Basic Information

Insect: Magicicada septendecula
Gene Symbol: -
Assembly: GCA_034769895.1
Location: CM068368.1:705157125-705158645[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.017 22 9.7 0.1 1 20 145 164 145 166 0.94

2 10 0.0016 2.2 12.9 1.5 1 23 229 252 229 252 0.94

3 10 5.7e-07 0.00076 23.8 0.5 1 23 259 281 259 281 0.97

4 10 6.7e-07 0.00089 23.5 0.8 1 23 287 309 287 309 0.99

5 10 6.6e-06 0.0087 20.4 0.6 1 23 315 337 315 337 0.98

6 10 1e-05 0.013 19.8 3.0 1 23 343 365 343 365 0.98

7 10 5.4e-06 0.0071 20.7 0.3 1 23 372 394 372 394 0.99

8 10 0.00031 0.41 15.2 1.1 2 23 401 424 400 424 0.96

9 10 6.2e-06 0.0082 20.5 2.1 1 23 430 452 430 452 0.98

10 10 0.00065 0.86 14.1 2.8 1 21 458 478 458 479 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.017	22	9.7	0.1	1	20	145	164	145	166	0.94
2	10	0.0016	2.2	12.9	1.5	1	23	229	252	229	252	0.94
3	10	5.7e-07	0.00076	23.8	0.5	1	23	259	281	259	281	0.97
4	10	6.7e-07	0.00089	23.5	0.8	1	23	287	309	287	309	0.99
5	10	6.6e-06	0.0087	20.4	0.6	1	23	315	337	315	337	0.98
6	10	1e-05	0.013	19.8	3.0	1	23	343	365	343	365	0.98
7	10	5.4e-06	0.0071	20.7	0.3	1	23	372	394	372	394	0.99
8	10	0.00031	0.41	15.2	1.1	2	23	401	424	400	424	0.96
9	10	6.2e-06	0.0082	20.5	2.1	1	23	430	452	430	452	0.98
10	10	0.00065	0.86	14.1	2.8	1	21	458	478	458	479	0.95

Sequence Information

Coding Sequence: ATGCTTTGTTTTAATTTTCAGGAAAGGTgcaatacatacaaaaatacaatatgtCAGAGAAAAGAGAAAATCGCGGAAGTTTTTGAAATAGAAACTGGATGTGAAGGTGTAGAAAATGTAATGTCCATTGAGGAATGTAACACGTCAGACCAAATGGGCCTACAAAATCAAAGCTATTCCTTAGAAATAAGTGAGATTATAAGTTGTGCAGGACAAGAAAGAGATGAAGCAGTGATTGAACATGTACAGGAGTCAGAGAAAGAACATATGTTTAAAGAAGAGGTGCAAGAAATTCAGAATCTAGGAAAGGAAGATGTGAACAATTTAGATGTATTGGATACAGTCCATCAGTTTCAGGTTGGATGTTATGTTGATTTGAAAGAAAACTGTGAAGATTCAAATGATAATTCAGAACCAACCTTACTACGGCGTTTTAAGTGTATGACTTGTTTAAAAGTGTTTCCTTCATTAGCCCATTTGGATGATCACTGGGAAGAGTGTGAAAGAAATGAACAACCCGAATTCGTATCACAGGAATCTACATCACAGGAACTCGTGTCACAGGATAATGGAGACTGCAGAGACACCAATGACATTAATTCTAAGGAAAGCACGTTATGTGTTGTTGAAAGTCAGCCAGGTGTTGTTGTGAATAACAGGCagtcatataataaaaataaaaaccatgtATGTGAATTGTGTAAAAAGACTTTTCCCAAAGTAATTTTATTGAGAAAACATGTATTTAAGGAACATGCAACTAGAGAAAGGTGTTTTGCGTGTAGTGTATGTCCAAGAAGATTTATTGATAAGTATGAACTCAAGTATCATATGAGAATACATTCAGATAAGGATGGGTTCCAGTGTAAAATATGTTTAAAGAAATTTGCAAGGCCATCTGCTTTGCGTACTCACGAACGAATGCATACTGGTGAAAAACCATTCATGTGTGATATGTGTCCACAAACATTTACTCAGTTATACAGCCTGATGACACATGAACGAATACATACAGGTGAAAAACCATATATGTGTCAATATTGTTCAAGGGCTTTTGCTCAGCACTCTAGTCTTAGAAAACATGAGAGACTTCACGCTGGGGGAGCTAAGATGTTCCAGTGTGATATATGCCGTCGGATGTATGCAAATAACTCTGAGCTGGAATTACATCTCAGTACTCATAGTGGTGAACTGCCATGGAAGTGTTCAATTTGTAAAACTAGAGCTTTCCGAAAGCCATCAGAACTATCAAAGCATATGCTCAGATTTCATTCTGAAAATCGTCCCTTTCAGTGTAGTTTATGTGACAAATCTTTTACTTTTGCACACGAACTTAAATCCCATGGTATTACACACCTTTCTGAAAAACTATTTGAGTGCCTTTTATGTGggaaacaatataaaaataaactgACCTTAAGAAGACATCTTTGTAAAAGTGACATGGCTGAAAATGAACAAATCTGTGAAAATGAAATGGTTGATGATGAACTAAatataagtgaaaatttaaaaGATTAA
Protein Sequence: MLCFNFQERCNTYKNTICQRKEKIAEVFEIETGCEGVENVMSIEECNTSDQMGLQNQSYSLEISEIISCAGQERDEAVIEHVQESEKEHMFKEEVQEIQNLGKEDVNNLDVLDTVHQFQVGCYVDLKENCEDSNDNSEPTLLRRFKCMTCLKVFPSLAHLDDHWEECERNEQPEFVSQESTSQELVSQDNGDCRDTNDINSKESTLCVVESQPGVVVNNRQSYNKNKNHVCELCKKTFPKVILLRKHVFKEHATRERCFACSVCPRRFIDKYELKYHMRIHSDKDGFQCKICLKKFARPSALRTHERMHTGEKPFMCDMCPQTFTQLYSLMTHERIHTGEKPYMCQYCSRAFAQHSSLRKHERLHAGGAKMFQCDICRRMYANNSELELHLSTHSGELPWKCSICKTRAFRKPSELSKHMLRFHSENRPFQCSLCDKSFTFAHELKSHGITHLSEKLFECLLCGKQYKNKLTLRRHLCKSDMAENEQICENEMVDDELNISENLKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -