Basic Information

Insect: Magicicada septendecula
Gene Symbol: -
Assembly: GCA_034769895.1
Location: CM068370.1:19755316-19762676[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.1 2.8e+03 3.1 0.8 3 23 85 105 83 105 0.95

2 15 0.18 2.3e+02 6.5 1.9 1 23 556 579 556 579 0.91

3 15 0.011 14 10.3 0.5 2 23 620 642 619 642 0.95

4 15 0.056 74 8.1 0.8 3 23 651 672 650 672 0.95

5 15 0.00022 0.29 15.6 1.6 2 23 675 696 674 696 0.97

6 15 0.00011 0.14 16.6 1.9 1 23 702 724 702 724 0.96

7 15 5.5e-06 0.0073 20.7 3.7 1 23 730 753 730 753 0.96

8 15 0.67 8.9e+02 4.7 2.2 5 23 766 784 764 784 0.95

9 15 0.0049 6.5 11.4 3.9 5 23 793 812 790 812 0.92

10 15 0.0091 12 10.5 1.6 2 23 828 849 827 849 0.96

11 15 0.00099 1.3 13.6 1.3 1 20 855 874 855 877 0.92

12 15 0.029 39 8.9 3.4 1 23 885 907 885 907 0.98

13 15 0.00073 0.97 14.0 5.6 1 23 913 935 913 935 0.98

14 15 0.00012 0.16 16.4 3.6 1 23 941 963 941 963 0.98

15 15 0.0099 13 10.4 9.1 1 23 969 991 969 992 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.1	2.8e+03	3.1	0.8	3	23	85	105	83	105	0.95
2	15	0.18	2.3e+02	6.5	1.9	1	23	556	579	556	579	0.91
3	15	0.011	14	10.3	0.5	2	23	620	642	619	642	0.95
4	15	0.056	74	8.1	0.8	3	23	651	672	650	672	0.95
5	15	0.00022	0.29	15.6	1.6	2	23	675	696	674	696	0.97
6	15	0.00011	0.14	16.6	1.9	1	23	702	724	702	724	0.96
7	15	5.5e-06	0.0073	20.7	3.7	1	23	730	753	730	753	0.96
8	15	0.67	8.9e+02	4.7	2.2	5	23	766	784	764	784	0.95
9	15	0.0049	6.5	11.4	3.9	5	23	793	812	790	812	0.92
10	15	0.0091	12	10.5	1.6	2	23	828	849	827	849	0.96
11	15	0.00099	1.3	13.6	1.3	1	20	855	874	855	877	0.92
12	15	0.029	39	8.9	3.4	1	23	885	907	885	907	0.98
13	15	0.00073	0.97	14.0	5.6	1	23	913	935	913	935	0.98
14	15	0.00012	0.16	16.4	3.6	1	23	941	963	941	963	0.98
15	15	0.0099	13	10.4	9.1	1	23	969	991	969	992	0.96

Sequence Information

Coding Sequence: ATGGGCTGTTGGCGAGTACGAAACTGGGGCCAGCTTAGCGTCACCACGCGAGACTTCCATTTTTATTGCGTCTTTGAAAACTGGTTTGAGGCGGACTTCCATACCTCGTCCTGCCCTGGAGCCTGGAAACTTTTCGTTGTTGTTCGGGTGATTCACTGGAACTCAATTAGCGACATTCCTCGCCTTATATGGAAAGTGAAAACACCTGCATCAGCCATGAATAGTCCCAGTCCAGCTCCTGGACAGGTATGCTGTCCTGTGTGCACACTTTTCCTCCGTGAAGGAATGACGTTACAGACACATCTGTACACGCATCCAGTTGACCAGGTCATAGATGCGCTGGTGCGAGTATCATTGAACCAGGCTCAGCAAGCACCAGTGCCTGTAGCCAGCAGTCACTACACAGCGATAACGTATCAGCAGTTTCTCAGTTCGACAACAAGCATTCCATCCGTTGAACCAAATCTTATGTTGCTTAATCCGTCTGTAGTCTCACCGCAGTTTGTTGACACACCTCCACCACTTCTCCAGGCACCTTTTCAAAATGTTTTACGATCTTCGATGTCTGTACTACCATATAATTACTGTACAAGTAATCAGCAACCTACCAGTAATAATACAAGTATTAGTTCTACTGTCACTGGTAGCATtagtagtaataacaataacaataataatactatcAGTaataatagggaggtaattaatGATAGTAATGGCAACAATAGGGTTGAAAGTGAACAACACGAACATCAGGATAGTTTTTCAGTTATTACTCCAAGTTGTCAGGAGCCCACAGTCATATCAGGTAGTGCGAATGAAGGTGGCTTAAATCAGCTGGAAGATTCAGAAAATTGTAGAGCAGATTGCACAGAAACCCAGCCTGAAGACGATTTCTGTCCTGAAACGCCTAAATCTCAACATAACGATTCAGATGAAGAAGTCGAGTGTGAAGAAGAAAGGACTGAATTTGTAGATACTTATGTTTGTTGTGACAATAATATTGGCACAGTAATTTCAGACAGTCAGCGCCTAATAGAAAATGATCCGAATTTAGAATATGATAGAGACTTTAGGTCAGAGGGTGGCTTCAATGAAGAACACCTAATATTTGACCAGCAGGGTCCCAGAGAGGAGACTGTATCCCCTGTATCGTCAGTAAGCAACTGGAGTTCAGGGTCTACATTGCGTGTCAGGAAAGATCTTAATGATAATAGCCATAATTCTCTATTCAACTACGAACGGACATCAGCTGATCCTTTAGAAATATCTTCGGAGGCTTTCAATGATAATGGTCCCAGATCAAACTCAGGCCTCCTAAATTTAGATACTCCGTTGTGTACAAGAGGATATAGTGTCAACGAACGCTTAGTAGAAGATCCTGAAGATTATATTGAAAACAAAGATGAAAATTCAGATCAGAGTCCACCACTGAATATACATAGCGATGAGTTAATGCCACCAAGGGGTGAACTTTCTGGCCAAGAAAGCCTTGGAGCTACTGAAAACTCCGTATGGGAGATGCAGGCTGTAGTTCGTGAGAAATCTCCAGAAATGCCTACATCATATCAGCTGTTAGAAAGAGGAAGGTGGGAAGTTTCTGTCAGCTCAAACAATGAATTAAGTACAGCAGCAAGGCCGGCAGAGAAGCGACCGAGTGTTGTATATAAATGCTTGCAGTGTGATGAAAGTTTCAAGTGTCCAAAAGAGAGAAGAGTACATGTTTCTTCTGTTCACCAGAACAAACGTACACTAGTGAAAAAAGAAGAACCTCTTCGGTCATTGTCACCAAACAAATTTGATCCGCTCTTTGTGAAACAAGAAGTGGCTCGAGTGAAGACTGAACCCAATTGTAAGACCTGTCAAGACTGTGGCCTGGAGCTGCCTACGATAAAGGAACTGAAGAAACACAGAAAGGAACAGCATCAGGATAAAAAAGCAAACAGAATTTGTACGACGTGTCATGAATATTTTCCAGACACCAAACTTTATAGATTACATATAGCTAAAGTACATCCTTTGGAATGTGTCGACTGTGGAAAGTGTTTCTTGTCAAGACCAAATTTAACTCTCCATCAGAAACGACATCTTAAAGTGAAACCATATCATTGCAGTGTTTGTGATAAGTCGTTTATCACTCGGCAGAAACTGACGGAACATGAAAACGGTCATTCCGGTAACGCACCATATAAATGTACACTTTGTGACAGAACTTTTAAGCGTTATTCAAATTTAATACAGCACAAAAATTATTaccatttaaaattaaaaaagaaacttaaaGATTATTTTTGTCATTGTGGTGAAGTGTTCCATTCTGTGAAAAAACTAGAGTGGCATAAAGAAATCCATGAACAGAAACCAAAACACTGTATTTACTGTAGCGAAAAATTTATACACAGTGCAAGTCTGACGCGGCATATACGGCGCTCTCACGATAATGAATATTTACCGGACACAAAAGTTAAAATGGAAAACGTTCAGTGCCCGATATGTCATCAGGTGTACTTAAAAACTTCGCTGGCGAGTCACATGCGTCACATACACAGTGGCGAGAAGAAGTTCTCGTGTACCACGTGTGCAAAAGAATTCACTACCAAGTGGAATCTGCAGTTACACAAGTGGACCCACGCTTCCCGAACTAGTAAACCTTTTAAATGCAAACTCTGTAAAGCGGCGTTTTTCCATATAAAGGACTATCAGGCTCACAACAGGTCTCATCGCAATATACGACCGTACACATGCAATCATTGCGGACAGCAGTTTATACGTAAATACAATTGCATTCGTCACGTTAGAGAACACGAAATTTCCAAGTCTTTCAGCTGTCAAGTCTGTAGTAAACTGTTTCACAGAAGTTATTACTTAACGGAACATATGAGAGTTCACACTGGCGTCAAACCTTATTCATGTCATATTTGTTCTAAAACGTCTAGTACTAAATCCAACCACAACAAACATGTAAAAACCCATCATGCTCGTGAACCTTTGAACACTGAAGGTTAG
Protein Sequence: MGCWRVRNWGQLSVTTRDFHFYCVFENWFEADFHTSSCPGAWKLFVVVRVIHWNSISDIPRLIWKVKTPASAMNSPSPAPGQVCCPVCTLFLREGMTLQTHLYTHPVDQVIDALVRVSLNQAQQAPVPVASSHYTAITYQQFLSSTTSIPSVEPNLMLLNPSVVSPQFVDTPPPLLQAPFQNVLRSSMSVLPYNYCTSNQQPTSNNTSISSTVTGSISSNNNNNNNTISNNREVINDSNGNNRVESEQHEHQDSFSVITPSCQEPTVISGSANEGGLNQLEDSENCRADCTETQPEDDFCPETPKSQHNDSDEEVECEEERTEFVDTYVCCDNNIGTVISDSQRLIENDPNLEYDRDFRSEGGFNEEHLIFDQQGPREETVSPVSSVSNWSSGSTLRVRKDLNDNSHNSLFNYERTSADPLEISSEAFNDNGPRSNSGLLNLDTPLCTRGYSVNERLVEDPEDYIENKDENSDQSPPLNIHSDELMPPRGELSGQESLGATENSVWEMQAVVREKSPEMPTSYQLLERGRWEVSVSSNNELSTAARPAEKRPSVVYKCLQCDESFKCPKERRVHVSSVHQNKRTLVKKEEPLRSLSPNKFDPLFVKQEVARVKTEPNCKTCQDCGLELPTIKELKKHRKEQHQDKKANRICTTCHEYFPDTKLYRLHIAKVHPLECVDCGKCFLSRPNLTLHQKRHLKVKPYHCSVCDKSFITRQKLTEHENGHSGNAPYKCTLCDRTFKRYSNLIQHKNYYHLKLKKKLKDYFCHCGEVFHSVKKLEWHKEIHEQKPKHCIYCSEKFIHSASLTRHIRRSHDNEYLPDTKVKMENVQCPICHQVYLKTSLASHMRHIHSGEKKFSCTTCAKEFTTKWNLQLHKWTHASRTSKPFKCKLCKAAFFHIKDYQAHNRSHRNIRPYTCNHCGQQFIRKYNCIRHVREHEISKSFSCQVCSKLFHRSYYLTEHMRVHTGVKPYSCHICSKTSSTKSNHNKHVKTHHAREPLNTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -