Basic Information

Gene Symbol
rcor2_1
Assembly
GCA_963693495.1
Location
OY856385.1:6433384-6445754[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.5e-10 8.3e-07 29.8 0.0 3 46 132 175 130 175 0.97
2 2 2.8e-10 4.2e-07 30.7 0.0 3 46 403 446 401 446 0.96

Sequence Information

Coding Sequence
ATGGTTTTAGCCGAGAGAAGTAGTGATGTTCGAAATGGGAAGCGTTCAAGGGGGCCAAGCCCCAATGGCCATGGAAGTCCAGATTCCAGCTCCGAAGATGAGAATGTAGTACCGTTTGCAGCTGAGAAAATAAGAGTGGGTCGCGATTATCAAGCAGTTTGTCCAGAATTGGAACCAGTAGAACAAAGGAAGCCTGAACTTATATCTGACAGAGCTCTTCTAGTTTGGTCGCCAACATCTGATATATCTGATGCAAAATtgGATGAATACATAACAACTGCAAAGGAGAAATATGGTTACAATGGTGAACAAGCCCTGGGCATGCTGTTCTGGCATAAACATGACTTAAGTCGCGCTTCATTGGATCTCGCCAATTTCACACCGTTTCCTGATGAGTGGACTGCTGAAGATAAGGTGTTGTTTGAGCAAGCATTTCAGTTTCATGGCAAAAGTTTTCACAGGATACGACAGATGTTGCCAGACAAATCAATAGCGTCTCTGGTAAAATACTATTACTCATGGAAAAAGACAAGAGCTCGGACATCTTTGATGGATGTTGTAAGTGAGGGTCGCAATGCTACAGGATCTGGGACAAATAAAAGGGAATCCGGAGCTGGGTCTGAACCTGGGGGCTCTGATAAGGAGTCAGACACAGATGATAAGAAGTGGACTTTCCACCGGGGAATAGTCCGCGGCGGGGCGTCCGCGGGCGGCGCCGGAGCCGCACCGCGCGCCACCGCCCTCCCGACCGCCCAGGGCGAGAACGGCGGCGAGGGCGCGGGCAAGTGGTGCACCGTGTGCGGCATTCTGTGCACTCAGACCACGGCGCACAATTCCCACAAGTTGTGTCAGGCATGCCTCGTGCACGCCAGACGCACGGGTACGATGAGGCCGCTGTGTGGGCCGTCCGGGAGGCGCGGGGGCGGCGCCAAGCAGCATCGGTACAAGCACCGGTTGCCCCGCGGCATCTACATCAACCATGACGACCTGGTGGCCATGGCGACGGGCCCGCAACCGGGCGAGCCCGCTCCGCCCCACATGCTCAACCGCGGCGACGCCATGCTCGACGCCATGGACAGGGAGATTATATCGCTCAAGCGACAAGTGCAACAAAATAAACAGCAGTTAAGTGCGATGAAACGTAAAGTTGGCGACGGCGGTGTTGACGAACTCCGGCCCGGAGAGCCATCCGCAAAGATTAACTCGCGGTGGACTACTGATGAATTATTGATGGCAGTTACCGCAGTCAGGAAATATGGGCGCGACTTCACCGCGATCGCGGAAACACTGGGCACAAAGACGGAGGCACATGTGCGCGGTTTCTTCGTCTCGTACCGGCGGCGGTACAACCTGGACGCTGTGGTGCGCGAGCACGAGGCCGAGCGCGGCAACGCCCCTCACACGCCACCCTCTGGCGCAACTAAAACAGAATCCGCCGAAATAGTTCCCGAGAACACAAACGCCAACAACAATAGCACCGGATCGCCGCAGGCCACTATGAAAGACGAGAAGCCAGAGGTAGACAGCGAAGGCGTAGCTCTAGGTGCTCCCGGCGAACAGGGCGGAGCGCCCACAACGCCGCCGAAGCCCAAAAACAAGTGA
Protein Sequence
MVLAERSSDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAVCPELEPVEQRKPELISDRALLVWSPTSDISDAKLDEYITTAKEKYGYNGEQALGMLFWHKHDLSRASLDLANFTPFPDEWTAEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVSEGRNATGSGTNKRESGAGSEPGGSDKESDTDDKKWTFHRGIVRGGASAGGAGAAPRATALPTAQGENGGEGAGKWCTVCGILCTQTTAHNSHKLCQACLVHARRTGTMRPLCGPSGRRGGGAKQHRYKHRLPRGIYINHDDLVAMATGPQPGEPAPPHMLNRGDAMLDAMDREIISLKRQVQQNKQQLSAMKRKVGDGGVDELRPGEPSAKINSRWTTDELLMAVTAVRKYGRDFTAIAETLGTKTEAHVRGFFVSYRRRYNLDAVVREHEAERGNAPHTPPSGATKTESAEIVPENTNANNNSTGSPQATMKDEKPEVDSEGVALGAPGEQGGAPTTPPKPKNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00018116;
90% Identity
-
80% Identity
-