Basic Information

Insect: Malacosoma neustria
Gene Symbol: -
Assembly: GCA_963693495.1
Location: OY856393.1:6766647-6785339[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 5.3e-05 0.005 18.0 3.6 1 23 237 259 237 259 0.98

2 12 0.22 21 6.6 2.8 1 20 267 286 267 290 0.88

3 12 0.85 81 4.8 0.1 1 23 294 317 294 317 0.94

4 12 0.00035 0.033 15.4 2.5 1 23 386 408 386 408 0.98

5 12 0.057 5.5 8.4 7.6 1 23 416 439 416 439 0.98

6 12 0.00013 0.012 16.8 4.4 1 23 470 492 470 493 0.96

7 12 0.00044 0.042 15.1 5.1 1 23 497 520 497 520 0.97

8 12 0.036 3.4 9.1 0.2 2 22 540 560 539 564 0.92

9 12 4 3.8e+02 2.6 0.2 3 23 594 615 593 615 0.84

10 12 0.007 0.66 11.3 0.4 1 23 624 646 624 646 0.98

11 12 3.4e-09 3.2e-07 31.2 0.9 1 23 652 674 652 674 0.99

12 12 6.9e-06 0.00066 20.8 1.1 1 23 680 703 680 703 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	5.3e-05	0.005	18.0	3.6	1	23	237	259	237	259	0.98
2	12	0.22	21	6.6	2.8	1	20	267	286	267	290	0.88
3	12	0.85	81	4.8	0.1	1	23	294	317	294	317	0.94
4	12	0.00035	0.033	15.4	2.5	1	23	386	408	386	408	0.98
5	12	0.057	5.5	8.4	7.6	1	23	416	439	416	439	0.98
6	12	0.00013	0.012	16.8	4.4	1	23	470	492	470	493	0.96
7	12	0.00044	0.042	15.1	5.1	1	23	497	520	497	520	0.97
8	12	0.036	3.4	9.1	0.2	2	22	540	560	539	564	0.92
9	12	4	3.8e+02	2.6	0.2	3	23	594	615	593	615	0.84
10	12	0.007	0.66	11.3	0.4	1	23	624	646	624	646	0.98
11	12	3.4e-09	3.2e-07	31.2	0.9	1	23	652	674	652	674	0.99
12	12	6.9e-06	0.00066	20.8	1.1	1	23	680	703	680	703	0.98

Sequence Information

Coding Sequence: ATGAGCAGAACAAATCGAACATGCTTGGTTTGCCTTCGTATGAATGTAAAATTAACCAGTTTAATGACTGGGTCATTGAGACATAATTTTGAACTGATTTCAGGCATTGATACATCTAATGCAGAGTTACCTCAATACCTCTGCTTCGAATGTGTAGCGCATGTGAGACGTTTCATCAAGTTTAGAGATAAATGCCACCGGTCAGTTGGTTATTTACATGTAATGTTAAGCAAAAATAATAAGCTTGATGTGAGTTATTTAATGTTAGAGGACAGAAAAGATTTGCAAATAACTCCAGATCTTTCATATTTGAATGAGGGGAAAACCTATTATGAAGAAATCATACatgagtttaataataaaaatgaaagaaTAGAGTTAAGGACAAGTTGCATACCAGTAATACATTATGGTATTGATGATAGTAATGgaaaaaatgatataaaaagtGAAGATGTTAAATTAGAAATAGATGTATTAGGATTCAATGAGCTAGATGATGTTGGTAATGATTTTAATAGAGAAATTGATGATGATATCAGTAATTTCAGTGAAGTAAGTGATGATAATAGGAACGATTATGCAAAAGATGATAAACAAGAAGAAGAACCAAGAATTgaagaaaataacttttttttgcaTCCACTATCTATTAAAGAGGCTAGAGCAGtggcaaaaatatataatatgaaaccAAAAGTTGGCAATTATAACTGTACAGTTTGCAACAAATCATTTACTACTAGACTAGCATTTACTCATCATATTAAGTTGCATGaaaaaTACAAGGATAGTCCGCATCGCTGTGACATATGCCATTATTACTTTGAAAGTGAGCAGCGACTGCAATCGCATAATGCGGAACAACACATGTACAAATATGTGTGTAAATTATGCCCTGAAGTCAATTATGATAGtgTGTCAGCAGGACGACACATGTTAACGagccataaaattaaaatgaaatcaaATGTGCCAAAAGTAAagcataaaacaaaaaagtctCCGAAAATAGTGAAAACACAGGAAAAAGTGAGAAAACAAGAAAAGCCCAGAATAATGGATGATTTATTCGATAAAACTTCTATAACTCACGAAGAACAATACAGTATGGTGCGAGACAGGATGAAGTCTAAAAACTACATCAATTCACCGTTCACATGCCAATTGTGTTTTAAAGGATTTAAAAGGGAAAAGACGTTTGACAGGCACATGCTCATACACGATCCTGCTATATCGGGAAAATATCAATGCGACATGTGTAAATtatgttgtaaaaataaaacaaaaatattcaaacataTAAGCACGACACATTTGTACCAGTATTCGTGTCGATCGTGCAGCTTCATCAGCGTATCTAATTCTCGAGCCAACATACACGCCAGGTGGCATCAGAACGTAACGTATCCCTGTTCATACTGCGACAAAGTGTTCACGAAGCCTTCTACTTGTTTTTCCCACATCAGGATACATCATCCTTCAATGTACATTTGTAAACTCTGCGGACACAGTTTCATAAATGAGAACGGACTCAATCATCACATAAAACGCTGTCACAAAGAGGAGgaaataaatCCCAGTGAACCTATGCCAGTGGACAAAACAAGCGAATTGTATTGTGCCGAATGCAACATCCAGTTCGTAAACGAGGTGGCATTCGAGACGCATTTGCGAAGTTCCAACAAACACGTCTCGTTCAATTTTGCATCGCAGCAAACTGGCCCTATCGCAAAGCGGCCGATGGCCAAAAGCCTGGTCAAAAGCACAAGTTCTGACTGTACAGTGtgtGGCAAGTACCTGCTCAGTTACGAGCTGGCCAAGAAGCATTACAAAGTGGAGCACCCCGGGGTGGAGTTCTTTAAGAGATACATGTGCGATTATTGTGCCTTCAGAACGGCTaatgCTCAAACTTTATCGAACCACATCAACAGACACACTAAGGAGAAGGAATACAAATGTCCAATATGCGATAAGAGCTTCGTCCAATCATACAACATGAAGCGTCATATTAGGgtACATACAGGTGAAAAGCCATACGTGTGCGAGCATTGCAACAGGGCCTTCTCTGATAGGAACGCGATGAAACTTCACATCAAAACGGTACACCTAAAAATACCCCATCTGCAATGGAGTAAGGCGTATCGTATGAAAATGAAAGAAGCCAAACGGAGATTTGAggaattgtaa
Protein Sequence: MSRTNRTCLVCLRMNVKLTSLMTGSLRHNFELISGIDTSNAELPQYLCFECVAHVRRFIKFRDKCHRSVGYLHVMLSKNNKLDVSYLMLEDRKDLQITPDLSYLNEGKTYYEEIIHEFNNKNERIELRTSCIPVIHYGIDDSNGKNDIKSEDVKLEIDVLGFNELDDVGNDFNREIDDDISNFSEVSDDNRNDYAKDDKQEEEPRIEENNFFLHPLSIKEARAVAKIYNMKPKVGNYNCTVCNKSFTTRLAFTHHIKLHEKYKDSPHRCDICHYYFESEQRLQSHNAEQHMYKYVCKLCPEVNYDSVSAGRHMLTSHKIKMKSNVPKVKHKTKKSPKIVKTQEKVRKQEKPRIMDDLFDKTSITHEEQYSMVRDRMKSKNYINSPFTCQLCFKGFKREKTFDRHMLIHDPAISGKYQCDMCKLCCKNKTKIFKHISTTHLYQYSCRSCSFISVSNSRANIHARWHQNVTYPCSYCDKVFTKPSTCFSHIRIHHPSMYICKLCGHSFINENGLNHHIKRCHKEEEINPSEPMPVDKTSELYCAECNIQFVNEVAFETHLRSSNKHVSFNFASQQTGPIAKRPMAKSLVKSTSSDCTVCGKYLLSYELAKKHYKVEHPGVEFFKRYMCDYCAFRTANAQTLSNHINRHTKEKEYKCPICDKSFVQSYNMKRHIRVHTGEKPYVCEHCNRAFSDRNAMKLHIKTVHLKIPHLQWSKAYRMKMKEAKRRFEEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -