Mneu028192.1
Basic Information
- Insect
- Malacosoma neustria
- Gene Symbol
- -
- Assembly
- GCA_963693495.1
- Location
- OY856401.1:2948866-2956985[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.081 1.2e+02 3.3 0.0 1 29 98 126 98 135 0.92 2 2 5.5e-08 8.2e-05 23.0 0.0 1 34 161 194 161 199 0.92
Sequence Information
- Coding Sequence
- ATGGGCACTATTGATAGCTTAAGTTTGCTTACTTCCAAAATTAGAACTGCTTTCTCGCGTAATGAACATGTACTGGGTGTCTTTTTAGACATTTCCTCCGCCTATGACAGTGTCAACCTCTCCATACTCAGGGACAAAATGCTCCAGCTGAGTATTCCAGAGAAGATTGTCCAAGTTATTTGCAACATGTTTAGCGAACGTTCGATTGTAGTCCGTTTCTGTGATGAAAAACTGCAAAAGAATAAATTATCTAATAAAGAAAAAGAGGGCGTCAGACCAAGGAAACGATACACCGAAGAGGATATACGCAACTGCTTGGAAGCAATCAGGAACGAATCCATAGCGCCCTCACTGGCTTCAGTGATATACCATGTGCcgatgaaaattataaataaaatgctcGAGACGAAcgATCTACCGAAGCGTCAATGGCCGAAGAAGCTCCCGAAAACGGAGCGCAACAGGAGGAACAAACAGTACACGGAGGATGACTTCCGGACGTGCCTGGAAGCTGTCCGCAACGGCACCATGTCGCCCGCTTCCGCTTCCGTCTACTACAATGTTCCCAAGAAGACTATCATCAACAAGATGAACTCTGATGATGTCATCGATGAAAAGAAAGAGTTAATATACCAATTCCACAAGGAAATCAAATCTATATTGAGCTTTACCAATGGTACACCATTCAGGAGTAATGTGGCCAGGTTCAGCTGCATATACTGCCTCGAAGCTGTCTTCACAGACCCAGAGGAGCTGAGGAACCACACCAGGACTGTCCATATTGATGAGAGGACTAAGAAGGTTGACATCTTCATGAGACCTCATTACGAGAATGAGATCTTGAAGTTGGACATCCATAATTTGTTTTGTGTCGTCTGCTCCACTATGGTGCCAGAGTGGAATGACATGCTTCGGCACCTAGAGGAAGCCCACAAGCTCAGTCTGGGTCAGGTGTACTCAAAGGTGGTACCATATGTTCTTGAAAGCGAGCTCAACTGCGCACTCTGCAAAGCGCCTTTCTCAAACTTCATCACGCTAGACGGACATATGAACTATCATTATGAGAACTATATATGCTCTGACTGTGGAGATACCTTCCTAACTCAGGCGAGGTTGAAGGCTCATCAGAAGACCCACGAGGCTGGTCGGCATCCCTGCGAGGTGTGCGGAAAAGTCTTCCAGCTGGAGAGAAACAAACGGAAGCATATAAGGATGGTGCATCTGCAGAATTTGAAGTTTAAGTGTGCGTTCTGCGATGACGTGTTCACTTCGGAAGTAGGCAGGCAGAAGCACCTGGAGAAGGAGCACGCTGATAAAATGAAGTCCTATCACTGTGACGAGTGTGGCAAGGTCTTCCACTGGCGACAGTATTATGTCTCGCATAAGAAGAAGGCCCACGGGGAGAAGATATACGTGTGCGTGTTGTGTGGGAAGAGGTATTCGAGGAATTACCAGCTCCAGGAGCACATGGCCAGTCACTCGAAGGAGAAGAGTGTGGAGTGTCCCGTATGCCACAAGATGTATACAACGAAGACCTCGATGAGGATGCACTTATCAAATCAGCATAGGAAAAAGGGGAACACTGGTTCCAGTTGA
- Protein Sequence
- MGTIDSLSLLTSKIRTAFSRNEHVLGVFLDISSAYDSVNLSILRDKMLQLSIPEKIVQVICNMFSERSIVVRFCDEKLQKNKLSNKEKEGVRPRKRYTEEDIRNCLEAIRNESIAPSLASVIYHVPMKIINKMLETNDLPKRQWPKKLPKTERNRRNKQYTEDDFRTCLEAVRNGTMSPASASVYYNVPKKTIINKMNSDDVIDEKKELIYQFHKEIKSILSFTNGTPFRSNVARFSCIYCLEAVFTDPEELRNHTRTVHIDERTKKVDIFMRPHYENEILKLDIHNLFCVVCSTMVPEWNDMLRHLEEAHKLSLGQVYSKVVPYVLESELNCALCKAPFSNFITLDGHMNYHYENYICSDCGDTFLTQARLKAHQKTHEAGRHPCEVCGKVFQLERNKRKHIRMVHLQNLKFKCAFCDDVFTSEVGRQKHLEKEHADKMKSYHCDECGKVFHWRQYYVSHKKKAHGEKIYVCVLCGKRYSRNYQLQEHMASHSKEKSVECPVCHKMYTTKTSMRMHLSNQHRKKGNTGSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00948255;
- 90% Identity
- iTF_00948255;
- 80% Identity
- iTF_00948255;