Basic Information

Insect: Magicicada septendecula
Gene Symbol: PLAGL2
Assembly: GCA_034769895.1
Location: CM068367.1:220173543-220175204[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 3.7e-07 0.0005 24.3 1.3 1 23 117 139 117 139 0.97

2 7 2.9e-05 0.038 18.4 0.7 1 23 145 167 145 167 0.97

3 7 1.7e-06 0.0022 22.3 3.2 1 23 173 195 173 195 0.98

4 7 0.006 8 11.1 0.2 1 23 202 226 202 226 0.96

5 7 8.3e-05 0.11 17.0 0.2 2 23 234 255 233 255 0.96

6 7 0.00078 1 13.9 2.0 1 23 269 291 269 291 0.97

7 7 7.1e-05 0.094 17.2 2.9 1 23 297 320 297 320 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	3.7e-07	0.0005	24.3	1.3	1	23	117	139	117	139	0.97
2	7	2.9e-05	0.038	18.4	0.7	1	23	145	167	145	167	0.97
3	7	1.7e-06	0.0022	22.3	3.2	1	23	173	195	173	195	0.98
4	7	0.006	8	11.1	0.2	1	23	202	226	202	226	0.96
5	7	8.3e-05	0.11	17.0	0.2	2	23	234	255	233	255	0.96
6	7	0.00078	1	13.9	2.0	1	23	269	291	269	291	0.97
7	7	7.1e-05	0.094	17.2	2.9	1	23	297	320	297	320	0.95

Sequence Information

Coding Sequence: ATGGGCGATGTTTCTACTGCAGCGGTTGGACGAAGACAGTTGCGGTCACAAGGTCCTGTTACTGAAGAAAAGTTGTGCCCAATTTGTAAACATCAGATTGGTTCCTGCATATGTATTGCTACACCATCTGTATCATCAAGTGTATCCAGCAGCCGAGGAAATAAACCCAGAAAAAAGAAAGTGCAGATTGAAAGAACAGAAACAGCTCCAACAACACGACGCCAGTTATTCAAAGAAACCACCACCGATTACTTAGAGTCAAAATCGGATGAAGCAAGGACTAGATTGACTAGTCAACCAGGACCTTCTGGCCTTGGTGATAATACAAAAGTGTCCACAAGGACGCGGCATACCTGTCCAAACTGCCCCAAAAGTTTTAGCAGTCCAGGGAAATTAAATCAGCATATGTATTCACATACAGGTGAACGACCATTTGTGTGTGAACAGTGTCGTAAAGCATTTTCATCAAAATTTAAGCTTGTTCGACATGCTCTGATTCATTCAGATCAGCGTCAGTATGTTTGTCCAATTTGTGAAAGAACTTTTCACCGTAAAGACCATTTAAAAAATCATGCTAAAGTACACAGTCCTGTAAAAAGAAGATATCGTTGTGATCGTGAAGGTTGTGGTAAAGAGTATAGTTCAGTTTTAAGTTACAGAAAGCATGCGGCAATTCATTCTGCTGAAGATGGAAACTTAGAATGCACAATATGTGGAAAGAAATTTCAAAATAAAGAAGAGATAGTGTTACACCTAAAAATACATGCTGGATCAAGAACTGTTAAGACACCAGCAGATAGAAAATATAGATGTGACCACTGTGAAAGAAGTTTTTTTACAGGAAAAGATGTGAGAAGGCATCTAGTCGTTCATACTGGAAAACGTGATTTCCTGTGCCAATTTTGTCCACAGAGATTTGGTAGGAAAGACCATCTTGTTCGTCATATCAAAAAGAGCCATAATTCAACAGGAAAGAAAGGGCGTAAAAAGATAGAAGTGAAGACAAAATCGATAAAAAGTATTTTAGAAGAAACAGGTAGATTGAAggaaagtgatgatgatgatggtgatgataatgtagaagtaaaaacagaaaataaatCGTCATTTGTGTTCTTCAAAGAAGAACAGATTGAAGATCCATCAACAAGTGTTGAAAAATTAAGTCTTTATAAATCTGATGAAACTAAAGGAATAGCTGTAACTTTTTCACAAAACGAGTCCATTCTGCCACACAGTAGTGAACATATATTGCCTGATATTGTTTTTCCATCTCCACCATACCCTTCAGTTTTGCCATCAACAATAGATTTTGAAGCTGGAACATCAGTAGAGGTAAAACCAGAAGTGATGTCAGAGTTCATAGATCTAATACCAAGTCAGTTACCTGTGTTGCCTCCAGGCTGTCTTTTACCAATATCTGAAAGaagtgaagaagaggaagaagaattgCCTCCACTCTTACCAAGCACCCATTTTATTACAACAGATGAAACTCATAATATTCATAGGCAGATTTTGAATTTAATAGGCCCAAATTCCAATCCAGATACATCCTCAGATACAGATATAATTATGGCAAATTTTTTATCATCTAATGAACCTCCATCAAACACCACACCATTACCTAGATTTAATCAAGCTTTCCATCAACAGCCATGA
Protein Sequence: MGDVSTAAVGRRQLRSQGPVTEEKLCPICKHQIGSCICIATPSVSSSVSSSRGNKPRKKKVQIERTETAPTTRRQLFKETTTDYLESKSDEARTRLTSQPGPSGLGDNTKVSTRTRHTCPNCPKSFSSPGKLNQHMYSHTGERPFVCEQCRKAFSSKFKLVRHALIHSDQRQYVCPICERTFHRKDHLKNHAKVHSPVKRRYRCDREGCGKEYSSVLSYRKHAAIHSAEDGNLECTICGKKFQNKEEIVLHLKIHAGSRTVKTPADRKYRCDHCERSFFTGKDVRRHLVVHTGKRDFLCQFCPQRFGRKDHLVRHIKKSHNSTGKKGRKKIEVKTKSIKSILEETGRLKESDDDDGDDNVEVKTENKSSFVFFKEEQIEDPSTSVEKLSLYKSDETKGIAVTFSQNESILPHSSEHILPDIVFPSPPYPSVLPSTIDFEAGTSVEVKPEVMSEFIDLIPSQLPVLPPGCLLPISERSEEEEEELPPLLPSTHFITTDETHNIHRQILNLIGPNSNPDTSSDTDIIMANFLSSNEPPSNTTPLPRFNQAFHQQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -