSEHDRYWRRAPSRTPKSNPLTHLSNSGTPDIRTVDITFENDSLSQHHSSANVYSMKGDKMPQPFPARSIPDFEQPYGCYQDQQEDREIKYSRSAEYAMENTNNMFAYNIPPPAMRMLPNMMPIPNNRPEHVKIFSKTNNIVGNTNIGGMQYMPPAAKPMHLMVTAPAFVQKNNTIITGTAPTSRVQIETKTVASPSLSTNQFSQLPNGSFTPGTTVVTQNSLIYREMVHNIDGKPFMPNMPSMLGAGANSITNVAQSTSMYQNVMVVDQFGDASCMYPPPQHLFPKTTTTSMYETDSMSINSSDKCLENFNDPKTLIIEVSPIAPSISLSSCSTPNSQPLPDISKPDITITEKVDTKNDGVNKGLKILSNIKVEVPVQHNKNMINTIMDLTGSSDLDYSIKTDLSDKTLLEMEEKDSLNLINDAQPSISSSDSVVSNTFSVIKNVGNPSLHKDPISKLNVDTKMDIDTDSCPVPDLICNEKPSISPCSELSDHGDSSTDHSLLSPKPEECRSPVENKFREPVKSFKTNPLRLNNIFVKKHKKVLKIKNAKYTSTITVTKSEETLPSSSSNIINSGNLNKFDEEKTSSKSTLQTISIEEIKQNDGNDEQKYDADTKEQSMELEPIVPSNVEQSEEFGNSVEVKEEIVSINEGSFSTRTTNSEQNITPLRPINVITYGNIPPGEFDEESNHKELLDLESASKNKQFVSMMNDNYFGDNNMYADYFTPDRDESFHSEREATPKEGTYGIWGETSQKENNFVLPSFIHESYKIAESETNYSELGGTQEGDSKDVLSEGEPALNICSDERMPPRGELSGQESNGDTEPPWTGMYSEVTQSEPYDLIARESWVSDGSDVDVAEKGENLEEEIQYPKSRVHSCVECDAKLPSLKELRAHKALVHALPTCSSTKTSYSRMMTARTIKKEEKVEETTTLLTGNLLTIDSKESITSSILHVYDSVDTKTKLEKLIKKEPKKRKHDYVCPTCKVDQGSNSAFHQHLKVHPLECLTCGKCFFRRANLALHVKTHLGIKEYKCEVCEKSFVTRQKLTEHQNVHTGRAPIKCTLCDDTFRRYSNMVQHRARHHQQRRSKVKDYICDCGAVFHTKAKLRWHKETHEERPKSCLYCSDKFVHAASLTRHVRRTHNEYFIADTIKGKTDNVPCPVCKQIYLRSNLRAHLLTHTGKRPFLCIVCNKSFSSKGNLKLHRWTHMSRSTKPYKCNLCKGAFIRHAEYVSHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFACNICGKTSSNKSNHNKHVKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -