Mneu012161.1
Basic Information
- Insect
- Malacosoma neustria
- Gene Symbol
- -
- Assembly
- GCA_963693495.1
- Location
- OY856381.1:851984-862917[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.9e-11 4.3e-08 33.5 0.0 4 39 146 182 143 186 0.89 2 4 1.7e-12 2.6e-09 37.4 0.5 2 39 198 235 197 238 0.93 3 4 6.4e-16 9.6e-13 48.4 0.0 2 45 253 297 252 297 0.96 4 4 7.4e-18 1.1e-14 54.6 0.1 2 43 305 347 304 348 0.95
Sequence Information
- Coding Sequence
- atgcaGCTTCCATCAATAGAACTCCGTCCAGTTAAGATAGAACGCGATATTCTCGATGAAAATGTGGCTGTTTCCACGCAGCTTCTGGACCTGGAACACCTGCAGGGCAGTGGTCTCGAGGAGTTGGCGCCCCTCGCCCCATCCGCCACTCCCGTCTGCGTCAAGCAGGAGCCTGTCTGCTCCCCTCCAGCCTTCATTCTTGAGACCCTCGAGTCTGCTTCTCGAACAACGGGAAGCAGTAGTAATGATATTCACATGACAACCCTTGGCTCTGAGGTGCCAGATTCCACAGATTTCGCGCCATTCATGACAGTCAAGGATGAACCGCTTTCCGAAGGAGAGCAGCATCACCTCAGTGGAGACGATACAAGTGATTCCTGTAGCACTTACGCCGAGTTCTCCATCAGATCAAGCCCAAAAAGCTGGACTCAGAAGGATATGGAGAATGCCTTGGAAGCGTTAAGAAATCACGATATGAGTTTGACTAAGGCGTCGGCTCGGTTCGGCATCCCATCAACGACCCTGTGGCAGCGGGCGCACAAGCTGGGCATCGACACGCCCAAGAAGGAGGGCGGCACCAAGGCGTGGGCCGAGGCCGACCTCAGGGCAGCCTTGCACGCTCTCAGGGCAGGAGCCCTCTCCGCCAATAAAGCCAGCAAGGCTTATGGGATCCCAAGCAGCACACTGTACAAGATAGCTCGCCGCGAAGGCATCCGGCTGGCGGCGCCGTTCAATGCGGCGCCCACGGCGTGGCGCAGGGCGGACCTGCAGCTGGCACTCGCGTCCATTCGTCAGGGAGCCTGCTCCGTGCAGAGGGCCGCCTCCCAGTACGGCATCCCCACAGGCACACTGTACGGACGTTGCAAAAGGGAAGGTATCGAGCTGTCCCGCACGACCCCCACGCCATGGTCGGAAGGTGCCATGGAAGAGGCTCTTGAGGCCGTCAGGATTGGTCAGATGTCGATAAATCAGGCCGCCATCCACTACAACCTGCCCTACTCTTCCCTCTACGGCAGATTCAAAAGATGCAAATACCAAGCTCCTGTCATACCAAACCAAACAGAACACCAAATAGACCACCAAAAACAAGAAGTACACAACTACCCTCCACAGGATATTTCCTATCTTCAAGTTCCGCAACAATTGCCGCGGGAATATCCCCAGCACATATTGCCGGATATACCCCAAGATTATCGTACGATGTACTACAGTCAGTGCAACAGTATAGCGACCAGTTGA
- Protein Sequence
- MQLPSIELRPVKIERDILDENVAVSTQLLDLEHLQGSGLEELAPLAPSATPVCVKQEPVCSPPAFILETLESASRTTGSSSNDIHMTTLGSEVPDSTDFAPFMTVKDEPLSEGEQHHLSGDDTSDSCSTYAEFSIRSSPKSWTQKDMENALEALRNHDMSLTKASARFGIPSTTLWQRAHKLGIDTPKKEGGTKAWAEADLRAALHALRAGALSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQLALASIRQGACSVQRAASQYGIPTGTLYGRCKREGIELSRTTPTPWSEGAMEEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYQAPVIPNQTEHQIDHQKQEVHNYPPQDISYLQVPQQLPREYPQHILPDIPQDYRTMYYSQCNSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -