Basic Information

Insect: Magicicada septendecula
Gene Symbol: -
Assembly: GCA_034769895.1
Location: CM068368.1:705037520-705054489[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.054 72 8.1 0.5 1 21 255 275 255 276 0.94

2 10 0.0078 10 10.7 1.2 1 23 323 346 323 346 0.94

3 10 3.8e-05 0.051 18.0 1.8 1 23 353 375 353 375 0.96

4 10 0.00022 0.3 15.6 1.1 1 23 381 403 381 403 0.98

5 10 0.00069 0.92 14.1 2.5 1 23 409 431 409 431 0.98

6 10 0.00059 0.78 14.3 2.6 1 23 437 459 437 459 0.97

7 10 8.7e-06 0.012 20.0 1.5 1 23 466 488 466 488 0.99

8 10 0.02 27 9.4 3.6 2 23 495 518 494 518 0.95

9 10 7.1e-05 0.095 17.2 0.3 1 20 524 543 524 546 0.91

10 10 0.039 52 8.5 6.6 1 21 552 572 552 573 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.054	72	8.1	0.5	1	21	255	275	255	276	0.94
2	10	0.0078	10	10.7	1.2	1	23	323	346	323	346	0.94
3	10	3.8e-05	0.051	18.0	1.8	1	23	353	375	353	375	0.96
4	10	0.00022	0.3	15.6	1.1	1	23	381	403	381	403	0.98
5	10	0.00069	0.92	14.1	2.5	1	23	409	431	409	431	0.98
6	10	0.00059	0.78	14.3	2.6	1	23	437	459	437	459	0.97
7	10	8.7e-06	0.012	20.0	1.5	1	23	466	488	466	488	0.99
8	10	0.02	27	9.4	3.6	2	23	495	518	494	518	0.95
9	10	7.1e-05	0.095	17.2	0.3	1	20	524	543	524	546	0.91
10	10	0.039	52	8.5	6.6	1	21	552	572	552	573	0.94

Sequence Information

Coding Sequence: atggcagaactcaCACTAAAAGAAAATACGGATTGGGATAAGATAAGGGAAATGTACCAACAAATAATGAAAGACTTAGGTTATCAGCATAAAATGCTAGATGATATGCATAAGGAAATGGACGAGAACACTGAGAGTTGTACATACCATAAAATGCTGCCTCAAAAAACACTTGTAGCCAAAGCAGAGGCACCAGCTCCAGGGTACAAACATAACAAAGATAGTGTTACCATCTTAGCTTATAGTAATGCTAGTGCCAGCCATAAAGTAAACCTCGTAATGACTGGCAAATCGAAAAATCTAAGGGCATTTAAGGGAATTTATAAAAACACTCGCAGTGAAATATGCAAATCAAACAAAAAAGAGGAAAACAGGAAGATTTTTGAAATTGAAACTGAATTTGAAGATGTGGAAATTGAAGAAAATGATATATCTATTGAGGAATGTGACAAATCAGTTCAACCAAATTTAGAAAATATAAGGCGTTCCCTAAGTACAAGTGAAATTGTAAATTGTGCTGAACAAGAAAGGCATGAAGAAGCAATTGATCATGTACAAGAGTCAATGGAAGGACAGTTGCTGAAAGAAGGAGAACAAGCTGTTGCGAATCAAAAAACAAAGTCTAATGAAGGAAAACAGGAAAACGTGAATGAGTTAGGTGAATTGGATACAGTCCATAAGTTTCAGGTTGGATATTATATTGATTTGAGGGAAAATGGTGAAAATTCGAATGATAATTCAAAGCAAACATTACTACAACGTTTTAAGTGTATGGCTTGCTTAAAAGCATTTTCTTCATTAGCCCAGTTATATGATCACTGGAAACATTGTGAACAAAGTGAACAAACTGCATCTGTATCAGAGGAACCTATGTCACAAGATAATTGTAAGGAAAACATGTTAGAAATTGAAGTTACACAAGAAAATGTGCAAAAACAGCAGACATACTGTAGCAAGAATAAAAAACATGAGTGTGAATTATGTATGACAGTGTTCTCCAGAATAGATTTACTGAAGAAACATGTTTTTAAAGAGCATGGTTTCAAGGAAAGCCGTTTCAAATGTATCTTATGCTCAAGAAGTTTTATTAATAAGTATGAACTTAAATATCATATGAGAATACATTCAGATAAGGATGGATTCCAGTGTAAAGTCTGTTTAAAGAAATTTGCAATGCCATCTGCTCTACATATTCATGAAAAATCCCATAGTGATGAAAAACCATACATGTGTGATAAGTGCCCTCAAAAGTTTACTCATTTGTTTGGCCTTGATACACACAAACGAGTACACACAGGTGAGAAACCATATGTGTGCCAGTACTGTTTAAGTGCTTTCAGTCAGCATTCTAGTCTTACAAAACACGAAAAACTTCATGCTGGTAAAGCCAAATTGTTTCAGTGTGATATATGCCGCCGTGTATTTGCAGATGACACACACCTGGAATTGCACCGACGTACTCATAATGGTGAACTACCATGGAAGTGTATGTACTGTGACCAAAGGGCTTTTCATAAGCAATCACAGTTGATACAGCATATGCACCGAGTTCATACTGAAAGTCGCCCCTTTAAATGTAATTTATGTGAGAAATCTTTTATTAGTGCAAATGAACTTAAATCTCATGGTGTGGCTCACAGTTCTGAAAAACCGTTTGAGTGCACATCATGTGGGAAACAATATAAACATATGATGACCCTCAAAAGGCATCATTGTAAAGGTGAAATGGGTgaaaacaaacaaatttgtgaaGGTGATGTTGCTTAA
Protein Sequence: MAELTLKENTDWDKIREMYQQIMKDLGYQHKMLDDMHKEMDENTESCTYHKMLPQKTLVAKAEAPAPGYKHNKDSVTILAYSNASASHKVNLVMTGKSKNLRAFKGIYKNTRSEICKSNKKEENRKIFEIETEFEDVEIEENDISIEECDKSVQPNLENIRRSLSTSEIVNCAEQERHEEAIDHVQESMEGQLLKEGEQAVANQKTKSNEGKQENVNELGELDTVHKFQVGYYIDLRENGENSNDNSKQTLLQRFKCMACLKAFSSLAQLYDHWKHCEQSEQTASVSEEPMSQDNCKENMLEIEVTQENVQKQQTYCSKNKKHECELCMTVFSRIDLLKKHVFKEHGFKESRFKCILCSRSFINKYELKYHMRIHSDKDGFQCKVCLKKFAMPSALHIHEKSHSDEKPYMCDKCPQKFTHLFGLDTHKRVHTGEKPYVCQYCLSAFSQHSSLTKHEKLHAGKAKLFQCDICRRVFADDTHLELHRRTHNGELPWKCMYCDQRAFHKQSQLIQHMHRVHTESRPFKCNLCEKSFISANELKSHGVAHSSEKPFECTSCGKQYKHMMTLKRHHCKGEMGENKQICEGDVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -