Msep169372.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Magicicada septendecula
Gene Symbol
-
Assembly
GCA_034769895.1
Location
CM068371.1:284712471-284758270[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.054 71 8.1 2.8 2 21 514 533 513 534 0.94
2 15 5.3 7e+03 1.8 1.4 1 23 663 685 663 685 0.79
3 15 0.067 89 7.8 1.4 1 23 913 935 913 935 0.97
4 15 0.0069 9.2 10.9 0.1 2 23 944 965 943 965 0.96
5 15 0.0092 12 10.5 2.3 1 23 996 1018 996 1018 0.96
6 15 0.029 39 8.9 5.7 1 23 1025 1047 1025 1047 0.98
7 15 0.19 2.5e+02 6.4 2.2 1 23 1101 1123 1101 1123 0.98
8 15 0.026 35 9.1 2.3 1 23 1141 1163 1141 1163 0.96
9 15 0.66 8.7e+02 4.7 2.3 1 23 1245 1267 1245 1267 0.95
10 15 0.0072 9.6 10.8 1.3 1 23 1273 1295 1273 1295 0.98
11 15 0.0037 4.9 11.8 0.3 1 23 1372 1394 1372 1394 0.96
12 15 0.01 14 10.4 0.7 1 23 1400 1422 1400 1422 0.96
13 15 0.0048 6.4 11.4 2.6 1 23 1506 1528 1506 1528 0.97
14 15 0.00087 1.2 13.7 1.7 1 23 1534 1556 1534 1556 0.99
15 15 0.054 72 8.1 4.8 1 23 1664 1686 1664 1686 0.96

Sequence Information

Coding Sequence
ATGAAAGATGTGAAACGCGTGATCTACAGCCGGTGGAGGGCTCACGAAAAAAGTAGTGATCCCTCGTATCTAAGTAACGGTGTGAAAGAAGAATTGTGTCTGGAGCAGAAGCTGGCCATTGAACGAACTACCATTGTTTTTTCTTTCCAGTGTGATATCGAAGCATCATCCTCCATCCACAGTGTCAGAAGAGTTCTTCCTGAGAGTACTGTCGTAAAAAGTCACCTGTTAAGCTCTGAAATTCATCTAGAGTCGTCTCGTGGCATAGACTCTATACATCATTGGAATGAAAGCGTTAAGCGCAATATAGGTCAGGTCGGCCTGACATATGTTACTGCTCGTAACAGGACACGATGGAATGGAGAACCCGGGCTTATTTGGAAACGTGTAACACGAATCGTGTTAGACGTACTGAGTATTGGGCGCCATCTGGAAGGATGGTGGCGACTGTTCGTTAGTGCGTACGTGACGGGTGCCAAAAGGCGACAGACAACGCTTATTCGAATTCATCTCAATCGACTAGCAGATTTAAGTAGCCTTAGAAGGCTCGAAGAGTTGGAGGTAACGCCTAAACCACCTCTTCAGTCACAGACATCTTCACAGCAGCCATTCCAACCACTGCATCAGTCAAAAAATATAATGATGAAAAAGCCAAAAACAGTAGCACATTTTAATGCCAAAGAGTTAACAGTAAAACTAGGTGAGAAGGTAGTAAAGCCTGGTGACGTGTTGCAACATAAGAATGGTACAGTTTATGTGAAGAAAATAAAATGCCGGGTTTGCAATTATCGAGCAGCTTGGGAAAGTGAGATGGTTAGACATGAATTACGTGTACATGGGTTAGAGGAGAAGAAAAAGGCCCCAAGGCCTATACCAAACTTGATTCCAATTCAGTCTTCAGGGGGAAGTGGAACACCAGGAGGTACTAACACATCAGGACCACCAGTAGCATCAGGAGGTGGAAATAGTGGTGGTGGAGGTGGTGTTAGCAGTAGTGGTGGAGGCGCAAATACTGGAGGCAGCACTACCAGTAAACCTCCACCACCACCGATTTTGAAAATCCCAAATCTTGTCAAAGGCCGTAGTGCTCATACTACTCCTGAAAAGGCAATGTCCGAAAAAGATTTGAATGATATTTGTGCTAAATCATGTCCAAATAGTTCTTTAAAAGATTTTGCCTCTCTGATTGGTGATGAGGAAGCCTTCAAAAATTCGCATGATTCTGTTCCATTACCGATTGGAAGTAAATCTGCATTTCCAGATAAAAACAGATTAAGTTCTCCAGAACACTCATTAGAGACTAAAAGCCTTCCAGATGGGTTTAAAAAGAAGAATGCATcattttttgataaattaaaagaaaagttaatGACAGGTGCTGGTGAAAGTTGCAATCTTGTATGTAATTGGTGTGGTCATGAATCAAAATGTTTGTCAGAATCCGTTAGACATAAGAAACTGCATGAAACGAAACCTGCAGGAAGTGCTAGTCCTTCTAGCGGTAACTCTGTAATTAGTGGAGCAGAATTATCATCAACTAGGTGCCAGCATTGTCGTCAGAGATGTAAAACTAGTGCTGATTTAGTAGTTCACCTGAAGTCTTGTGTGGAAGCTATGAAGAAAACAGAACATGCTGATGATGAGgatgaagaggaagaggaagaagatgaTAAAATTATGGATGTGGATGAAAACAGAGAAGAAATAAAATCTGAAGATGGTTTAGAAGAAAATGGTGATGGGCAAAAGCCACCTCATCCAATGGAAAATAAGGTGTTTGTATGGACCAATATGGGAAGCAATGATGACGACAGTCGCAGTAAATCTCCACAAAGTGATGAATGCAGTGTTGTGGGAATTGAAACAGCGCCTGGTATTGGGGCAGTAACAAGCAAATCAAAGGCTGCGTCTCATGGCAATTTGACTGGCAATATACTTGGTCAGAAAGTGATGAAAATGAAAGGAGACCATTCTGTTaaaaagGTATACAAGTGCCCTCATTGCTCTTTCTGGGCTTCGACTGCTTCACGGTTCCATGTACACATTGTTGGCCATTTAAATAAGAAACCATTTGAATGTTCACTGTGTGCATACCGATCTAACTGGCGCTGGGACATTACCAAACATATTAGGTTGAAAACGGTTAGAGACTCTAGCCATGAGCGGGCTAGGGTGTTAATGACTGATGAAACTGGCAGGAGAAATTACTCAAAGTATAACAAATACTTGACTTTAATGAAGGTTCATGAGCCATCAGCAGAAAGTAGTGGATCTGGAAGAAGAACAAAGCCGGTGACTCAGTCATATGGACCAATTGAACCAGTACCTATTTTACCAGCACCTCCTAAGTTGACACCAGCTCCAGCATTGCATCCTTCCAATCCGAGCAGTAACCTTCAGATGCAGAGTTCAActccaccaccaccacctccaTTGTCACAGCATCGCCCTATTTATCCAAAGCCACCGCCTCTTCATTCATCATATGATTTGAAGCGGCCAATGCAAGACAGTCGTGATGATAACATaccaaagaagaaattaaatgttGAAAATAAGAAGACCATGTGGAAATGCAAAAAGTGTTTGTTCAGAGACAGTGATCGTTCAGTAGTACTTGCACATGTAAAAGAACATTATCGTAATCAGTGTCAAGGGGGAAGTGATGCAGAGAATCGAGGACTAGGTGGTGGATCTAGACCAGAAAGGAATGAAGATGAGGCAAGCAGTGGTGAATTTATGTGTGAGACGTGTCCATTTGTGTGCGACACCCAACAAGCATTTGACCAACACATGGAATACCACTTTGAAAGACCAGAAGCCACTTTGAGATGTTATGTTTGTCCATATTTTGTCAGTGATAAAATGGAATTAAAAGAACACATGATTCTTCATAGAGATTCAGATGGTGAAGAAGGAGCAAACCACAGCATAAATACATCAGGACAGTCAGTTCAGaATGGAGATGCATTTGCAAACAAGAGATACAAGTGTAGCATCTGTCCTTATGTGTCTAACAGCAAAAGCCAGTTTCTGTACCATAAACAGTTTCACCGACCTCGTGGAGCTCCATTCAGATGTAACTTATGTTCATACAATGTTACCCGCAGACACTTGCTACATCAGCATTTAAGACTTCACGGTATTAATATACCTATTCAAAAGACCAAGGATTGTGGATATGAAGAATTTGAAGAAGGTGGTTCAGAGCCTCCAGTGGATATTCCCACTATTGATACGAGTAATCTACCAGAAATTCCTTTAGTTTGGGTTTCAAAGTTGGGCAACCTGACAAAAATGTTCAAGTGCCGTTATTGTCCACATGTTAACATTCGTAAGTCAAATATTCAAGAACATGAAAAGATGCATAGTTCACGTGTGAAACCAAATTCAGATGGCACATCACCAAATCCTCAACAGCACCATTGTCCTGACTGTAACTATGTCTGTAACAATGCTGGTGTATTATCTTCACATGCCAAAGTACATCAAGGACTTTTTGGACAAGTGTGTAGTCTGGTTGACTTAAATCGTAGTGATGAGGCCCAGATTAGAGAACTGAATGCACTTTTAGGCAGAGAAGAAGAAGGTCCACCTGAAATATTACCACATGAAATCAACAAAGAGTTTAAAGATAATACATCTccacctccaccaccaccatcTCTGCCTCCACCTAGTATCAAAATTGAGAAAGATATGGATATACCAAATTCTGATGGCAAAGTTTTGCATTTTTGTTCAACATGTCCAGCCAGATTTCTCTATCAGAAGGAGCTGGAGATACATACAAGGTTTCACAGTCTTCAGTTACAGTTTCAGTGTGAATCATGTTCATATACAGCAAGACAGCAGCCACATCTTCTTGCACATTATAAAGTTCATACAGATGAGTATCAGGATAGGACAAGCTCATTGTGTGAAGTATATCCAGTATCTGGTCAGCATCCAAAACCAAAAATTGCTATTATTGTAGATGGATCTGAAGAAGTAGGGCCAGCTTGGGTAGTAGTTCCACCCCAAAGGACAGGTAGTAAGGAGGAAACAGAATATGATCTTGATGAGCGATCAGGTGATGTTGTTCAGCATGGTACCCGTATAGTACAGAAACAATTTGCTTGTGACAAATGCCCAGCCACATTCTTCAAATCTGTTGCTTTACAGTATCATATGACTCTGCATGGTGGAAGTGGTCCTCACAAGTGCCGAAGTTGTGACTATGCTGTTAAAACATATGGAAATCTAATTAAGCATGAAGCTGTTCATGGAAAACTAGAACCTAGAGCTAAAATTAAGGTGAAACCTAAAAAACCAGTAGATTATGTACCAACATCAGGGACAGATTTGTTCCGTCATAAAACAGAAGCTGCTCAGAAAGTTGCTAACACACCGCCTGCACCTCCTCCACCACCTCCACCACTTCATATTGATCCAGAGTTTGGTGTTCTGATGCATGGGAGTCCTGAATTTATTTACCCCACTTATCTTAAAAATGGAAAAATGAAAGAAAAACGTTATAAATGCCATAAATGTCCATCAGCATTTGAAAAAAGGGAGCAGTACAAAGTACATCTATCCCTCCATGGGTCAAAACAAAGATACAGATGTGAAAGGTGTGACTATTCAGTTAAATATTATGCCAATTACATTCAGCACTTGAGGAAACATCAACACAATGATGCAACAAAAGCAGAAAGAAAGATGTCTTCAGATAAAAGTGTTGATGAATCTGGAAATGATGATGTTTCAGAACATAATGATACACCAAGTGAGGAAGTGACTACTCCAGTAGTCAGTCGAAGTGCAAAGAAAATGCAGCTGTCAATGGCAGATCAACAGACTATAATGTTAATGCAACAAAGAGTTGTTAGTAATTCTGTTAGTACTCCAGAGGTACTTAATAGATGTCCATACTGTCCATATAGTAACCAGAGAAAAGATGGTGTCGGTAGTCATGTGAAGTGTCATTCTAATGCAAAAGGTGGAGCTTTCATGTGCAAGCACTGTGACTACACTGTGCCACAGCAACACTTCTTGCGTGAACACAACAAATTACATTTTTCACCGTTAAAGGGAATGAGACCAGAAGCATATATGAAGTGTGACAGACTAGAATTGTGGTCTGAACCTGTTGAACAGACTGGTGATAATGCAAAGaaagttttaatatttaaagatAAAGGTAATACAGTAAAAACAGATAGATTTCTACCAGAAATATCTGTAGCTGTTGTGAATGGAGACACTGAGATTGGTGAAAAAACTTTTATTAATCTGAAAACTGGTGAAATGGAAGTGAGTGATGACAGTGTAGAAAATATTGAAAAGGACGAAGATAAGGAAAATCAAGAGATGAAAATTGTGTGCAAACCAGAAGAAAATAGTGAAGATATAAACAATGAGGAGGAAAATGCTAGTGAAGTTCCAGTTAAAACAGAAAGTGTAACAAGTGAAAGTGATGAAGCTGAAGAACCAGTTGTTAATGGTgacatatatattgtaaataatggAGAAGAAGAGGATGAGTGTGGAAGTGATGAtgataaaaaagaagaaaaaattagCGAAGAAGATAATGACCAAACAAGTATTTTAATTACTGGAAGTGATAGTGAAGACAGTAGTTCAGATTCTTCTAGTTCAACAGATGATTCCGAACAAGATTCCACTTCTAGTTCAATGACCTCAACGCACCAAGACTGA
Protein Sequence
MKDVKRVIYSRWRAHEKSSDPSYLSNGVKEELCLEQKLAIERTTIVFSFQCDIEASSSIHSVRRVLPESTVVKSHLLSSEIHLESSRGIDSIHHWNESVKRNIGQVGLTYVTARNRTRWNGEPGLIWKRVTRIVLDVLSIGRHLEGWWRLFVSAYVTGAKRRQTTLIRIHLNRLADLSSLRRLEELEVTPKPPLQSQTSSQQPFQPLHQSKNIMMKKPKTVAHFNAKELTVKLGEKVVKPGDVLQHKNGTVYVKKIKCRVCNYRAAWESEMVRHELRVHGLEEKKKAPRPIPNLIPIQSSGGSGTPGGTNTSGPPVASGGGNSGGGGGVSSSGGGANTGGSTTSKPPPPPILKIPNLVKGRSAHTTPEKAMSEKDLNDICAKSCPNSSLKDFASLIGDEEAFKNSHDSVPLPIGSKSAFPDKNRLSSPEHSLETKSLPDGFKKKNASFFDKLKEKLMTGAGESCNLVCNWCGHESKCLSESVRHKKLHETKPAGSASPSSGNSVISGAELSSTRCQHCRQRCKTSADLVVHLKSCVEAMKKTEHADDEDEEEEEEDDKIMDVDENREEIKSEDGLEENGDGQKPPHPMENKVFVWTNMGSNDDDSRSKSPQSDECSVVGIETAPGIGAVTSKSKAASHGNLTGNILGQKVMKMKGDHSVKKVYKCPHCSFWASTASRFHVHIVGHLNKKPFECSLCAYRSNWRWDITKHIRLKTVRDSSHERARVLMTDETGRRNYSKYNKYLTLMKVHEPSAESSGSGRRTKPVTQSYGPIEPVPILPAPPKLTPAPALHPSNPSSNLQMQSSTPPPPPPLSQHRPIYPKPPPLHSSYDLKRPMQDSRDDNIPKKKLNVENKKTMWKCKKCLFRDSDRSVVLAHVKEHYRNQCQGGSDAENRGLGGGSRPERNEDEASSGEFMCETCPFVCDTQQAFDQHMEYHFERPEATLRCYVCPYFVSDKMELKEHMILHRDSDGEEGANHSINTSGQSVQNGDAFANKRYKCSICPYVSNSKSQFLYHKQFHRPRGAPFRCNLCSYNVTRRHLLHQHLRLHGINIPIQKTKDCGYEEFEEGGSEPPVDIPTIDTSNLPEIPLVWVSKLGNLTKMFKCRYCPHVNIRKSNIQEHEKMHSSRVKPNSDGTSPNPQQHHCPDCNYVCNNAGVLSSHAKVHQGLFGQVCSLVDLNRSDEAQIRELNALLGREEEGPPEILPHEINKEFKDNTSPPPPPPSLPPPSIKIEKDMDIPNSDGKVLHFCSTCPARFLYQKELEIHTRFHSLQLQFQCESCSYTARQQPHLLAHYKVHTDEYQDRTSSLCEVYPVSGQHPKPKIAIIVDGSEEVGPAWVVVPPQRTGSKEETEYDLDERSGDVVQHGTRIVQKQFACDKCPATFFKSVALQYHMTLHGGSGPHKCRSCDYAVKTYGNLIKHEAVHGKLEPRAKIKVKPKKPVDYVPTSGTDLFRHKTEAAQKVANTPPAPPPPPPPLHIDPEFGVLMHGSPEFIYPTYLKNGKMKEKRYKCHKCPSAFEKREQYKVHLSLHGSKQRYRCERCDYSVKYYANYIQHLRKHQHNDATKAERKMSSDKSVDESGNDDVSEHNDTPSEEVTTPVVSRSAKKMQLSMADQQTIMLMQQRVVSNSVSTPEVLNRCPYCPYSNQRKDGVGSHVKCHSNAKGGAFMCKHCDYTVPQQHFLREHNKLHFSPLKGMRPEAYMKCDRLELWSEPVEQTGDNAKKVLIFKDKGNTVKTDRFLPEISVAVVNGDTEIGEKTFINLKTGEMEVSDDSVENIEKDEDKENQEMKIVCKPEENSEDINNEEENASEVPVKTESVTSESDEAEEPVVNGDIYIVNNGEEEDECGSDDDKKEEKISEEDNDQTSILITGSDSEDSSSDSSSSTDDSEQDSTSSSMTSTHQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-