Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_963693495.1
Location
OY856393.1:6844051-6846426[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 5.2 7.8e+03 -2.1 0.1 22 33 234 245 230 255 0.82
2 5 1.9e-08 2.9e-05 24.9 0.4 1 45 265 311 265 312 0.86
3 5 2.4e-06 0.0036 18.2 0.1 2 44 319 365 318 367 0.92
4 5 3e-10 4.5e-07 30.7 0.0 1 43 371 413 371 414 0.96
5 5 1.8e-07 0.00027 21.7 0.0 4 45 424 467 422 468 0.90

Sequence Information

Coding Sequence
ATGGAGTCTTTAGCAGATGCTATGGATGTGTCCAGTAACAGTGACACCGAAGATGTTCTGCAGGATTTAGAACAAATAAATGCTGTACTTGAAGAAGAACAAACTTGTAATACGATCTCTCAAAGGGAATGGGCATCGGCGAACAACTCTTCTATATGTCATTCTTTTACTACTTCAACTGATAAAAGGCAGGTAACTAAAATTGACGAAGctctgttattaaataaattaatggatGAAAAATATCAAAAGTTGGAGATATTATTAACTGCTCGATTAGCGGAATGCGAAGCAAAATTGAAAGAGCTTGGAACCACGGATGTACCTCAGGAAAGGGACACAAGTCATTTTCGCTATTATCAATGTGGTAGACCctattttaaagataaatataatttttccgCACCAGCCAATGAAGACACAATTCTGATGCAAAAGTCACAAATGTTTGACTTTACTTCTCTTGTGACTGTACCTGGCTGGACTGTTAACGATAAAACCATGTTTACTAATGTTATGCTTCAAATGTCCCAAGAAATCAAGGTCAGAGAATTGCTCAGCAAAATATCTCAATTAAAAAGAGAAAGCAACAGAACCGGCAAATGTAAAGACAGGGAAATTAACCATCTTAGTTTGCAAATAATAGAAGTAAAGACTAAATCTTTGGAAGAAGTTGCAATGCCCCTGAATTGGGAATATGATTGGGATGCTCTTGCGAATAAACTAAATCACAGGCATGTAACACAAGAATACAGATCTTTCTGGAAGTTATTTTTCCACCCGAGTATTAACAAACGCCCATGGAGTAAATCTGAGCACAAAAAACTTCAAGAAATTGCATGCGCAAAAAACCATGAAGATTGGGATAATATTGCCAAAACATTGAATACAAGAAGAACAGGCTATCAGTGCTTTGTATATTTCCGTACAAATATGTCAACAACTAACAATGGCAAAAAATGGCCTAAAGAGGAAgtggaatatttaaaaagactGATTGATTATTATAGAGATGATGACTTCATACCGTGGACAAGGGTTGCCAGCTCTATGGAGAATCGTACCAAAATGCAAatctacaataaatatattaggctACAAGAGAAAAGAAAAGGCAGATTCTTGCGTGAAGAAGATGCAGTTATATTAAATTGCTACAAAAAATTTGGGAATAACTTAAAGAAAATCTGTGAATTCTTGCCAGGTCGGTCTACAGCCCAAGTCAGAGTTAGACTAAATATTCTGACCAAAAATAGTGTATCTGTTATTTGGACACTTGAAGAAGAtagaaaactgttacagttgaTGTCTAATGAAGATTCTGTATCATTTTATTCTAATGTCACAAAACATTTCCCTGGTAAGTCTAGAGAGCATGTTAGGTCAAGGTGCTTGACATTAGTTAGCTGGATGAGGAAATATCCTCTTTGGGATTTAAAGTATGCCCCTAGACGTGCATCGCGTCGCTTGGCACATGGAGGCCCCAATGACAATCTAAAAAAGGCGGTAGAAAATCTAGAAGAAAGAATAAAATCAGAAGTTGTTACTAAAAAGTCTGGTAAACTCACTATTAACTCATCAGAAAAAGATATAGAAGATGCTATAACAGCAGTTCTTATGACAGAAATATGCCAAGAAGAGCAAAGTACTGGATTACAACAAGATAATACTGATGAACCAAATTGTTCAATGCCCTCGGGGAACTCTGTTAATAACATTGATATGGACTTACACAATGTTTTAGTAGTTTTAAATGCTCAGTTGAATCTGGATCGGTTTAAAGAAAGTgtttatgttaaacaacatcCTTATTTGATGAAAGAAAAGCTTTATACatctgaaaaattaaattgtttgatAAAAGTGAAGTCTTACTCAAAAAAGGAAACTGgtaaaacagaaataaaaaatcaaccaGATATATGGGGAAATAATTATCTTGGACCATTATCTCATGTGCTGCCACCACATTATGCTACAATTACTGGCTGTAAAGCTCTAATGTCTGTAATTAGTTCTACAAATGATGCTGAAGGTAGTTTAAGTGTATGGATGAGACGTAATTTAACTTTTAAGAATCAGATGTTGCTGCTAATGGATAGGTTTTTCACCTTATTTACATGGCCTATGATGTTGTCTAATGTAGACCCTAGTTGTAAACAAACTCTGACAGCTTTTGAAACAGCATCTCAAAATAGAGGTCATAAACGAACAGGACCTGAATCAAGTGGTACAGGTGTTGCTATACCACCAGTACCGAAAAGGTTTTTATCAGTACAGCCTAATTTAGATTTAGATCTCACAGACACTATAGATCTTGTTGAAGAAGATGACAAGGATAATGTAACAGTTAAGCAAGATTTTACATCATTGTAG
Protein Sequence
MESLADAMDVSSNSDTEDVLQDLEQINAVLEEEQTCNTISQREWASANNSSICHSFTTSTDKRQVTKIDEALLLNKLMDEKYQKLEILLTARLAECEAKLKELGTTDVPQERDTSHFRYYQCGRPYFKDKYNFSAPANEDTILMQKSQMFDFTSLVTVPGWTVNDKTMFTNVMLQMSQEIKVRELLSKISQLKRESNRTGKCKDREINHLSLQIIEVKTKSLEEVAMPLNWEYDWDALANKLNHRHVTQEYRSFWKLFFHPSINKRPWSKSEHKKLQEIACAKNHEDWDNIAKTLNTRRTGYQCFVYFRTNMSTTNNGKKWPKEEVEYLKRLIDYYRDDDFIPWTRVASSMENRTKMQIYNKYIRLQEKRKGRFLREEDAVILNCYKKFGNNLKKICEFLPGRSTAQVRVRLNILTKNSVSVIWTLEEDRKLLQLMSNEDSVSFYSNVTKHFPGKSREHVRSRCLTLVSWMRKYPLWDLKYAPRRASRRLAHGGPNDNLKKAVENLEERIKSEVVTKKSGKLTINSSEKDIEDAITAVLMTEICQEEQSTGLQQDNTDEPNCSMPSGNSVNNIDMDLHNVLVVLNAQLNLDRFKESVYVKQHPYLMKEKLYTSEKLNCLIKVKSYSKKETGKTEIKNQPDIWGNNYLGPLSHVLPPHYATITGCKALMSVISSTNDAEGSLSVWMRRNLTFKNQMLLLMDRFFTLFTWPMMLSNVDPSCKQTLTAFETASQNRGHKRTGPESSGTGVAIPPVPKRFLSVQPNLDLDLTDTIDLVEEDDKDNVTVKQDFTSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-