Mneu007393.1
Basic Information
- Insect
- Malacosoma neustria
- Gene Symbol
- -
- Assembly
- GCA_963693495.1
- Location
- OY856376.1:15823244-15833647[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0037 0.35 12.2 1.0 3 23 207 228 206 228 0.96 2 23 0.23 22 6.6 0.2 1 21 615 635 615 636 0.96 3 23 5.2 4.9e+02 2.3 0.3 1 22 678 699 678 701 0.82 4 23 0.0052 0.5 11.7 1.9 2 22 711 731 710 731 0.94 5 23 0.97 92 4.6 0.1 2 23 739 761 738 761 0.93 6 23 0.015 1.4 10.3 0.2 3 23 782 803 780 803 0.95 7 23 0.0023 0.22 12.8 1.3 1 23 809 832 809 832 0.92 8 23 0.096 9.2 7.7 0.0 1 23 856 879 856 879 0.90 9 23 0.014 1.4 10.3 3.4 1 23 884 906 884 906 0.97 10 23 0.06 5.7 8.4 0.1 1 23 912 935 912 935 0.95 11 23 0.0018 0.17 13.2 1.3 1 23 948 970 948 970 0.97 12 23 0.0011 0.11 13.8 4.0 1 23 1021 1044 1021 1044 0.96 13 23 0.003 0.28 12.5 1.8 1 23 1103 1126 1103 1126 0.96 14 23 0.00072 0.068 14.4 2.0 2 23 1145 1167 1144 1167 0.95 15 23 0.018 1.7 10.0 0.1 2 23 1173 1195 1172 1195 0.94 16 23 0.062 5.9 8.3 0.1 1 21 1239 1259 1239 1260 0.94 17 23 0.00095 0.09 14.0 0.6 1 23 1270 1292 1270 1292 0.93 18 23 8.6e-05 0.0082 17.3 0.3 2 23 1381 1403 1381 1403 0.93 19 23 1e-06 9.9e-05 23.4 1.4 3 23 1410 1430 1409 1430 0.98 20 23 0.0035 0.34 12.2 0.8 1 23 1452 1474 1452 1475 0.95 21 23 0.033 3.1 9.2 0.0 1 23 1497 1519 1497 1519 0.98 22 23 0.0042 0.4 12.0 0.4 1 23 1525 1548 1525 1548 0.96 23 23 0.0003 0.029 15.6 0.8 1 23 1556 1579 1556 1579 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAACTACGATCGTGTTTGTAGACTGTGCTTGTCATTTCGAGGCGAATTACTGCCGATATTTCCTACCACCAGTTCTGAAGACACGGAATCTCCCGTCCTCGCCTCGAAAATTAAGGATTGCGTATCTATTCAGATAAACGAGAATGACGACCTGCCGACAAATGTCTGCAAAAAGTGTATGGACAATGTCAATAACTGGCATATATTCAAATCTGTCTGTGAGAGGACACAAATTAAACTGCAGtctcttacaaataaagaggGCAGCCAACTAGAAGAGGTGAAtattaagagtgaatttgtTGATGAAGCTTATGATGATGGGGTTGTTATTGATGGGGCATACCCTGACAATGAGAATGTTGAATCTACCAGCAAAGTGCAGTCAGAAGGGCCTCCCATATTGGCTTCATTGGGGCTCACACCAAAAAGTGACAAGggAGAAGACAGTGATAAGGAAGAAGGTGAGGaggaaataaatgaaaatgaagTTAATGAACAGAATTATCCAAAAATACCAAACATACCTGAGGTATCAATCACCGTCATGCGCCCTACTGGCGAAACCCTGCACGCTAGGCAGGGAATACAACAGTTAGCGTCCAAAGACTGTTTGGTTTGCGGCCGATCGTACAGATATTCACACAATGCTAGGCGACATGAACTCACTGCTCATAGTTTTGACAGATACACTAATAAAATAACACCCAAAAAGACACACATGCAACCTAAACTTCGACCGAATCCATTTAATCCCAAAGCGCGTCTCATGCCCAACCCAATTAGCCACAAAATGCAATTTTTTCCCCGGAACATGCCTGCTAAAGTATTAAATTCTCAAGTATTACTTCCACCAAAACCGATACCTATTAAAGCACCTAAAGTGGCTCAAAACAACTTACCATACCCTCTACGCATTAAGGCCTTGAAAGATTTgcaaataagaaagaaagagcCACATATATTGAAAACTCTTTTGACCTCCAAGCCAGAAGTGTTAGTTTCGGAACCAGAAATTATTAATTCTGGACCCGAGAGTCCTGAAACTCTCATTTCGGAGCCTGAGATAGCATCATTCCAGGTAGAAACTATCCTATCAGAGCCAGATGTCCCAGAATTGTATGGTAATCTGGAAGAAGGCGATGAAGAACATAATAGTCAAAATCACAATTATGATACTGTCGATATGGATTCTGAAAACGAAATCGAAATCGCACGACAACAAACTAATGAATGTGACAATGAAGACCAAAATGAAGTTGCACAAAGTGTTTCTCAAGGAGAAAACAATGCCGAGAGTGTTAAATCTCATAGTGAAAAAGAAAACCAAGAATATGAAACTGTTGATGGTCAGGAGCACATGGAAATAGATGACCAACAGCAAGGTATTAAGAGTGAAAGTGATAAAGGTGAGTCgtataatgaaatgaatgatGAAGGAAACGAGGACAACCCTGATGATAATCAAGATGATGACGACGAGTCGCCTCTGGTGTTAGCACCAGTCGTAGAGATAAATGAAGAtttgcaaaataatatatacaatagtgAAATGAATGAAGAAGCGGTCGCTGGTGGAGAAGTCGAAGGCGAGGGAGGAGACGAAGAACTGGATGAAACTGCAGAAACCAGTGACCCGATTGATGAAGAGGAACCAAAAGACTTGGATCCTGACAAGCTTTATGTGACCAAAACGCAAAGAgattttattgcaaaatatCGAGACATCATTGAACAGATAAACACAAAACGATGCTTGTGTTGCGATCGAGAACATCCGCGCAGGAAGGCTGTTATACAACATTTGCAGAAAAATGGCCACAAAGTACCTAAGCATACGTGTTATAATTGTGTAATCACTTTCGGCCATATTGGAGCTTTGTTGAGTCACATGAGAGCAAATGTCTGCACAGACCTATGGAAgattatatataatgaaaatggaATAACAGATGACTGTGTTGTCGAGAATGAGGTGAAGGATACCAAAGGGCAGTATAAGGACGTGTTGAGTGCTCGGTCTTACGCGTGCAAGTTGTGTCCCGCAAAGTTCCAACTCAAACAATTTATTATGAAACATGTTCTGGATGTTCACGAAGACGGACAGTCTCGGTTCCCGCTTGTTTGTGTCCACTGCCGTTCAAGATTTAAGGATAAAAATTTGCTTAAGAAGCACATACGTAAGGGCGATTGCACAGTTTACATTTCTTGTGACATGTGCAATGATAAGTTTATCAACTTGCAAGATTTTAACGATCATGCTATCTCTGTTCACGCTGGTACATTGGACCAGTCTGACAATCAGAGCAAATGCGTCGATGGCAGACCCACTGACTGTCCAATATGCGGGAAGAAAAACAATAGCTACCCCAACTTGGTGAAACATCTAAGATTTGTTCATAATGAAGAAACTCCTCACTATTGCCAGCATTGTGAAGCCAAATTCGAGCAAGCTGCTGAtcttaataaacatatatatgcTGAGCATTCAGACAGAAGTCTCCAGAGTTATGAACCAGACATGTCGCTGGTGAAAGAAGAAGTTGAAGAGTACCATTATTCATGTACTGAGTGCAACGCCATATTCGAGACAGTTGACgcatggactgaccaccaggtgGCAGAACATAATCAGATCGCGCACCATTGCGACCAATGTGAGAAGAAGTTCTTGAGACCTTCGGAGTTGGCCGAGCACAAAAATACCCATTTACGTGTCAAATTCTATCCTTGTAGTGTGTGCGCTAATTCATATAGCACTCCGCAAAAGCTTTCGGAACACGTACAACAAGCGCATCCCGGAGTAGGCGCTAGCGTCATCGGAGATGCTGAATTTTTCTGCGATATCTGTATCCGCTCGTTTAAAAGCCGACAGGCTTATTCCAACCACATGCGTATACACGCCAAGGTGCCCACAACCAATAAGAAACCCGCAGACTGTAAGAGTTTCGCGCCACAAATTATTGGAAAACCGATCAAACAATTCCCGATGGTGCAACAACCTGGATTTGTTTCGTTCAAGCCCAATCACAACAACGTTCCGAACGCACCGTACTGTTGCGATATTTGTGGCAAAGGTTTCATGCACAAAAAGAATATTTGGAAGCACAAAAAGGTGCTCCATGCTGACATATTAAACGATAGAAACGATAGTGAAGAGAATACAATGCAAGCGTCAACCGAAGAGGACGAATACAACGTGGACGAGAATGGCGTCATGCTCTCGACACCGCAATTCAACAGCTTCAACTTCACTAACTTTATCAACAGTACTCCACAGCCGCAAGCAGAGACTATGTTTTCATGTGAGCTGTGCTACAAAAGATTCCCACTCAAGACGAGCCTGTGGAAACACAAGCGCGCCAAACACGGAATCGTTGCCTCTGACAATGGCGATCCACCAAACGAATCAAGCTCCAGATCCAGCTGTACTATCTGTAAGATATCATTCTCGGACAAGAAATCTTATTACCGACACCGGAAGAATGTTCACAAGTCGTCCATACAAATGTGCAAGATTTGCGGGAAACCCCTGAATTCTACTCTGGAACTGTACGAACACATGAAAGCCGCCCACGCCCGCGAGCTGCTGGGCTACAACTCCAATCAAGGCTCCAGTAAATCACAGGACATAGTCCAAGAAATGGAACCTGAGTATGAAAATGACCAAGAGTCTGCCGACCCGAGTGTGGACTACCAGGCCCGGTATCCGTGCGATGCGTGCGGCAAACAATTCGTCGGATTGCTTGCCCTGCAAAATCACCAGTGTGTCAATCAGCTGTCTTCGACCCCTCAAACGTTCGACTGTGAGATATGCCACAAGAGTTACACGTCCATCGCCGCTCTGAAGAGCCATCGCGGATGGCACCTGAGGTCGCCTGACGGCAAAGCGGCCGCCAACAACAGTGGCCTATGGATGCCGCAGCACAAGGTCACCAACAAGGTGAGCAAATACGAGGTGACTGACACCATCCAGCTCGGGCGGGTGCAACACAACACGTCTACAACTATTGTCAAGAGAAAGATACCTCCGGAAGTCGAGGTCACCGTCGTCAACCCCAACAAGAAGATGCGTTCCGACGACTCCTTGGAGGTGGACCTCAACGCCGGGATGGCCCCCCTCGAGGACAGATACTGCACGATCTGCGACAAAGAGTTCACTAAGCGGGCCGCGTATCAACGGCACATGGACGAGGTGCATCAACCTAACTCGGTGTTCTGCCCCGTGTGCGAGAAGAGCTTCACTCGGAAGTCGACCTTGCTCATTCATATGAAGAAGCACTATGACGGAGGCGAGGGCAGCAGCTCAGGGGCCATGGCCATGATGGGGCAGGCAGACGACGAGTTCTCATGCGATTACTGCGGAATCCAGTTCGACACTGAGCAGGCGTACCTCGCGCACCGCGCCAAGCACCACGCGGAAGAGTCGGGCGGCGAGAGCGAGGACGAAGGCTTGGTGCCGCCGGCGCCCCCGGGCGAGTTCACTTGCGGCCAGTGTGGCGACGGGGTGGCGACGCCGCGCGACCTGATCGCCCACCGCAACATGCACTCCACGCCCACCAAGTTCTACTGTAACATTTGCAAGGTGTATTTCGCGCGCGCCATCGACCTCTCGTCGCACACGCGCGCTCGCCACTCCGACAACGAGAAGCTCTTCTTCCCCTGTGCCATGTGCGACAGATTTTACATGAACAAAAAGAGTTTGCAGAGGCACATTGAATCGTCACACTGA
- Protein Sequence
- MSVNYDRVCRLCLSFRGELLPIFPTTSSEDTESPVLASKIKDCVSIQINENDDLPTNVCKKCMDNVNNWHIFKSVCERTQIKLQSLTNKEGSQLEEVNIKSEFVDEAYDDGVVIDGAYPDNENVESTSKVQSEGPPILASLGLTPKSDKGEDSDKEEGEEEINENEVNEQNYPKIPNIPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKITPKKTHMQPKLRPNPFNPKARLMPNPISHKMQFFPRNMPAKVLNSQVLLPPKPIPIKAPKVAQNNLPYPLRIKALKDLQIRKKEPHILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDVPELYGNLEEGDEEHNSQNHNYDTVDMDSENEIEIARQQTNECDNEDQNEVAQSVSQGENNAESVKSHSEKENQEYETVDGQEHMEIDDQQQGIKSESDKGESYNEMNDEGNEDNPDDNQDDDDESPLVLAPVVEINEDLQNNIYNSEMNEEAVAGGEVEGEGGDEELDETAETSDPIDEEEPKDLDPDKLYVTKTQRDFIAKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRANVCTDLWKIIYNENGITDDCVVENEVKDTKGQYKDVLSARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRFPLVCVHCRSRFKDKNLLKKHIRKGDCTVYISCDMCNDKFINLQDFNDHAISVHAGTLDQSDNQSKCVDGRPTDCPICGKKNNSYPNLVKHLRFVHNEETPHYCQHCEAKFEQAADLNKHIYAEHSDRSLQSYEPDMSLVKEEVEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQQAHPGVGASVIGDAEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNKKPADCKSFAPQIIGKPIKQFPMVQQPGFVSFKPNHNNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEENTMQASTEEDEYNVDENGVMLSTPQFNSFNFTNFINSTPQPQAETMFSCELCYKRFPLKTSLWKHKRAKHGIVASDNGDPPNESSSRSSCTICKISFSDKKSYYRHRKNVHKSSIQMCKICGKPLNSTLELYEHMKAAHARELLGYNSNQGSSKSQDIVQEMEPEYENDQESADPSVDYQARYPCDACGKQFVGLLALQNHQCVNQLSSTPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKYEVTDTIQLGRVQHNTSTTIVKRKIPPEVEVTVVNPNKKMRSDDSLEVDLNAGMAPLEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCEKSFTRKSTLLIHMKKHYDGGEGSSSGAMAMMGQADDEFSCDYCGIQFDTEQAYLAHRAKHHAEESGGESEDEGLVPPAPPGEFTCGQCGDGVATPRDLIAHRNMHSTPTKFYCNICKVYFARAIDLSSHTRARHSDNEKLFFPCAMCDRFYMNKKSLQRHIESSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -