Msep042847.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068367.1:933855564-933869214[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.00012 0.16 16.4 4.6 1 23 453 476 453 476 0.96 2 24 0.0003 0.4 15.2 0.5 1 23 489 512 489 512 0.94 3 24 0.014 18 10.0 2.5 2 21 519 538 518 539 0.93 4 24 0.011 15 10.3 1.5 2 21 549 568 548 569 0.96 5 24 0.00011 0.15 16.6 0.4 3 23 604 625 602 625 0.96 6 24 0.00057 0.76 14.3 1.5 1 23 652 674 652 674 0.95 7 24 0.023 30 9.3 4.2 1 23 680 703 680 703 0.97 8 24 0.044 58 8.4 1.0 1 23 711 733 711 733 0.93 9 24 0.0025 3.3 12.3 0.2 1 23 742 765 742 765 0.96 10 24 6.2e-05 0.082 17.4 0.5 2 23 793 814 792 814 0.96 11 24 0.55 7.3e+02 4.9 0.8 1 18 828 845 828 849 0.87 12 24 0.17 2.2e+02 6.5 0.2 2 19 880 897 879 899 0.89 13 24 0.039 52 8.6 0.9 2 19 916 933 915 935 0.95 14 24 0.22 3e+02 6.2 0.1 3 20 944 961 943 963 0.87 15 24 5.7 7.5e+03 1.7 0.0 2 21 970 989 969 990 0.87 16 24 0.6 8e+02 4.8 7.7 1 21 1005 1025 1005 1026 0.92 17 24 0.0057 7.5 11.2 0.5 2 20 1033 1051 1032 1053 0.93 18 24 0.0043 5.7 11.6 2.5 2 19 1079 1096 1078 1096 0.95 19 24 3.9e-05 0.052 18.0 2.2 1 23 1113 1136 1113 1136 0.97 20 24 0.0098 13 10.4 0.2 2 23 1192 1213 1191 1213 0.95 21 24 0.008 11 10.7 0.7 1 23 1225 1247 1225 1247 0.95 22 24 0.012 16 10.1 0.7 1 23 1272 1294 1272 1294 0.95 23 24 6.4e-05 0.085 17.3 2.0 1 23 1380 1402 1380 1402 0.97 24 24 0.017 23 9.7 3.6 1 23 1430 1454 1430 1454 0.91
Sequence Information
- Coding Sequence
- ATGCCAAGTACTGTATTAACTCTTCTTAACCTTTTGCAAGAATCACAATTGAAAAATGTTGGTGAAGTCGTAATATTGTCCGAGAGCAGtgatgaagatggtgatgatgttgaTAATGCTGATGCTGATGATGACATTGATGATAATAATGGTGGTGGTGGTAATGTAATTGTATTGGATAGTGATGATGACAAGCCTGAACAAGTTAACAGTGAAAACTCGTCTTCTGATAAGCAGATTTTGGATGGTGAAACAGTATGTAATACTAGAAAACATGAAGATAATGCTAATAAGCAAAAGCCCCACCTATTTTGCAATAAACCTGTTGTAAATACAGGCACTGACAAAGTTTCTTCAGTTAATAATGTTCAAACATCTGAACATAAAGCAGTGGGAGGCATATTAAATGAGACTGCACAGGCAACAGAAATTATGTTAACAGATCCTGTTAACAACGAGAATATTTTAAAGAGTATATTGACTTCCAAAAGTTCAAAGTGTGATACAGATAATGAAATTAATGATATAAATTCAAGGACACAGTGTAATCAGACATATAAATCAGGCAGTAGGCCTTCGTATTTTAGGTCAGATAATGATGAATTGTGTAGTAAGAAACTGTCACCAGTTACAGATAATGTAGAAAAAATTACTTTTGAAGAAAATTCATTGGTTCAACCCAATCTTACCCATGCTAATACAAAAAATGTGTGCGATCAGGAAAACGGTGAGTCTCAAAGAAATAGTACAGATATTTCATGCCAGAATACTGATTTAGTTATTGAAGGGATTACAACACTAACGGAAAAAGAAGGGTTTAGTGAAAGTTCAAATAATGATTGTGAAACAGTTCAGAATCCAGTACTGAGAGGCATTAGCAACAAAACCTGGGGAGACGATGACTTAACTGTTCAAAGGCAATCAAACAATCCAGATCATATTGTAGTCCATTGTGAACCAGATTTTCCAACCAGCTCTGTTGCCGAGATATCAGCTGTTGATATAAAGGAAGAACCATTAGATGAAGATGAAGTATTAGTAGAAGAAGATCCTTTGACCTTTTcatcattttatattaaaaaagaaCCCCAAGAGTGGtctgaaaataatgaaacagaaGATGTAAATTTTGATATGACTGAATCAGGCAATGCTTCATACAATGAAAATACATCACCACCACAAGTTTTGAGTAGTGGTGAATTGTTTTGTGAGCCGTGCCAGAGTACACAGAGTAAATTTTCTAATTGGGTTCGACATTGTAGGACACGTTTACATAAGCGAAGAACAAAAAGTGATGATGTAGGTGATAAGTCAATGTCCAGATATGTGGATGATAAAAAAGAGACGCCGTCTTTTCAATGTCACCTATGTCCATGTGTATTTGGGTACCAACAAAATCTCAAAAGGCATATAAGAGATAAACATGATCCAGCATCACAGGATTTTGTCAGCAGTGGTGATTATGCTTGCTCACAGTGCCCAAAGAGCTTTGACACAACAAAAGCATTACGCGGGCACATGCTTTTTACACATTCTGATTCACGGTACTGTACATGTGAAAAATGCAAACTTAAGTTTCCATCACTTAGTTCACTTCTTACACATAAGCGTTCTTGTGGGAAGAGAGGATTAGTCTCTAAGAAATGCACGAGGTGTTTAAAAGTATTTGCAACTTCAAAACTATTTCTGAAGCACTTGAGATTTTGTAAACAAGCATTTTATAAACGGATTAACACAAATAATCTAACTGTAAAATACATAAACACTCCACCTCAAGCGCATGCTCCAGACAACAGAGGTCTTGCTTGTACTTTGTGTGATATTTCATTTCAACAGTATTCAACATTAGTGAAGCATATGAATATGTACCACTTTGGATACACTGAAAGTAAAGATGATAATGACATGAATCCTGAAGCTAATAAAGGAAGTTTTAGTACTGATAATGAATTCTCTTGCAAATATTGCCCACAGTCATTTAGTAGCAGGAAAGCATATGTCAGTCATGTTACACAACATGTAAGAAAGCAAGAATTTGATTGTAAATTTTGTGGTTACCAAAGTACTTCAAAACAGATGTTTAGACACCATGTAAAAACAGTACATTTTAGCCAGTTTGGACAAAATTTCTTATGTTGGATATGTTTTACTGCCTTTGGTACAAAGTCAGAATTTTATACTCATAAACTGCAGCATAAAAAAGTTGAGAAGATAAAAATATATTCATGTAATATTTGTAATAATTCTTTCAGCAGTATTGCTGCCATAGAGAAACATAAGAGACTTGTTCATGGTGACGAGAGTGCTTTTACTGATCATGatagtgaagaaacaaataatttaaataacagtaaaaattcTCGCTTCAATACACAATgcaaaatatgtaagaaaatttaTTCAACAGTGGGTAATCTAAATAGACACGTATTATTACATAAAAAGAAACTTACAAGTATCAGTTCAGTTGGTGGTCTACATCGATGTGTAGAATGTTTTAAAGTATATTCATCTGCTGCTGGTTTGAACTTCCATAAAAAATTTTGCAAACGGAAAAATAGATTGTTCATTACCACAAATTATAAGGTACCTGTGCCACCATATAATTCAGCATTAACGAAAGGTGGTCGAGTGAAATGTAATAGATGTGACAGAATGTTTGCATCGAGTGCTATACTTTATAAACACACATTTTTAAAACGTTGCCCACTTTTTCCAATTGAAAGATTTGGAAAAAATATTTCGTGTGTAAACTGTGATAGGCAGTTTCCTAGTTCCATCAGTTTGAGAAGACACTGTAAAAATTGTTCATCAGATGGACGTGACTGCAAATTATGTGGTGAAGTATTTTCTTCTGTATTTGTGCTGTCTGAACACACTTCAATCTGTAGTGGTTCACAACTGAAGTGTACAGTTTGTGGTAACCTGTTACCATCTGTAGAAGACTTGAGGGAACATAAGAAAGCTTGTTCATTACAGCTTACTCCTAGTATAAGAACTGGTAATATTTTCTGTTGTTCATATTGCAGTAAAGAATTTAAGTATTCTAAATGTTTTAAAGAACATGAAATGAAGTGTGCCACCATGTCAAAAAAATGTGTGAATTGTCAAAAACGATTTATGTCAGCAGCAGAACTGCAGAAACATAAATTATCTTGTTTTGTTAATGTTGAGTTGAACTCGATTGATACAGTATCACCAGATCAGGGTGTAACACAGCGTACTTACTGTACATGTTCTGGATGTAATGAAACTTTCAGTACTCGTGAAAATTTTGAAAGTCATCCTTGCCAGAAACAAACTGAAATAAAATCAGAATCTTTGGATGAGAATTACAGTTGTAATGTATGCTTTCAGCAGTTTTCATCTGTGTCTTACTTAAATCGACATATGAGATATAACCATTCAGATCACCAGATGGATGTAAGTGTAGATGAACGAAAGCGTTTCATTTGCCCTTTATGTCCAAACATTATTTTCCATAAAAAGGAAGGTTTCCTAGAACACAGAGACAGGGTTCACAGAGACAAGCCTAAGGTAGATTATTTAATGAATCATGGAGAAAAACTGACATGTGAATTATGCGACCAACAGTTCACAGATGAAACTGTGTATCAGCAGCATATGGAGGATCACATAAGTCCCTCCGGGAATATAGCAAGTGATCAGTTCACATGTGATTTATGTAACAAACAGTTTCCAACTTACAAAAGTGTATTGAGTCACAGGGCAGGACATTTTAGAGGGAAGAGTTTTTCAGAAGAAACTACAAGCTCTTCTGGTAGCTTAGATATTACAAAGCGTACACAGTTTAGGTGTGATTTGTGTAATAAACAGTTTGGTACCTACAAAAGTGTTATAAGCCACAGAGCTGGACACTTTAGGACAAAAGCATTAAACAAACTGGAGGTAACAGCAATGGATAAAAAAGTggacaaattaaaaattaaacatgtTCATTGTAAAGTGTGTGATAAACTGTTATCTATACATTCAATGAAGAAACACAAGAAGATACATATGAGAGAAGAACACTACTCAACACAAAATCAAGCTGCAGCAGTAACCGATTACTATTCAGAAAATAATGAATCCAGTCCAGTATTTGATAAAGCAAATTGCAGTCCTACTTTGTTTCAGTGTATTGAGTGTGGCAAATCATTTAAATACAGAAAAATGTTTAACGAACATATGAAAGTGCATTTAGATCAAGATGAACTTGAAAGTGGTTCTTATAATGACGAAGCTTCAGAGAGCACTCTGACGTCTTCCAGTAGTGAGGCATATTATTGTAAATATTGCGATCTGTCATGGAGGCATAAAAGTAATTACTTACGACATGTtattactaaaaaacataaaatattggaAGCCCAGTTTTCTAGTGATATATAA
- Protein Sequence
- MPSTVLTLLNLLQESQLKNVGEVVILSESSDEDGDDVDNADADDDIDDNNGGGGNVIVLDSDDDKPEQVNSENSSSDKQILDGETVCNTRKHEDNANKQKPHLFCNKPVVNTGTDKVSSVNNVQTSEHKAVGGILNETAQATEIMLTDPVNNENILKSILTSKSSKCDTDNEINDINSRTQCNQTYKSGSRPSYFRSDNDELCSKKLSPVTDNVEKITFEENSLVQPNLTHANTKNVCDQENGESQRNSTDISCQNTDLVIEGITTLTEKEGFSESSNNDCETVQNPVLRGISNKTWGDDDLTVQRQSNNPDHIVVHCEPDFPTSSVAEISAVDIKEEPLDEDEVLVEEDPLTFSSFYIKKEPQEWSENNETEDVNFDMTESGNASYNENTSPPQVLSSGELFCEPCQSTQSKFSNWVRHCRTRLHKRRTKSDDVGDKSMSRYVDDKKETPSFQCHLCPCVFGYQQNLKRHIRDKHDPASQDFVSSGDYACSQCPKSFDTTKALRGHMLFTHSDSRYCTCEKCKLKFPSLSSLLTHKRSCGKRGLVSKKCTRCLKVFATSKLFLKHLRFCKQAFYKRINTNNLTVKYINTPPQAHAPDNRGLACTLCDISFQQYSTLVKHMNMYHFGYTESKDDNDMNPEANKGSFSTDNEFSCKYCPQSFSSRKAYVSHVTQHVRKQEFDCKFCGYQSTSKQMFRHHVKTVHFSQFGQNFLCWICFTAFGTKSEFYTHKLQHKKVEKIKIYSCNICNNSFSSIAAIEKHKRLVHGDESAFTDHDSEETNNLNNSKNSRFNTQCKICKKIYSTVGNLNRHVLLHKKKLTSISSVGGLHRCVECFKVYSSAAGLNFHKKFCKRKNRLFITTNYKVPVPPYNSALTKGGRVKCNRCDRMFASSAILYKHTFLKRCPLFPIERFGKNISCVNCDRQFPSSISLRRHCKNCSSDGRDCKLCGEVFSSVFVLSEHTSICSGSQLKCTVCGNLLPSVEDLREHKKACSLQLTPSIRTGNIFCCSYCSKEFKYSKCFKEHEMKCATMSKKCVNCQKRFMSAAELQKHKLSCFVNVELNSIDTVSPDQGVTQRTYCTCSGCNETFSTRENFESHPCQKQTEIKSESLDENYSCNVCFQQFSSVSYLNRHMRYNHSDHQMDVSVDERKRFICPLCPNIIFHKKEGFLEHRDRVHRDKPKVDYLMNHGEKLTCELCDQQFTDETVYQQHMEDHISPSGNIASDQFTCDLCNKQFPTYKSVLSHRAGHFRGKSFSEETTSSSGSLDITKRTQFRCDLCNKQFGTYKSVISHRAGHFRTKALNKLEVTAMDKKVDKLKIKHVHCKVCDKLLSIHSMKKHKKIHMREEHYSTQNQAAAVTDYYSENNESSPVFDKANCSPTLFQCIECGKSFKYRKMFNEHMKVHLDQDELESGSYNDEASESTLTSSSSEAYYCKYCDLSWRHKSNYLRHVITKKHKILEAQFSSDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -