Basic Information

Gene Symbol
JMJ19
Assembly
GCA_963693495.1
Location
OY856371.1:25842767-25856390[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-15 4.4e-12 47.0 0.0 20 88 407 472 391 473 0.86

Sequence Information

Coding Sequence
ATGtcatgtggggaatttgagcgtattCACAATGAACTTGGGTATGGTGGCCCCAACGCGGAAGAGGAGGCCATCCTCAATGCATACCAGGCAGTGTTACCCACTGGAATCAATTTGATTTCAGCTAGCGACGACCGACACCTACAATCAGCAGCGTCTTTGGAACTGTCAGATGATGATGTCTCAAGTACCTCAGCCCCACCTAATAAACGTTTGAAGAAGACCCACTCAACCGAAAAGCAATTTTCtaATACAGATGAAGTGGAAGATACTGTTATCACTCTGTCAAGAAGTTCCGAAGAAAATGGTCGAGCTAATGTCGACCAAGAAGCACAGGATGCCCCCATGGAAGATAATGGCCGGGGAAATCTTGTTGAAGGAGAGATTGAAGTGCTATCTGGCTCTAAGAGTATAATTTTCGTATTCACCGATATACACATGCAAAGAATAAAAGAATACCAAGCGCGAAAAACGAACACTAACTACGAAGTTAGCCAAGATGGCGCCGGCCCCTCCAGAAGTGCCGATCGTACTGGAAACTACTACATAGATCTATCGCAAATGCTCACAGAAGTGCTCGAAATATCAAAAGCCCATAGCACCGGCCAACTGCAGGCCAAGATGGTACCCAGAATTAAAGAGAAAGCAATTGATGACTTCTCATGGATTCAAAGTGAAAATTTGCTAGATCAAATTATAACTGCTATCAGAGCGAGTGAGTACCGTAATCCGGTGATAGATATCCCTGTCTCGTCTGGCCCCAGAGTGGGACCACACACTCCTCCCAATATCAGTAGCCTGGTTAAAGGATTTGAATTCTCTGAATTTATCACGAAAGAGCTTGAAGCGTTTCAAAATGAGCTGAGCAGCATATTTCATAAAGTTGATGATCGAGACAACACTGCCAGTTCTCAAGACTTCAGAATCCAGTCGCCAATATTACAAGAAACAAATAAGATCGTAGATTGCCCAATATTCTACCCGGATACTTACCAATTTCATAATCCAATAACATACATCAAAAGTATAGCCGACAAGGCAGAACGGTTTGGTTTGTGTAAAGTGGTAGCTCCGAATTGCTTCCGACCTATGTGCGTCATAAATGAAGACACCCGTTTCCGCGTGATGAACCAACACGTGGAGCGAATGTTCCACCGTTGGGGGCCTGCCGTGCAAGAGTTGTGCATCATCAAGGCCAACCTGGCGAAGCAGTTCAAAGTCGTCCGTACACCCCAGCTCAACGGCGTAGAAGTGAACCTTCTAAAACTGCACGACGCAGTTCGACTCCTCGGCGGGTTAGGAGAGGTTGTGAGGAATAATGGGTGGGACTCCATCGCCGAACAAATAGGCATACCAAAAAGCCCAAATTCAAGTGCAAAACTTgaacaaatatattgtaaattcaTTTTGGCCCATGAAACACTTTCTCCGGgtgAAAAGTCCACGTTGgcaaaaaaagtagccgatgctTGGGAAAGGAAAAAAGCAAAACTCGCAAAGAAGTCATCAAATCCACATCATTGGGAAAGAAAAATTCTAGGTCTCCTTGATTCGCCAGAGAGAGACTCTGAAGACAAATGTGTGGGCAAAGCGTTGGCTGGAATAGAGGAGTGCGTGGTGCCTGGTCCCCTCATGCAACTTCCTACATACAAAAAGGTGGCGaagaattatttacaattttacttCCCGAATGCGGAGGATGCCACCACGAAGCAAATCGAATCCAAATTCTGGGACCTGGTTTCGAAGAGAACGGAGCTGGTGTGCGTGAATGCGGCAACCATAGACACCGGGGAACATGAGTGTGGCTTCTCGACTTACATTCACGATTTTAGTAGCACCGGCTGGTCTTGGAATTTGAAGGCGGTCGGCAATAACATGATGAATGTACTCCGTCCAGTGCACCCATTACCAGGGGTGACAAGACCCACTCTCCATCTGGGCATGGTGTTCGCCTCGAATGGCTGGCATGGAGATAACTATGGCCTCCATGAGTTGGATTATATGCACCAGGGATCGACCAAAGTGTGGATTCAAAAGAAGCCTATGTCAGTCCTGAAAATCTATGATCAAAGTTTGGAAACAGAACTACACACCGACGCTAGCGCTGAGGGTTACGGTGCAGTCCTTTTACAAAAAAGCCCGAAAGATAATCAGATGCATCCAGTATACTACATGAGTAAAAAGACGACACCCGCTGAAAAGAAGTTTAGAGTCTACTTACTTGGTATAAAGTTTAAGATTGTGACTGACTGCTCAGCCTTGACGATGACTCTTCATAAAAGAGACTTACCGCCACGCGTTGCTCGATGGGTATTATTACTAAAAGAAAATGATTATGTTATTGAGCACCGACCTGGAACACGACTAAAACACGCTGACGCTTTGAGTAGACAACCAATAAACAATGTTTGCATACTTACTGACACATCTGCACGCCTTAAGAAAGCACAAGATGAAGATCTCTGA
Protein Sequence
MSCGEFERIHNELGYGGPNAEEEAILNAYQAVLPTGINLISASDDRHLQSAASLELSDDDVSSTSAPPNKRLKKTHSTEKQFSNTDEVEDTVITLSRSSEENGRANVDQEAQDAPMEDNGRGNLVEGEIEVLSGSKSIIFVFTDIHMQRIKEYQARKTNTNYEVSQDGAGPSRSADRTGNYYIDLSQMLTEVLEISKAHSTGQLQAKMVPRIKEKAIDDFSWIQSENLLDQIITAIRASEYRNPVIDIPVSSGPRVGPHTPPNISSLVKGFEFSEFITKELEAFQNELSSIFHKVDDRDNTASSQDFRIQSPILQETNKIVDCPIFYPDTYQFHNPITYIKSIADKAERFGLCKVVAPNCFRPMCVINEDTRFRVMNQHVERMFHRWGPAVQELCIIKANLAKQFKVVRTPQLNGVEVNLLKLHDAVRLLGGLGEVVRNNGWDSIAEQIGIPKSPNSSAKLEQIYCKFILAHETLSPGEKSTLAKKVADAWERKKAKLAKKSSNPHHWERKILGLLDSPERDSEDKCVGKALAGIEECVVPGPLMQLPTYKKVAKNYLQFYFPNAEDATTKQIESKFWDLVSKRTELVCVNAATIDTGEHECGFSTYIHDFSSTGWSWNLKAVGNNMMNVLRPVHPLPGVTRPTLHLGMVFASNGWHGDNYGLHELDYMHQGSTKVWIQKKPMSVLKIYDQSLETELHTDASAEGYGAVLLQKSPKDNQMHPVYYMSKKTTPAEKKFRVYLLGIKFKIVTDCSALTMTLHKRDLPPRVARWVLLLKENDYVIEHRPGTRLKHADALSRQPINNVCILTDTSARLKKAQDEDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-