Msep012524.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- ZNF131
- Assembly
- GCA_034769895.1
- Location
- CM068367.1:278140094-278153258[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 7.8e-05 0.1 17.0 0.2 2 23 66 88 66 88 0.95 2 18 0.00017 0.23 15.9 0.4 1 23 233 255 233 255 0.97 3 18 5.1e-07 0.00068 23.9 1.8 1 23 292 314 292 314 0.99 4 18 2.7e-05 0.035 18.5 1.6 1 23 320 343 320 343 0.96 5 18 0.00021 0.28 15.7 0.1 3 23 351 371 350 371 0.99 6 18 3.1e-06 0.0042 21.4 3.0 1 23 377 399 377 399 0.99 7 18 1.1 1.5e+03 3.9 3.6 1 23 405 427 405 427 0.94 8 18 4.1e-05 0.054 17.9 0.7 1 23 433 455 433 455 0.96 9 18 2e-05 0.026 18.9 0.5 1 23 461 484 461 484 0.97 10 18 3.2e-06 0.0042 21.4 2.7 2 23 528 549 527 549 0.96 11 18 5.7e-05 0.076 17.5 2.6 1 23 555 578 555 578 0.95 12 18 0.0088 12 10.6 0.1 2 23 597 618 596 618 0.97 13 18 3.4e-05 0.045 18.2 0.5 1 23 624 648 624 648 0.91 14 18 0.016 21 9.8 1.3 2 23 663 684 663 684 0.97 15 18 2e-07 0.00026 25.2 0.1 1 23 688 710 688 710 0.98 16 18 0.00012 0.17 16.4 2.5 1 23 716 738 716 738 0.99 17 18 1.8e-06 0.0024 22.2 1.5 1 23 744 766 744 766 0.99 18 18 5.8e-06 0.0077 20.6 0.2 1 23 772 794 772 794 0.97
Sequence Information
- Coding Sequence
- ATGGAGTATGTTCCTAATGATAAACTGAACGGAGAAGATTATCACTCTTCTACAAGTGGAAATGGAAAACAAGAAGATAAAAgGTGTCCAACATCTTTCAAAGAATTTCATCAAGTGAAAATGTCATCAAGTAAAACTAAACTTAAGAAGAAGTTATCCTGTTGGCTGGAAAACAACTTGGACGTAGATCCACCAGTATGTCCCAACTGTGGAACAGAGTTTAATAAGAGAAGTGAACTAGCAACACACCTTGCAAAAACACATACTGTGGATGTTTTCCACTGTGAACAATGTGATAGATTATTTCATTACAATAAATCTCGTTTTGTTGACCACATAAAAAATCATAATTTGGAAAAAATGGGTCTTCTGTCAAAGTCTTCTGAGGTGTCAGATTTGCAGAATGATCACAACATTATATCAGTAACACAAGAAAAAATTACATCTTCACACAACACTTTAGAAAATAATAATGTAAACATGAAACACCTGCTATCAGAAAAACAAACTGTGTGTGTGAACGAAGAAGTCCAGCATTTTGTAAGaagcaaattaaaaaagaaaaaaactaaGGCAAATAGACGTAGCAGCAATAGTAGTaatggcagcagcagcagcagcagcactagTAATAATAGTAGCAACTGTGGAAGTAATAATACAACTAcagatggaagtaaaaataatagtgGTCTATACCCATGTGAAGAATGCCAACAATCATTCCCGCTTTTATCAAAATATAACAAACATATGATTCAACATAGAAATAATGGAAgcaacattgtaattaataatggCAAAGATGACTCAAGTGAATCAGATAGTGGTATGAAAAAGGATGATGACTTTATTGATATAGCTGGAGAAATATTCAGATGTGACGAATGTGGGAAAGGTTTCAAATTAAAAGAAAGTTTGAAGTCTCATCAGAGAAAACACACAGGTGAAAAACCATACATTTGCAATGTTTGTAACAAAAAATTTGCTCGTAATAGTGGGCTCCTCTATCACCTAAAACATGTGCATATGGGAATAAAAGCTCATGGTTGCGATATTTGTGGTCGTACTTTTGCAATGAAAGCAGCCATGGAAGATCATCGTAGAATTCATACAGGAGAGCGGCCATATGTTTGCCATTCATGTGGTAAATCTTTTAAAACAAGAGCATCTCTTTATATCCACAGTAGAACACATACTGATGAATTTCCTCATCCATGTACATTTTGTAACCACAGATTCCGTTGGCGGCAACAGCTACTTGGACATCTAACAATTCATACTGGTGAAAAAAATCATATATGTGATGTGTGTGGCAAGCGATTTGGTGTTAAAAATGATTTAACAAGACACAAAATTGTGCATTCAGATAGTAAACCGTTTGTTTGTCCTATATGTGCTTTTCCATTTGCTCAGAAACGTTACTTAAAAAATCACATGCAGTCAAAACATAAAGTGAAgtTAAGTGGTTCTTCGCCTCAGTTCCAGAACTTGAAAGACAAAGAGGGCAACCAAGAAACACCAgatcataaaacaaataaaaatctcAAAAAGAAACGAGTAAGGAAAGCAAATCTCTGTGTTTGTACAGTATGTGGAAAAACttttaattatagtaataatttaagAATACACATGTTTAGCCATTCAGATACTAGACCTTTCTCTTGTGACTTGTGTGGTGCTAGCTTTAAACGTAAAGACCATGTTCGTAACCATTACAAAGCAAAACATGAAGGTATAAAATTTATACGAAGACCAGGTTATGCTCGAGCCAAAAAATCGTTAGTGTGTAATATGTGTGGTAATATATATGGAAGTAAACTAGCACTGTCAGATCACTTACGCAGACATACAGGTGAGCGCCCATTTCAGTGTTCAGTATGTGGTAAAGAATTTCCTGCAAAATCTGCATTACGTCATCATGAGCTCACATCTTTACACAGTTACAAATTAAATTTGAGTGCTGAAAATGACAGTCATAGAAAATGTGAATTatgtgatgctgagttttatacaAGGATGAGTTATTATAGACacaaattaaagcataaaatgtcaTACATCTGTGACATTTGTGGAAAAAGTTTTGCAGAAAAAGGCCAGTTGAATGCACATCAGAAGATACATTCCGATGAAAGACCTTTTAAATGTGACAAGTGCAACAGAAGTTTTAAATTGAGAGGAGTTCTACAATCACACTACAAGATGCATACAGATGAAAGACCTTATCCATGTCCCCATTGCCCTTGGAAGTGTCGTAAAAATTCAGACTTAGTAGTTCATATTCGAACACATACTGGTGAAAAACCATTTGACTGTAAAATATGTGGAAGAGGATTTGCTCAAGCTGGAGATATGCGCAAACACAGACTGacacataatatacttaaagactaA
- Protein Sequence
- MEYVPNDKLNGEDYHSSTSGNGKQEDKRCPTSFKEFHQVKMSSSKTKLKKKLSCWLENNLDVDPPVCPNCGTEFNKRSELATHLAKTHTVDVFHCEQCDRLFHYNKSRFVDHIKNHNLEKMGLLSKSSEVSDLQNDHNIISVTQEKITSSHNTLENNNVNMKHLLSEKQTVCVNEEVQHFVRSKLKKKKTKANRRSSNSSNGSSSSSSTSNNSSNCGSNNTTTDGSKNNSGLYPCEECQQSFPLLSKYNKHMIQHRNNGSNIVINNGKDDSSESDSGMKKDDDFIDIAGEIFRCDECGKGFKLKESLKSHQRKHTGEKPYICNVCNKKFARNSGLLYHLKHVHMGIKAHGCDICGRTFAMKAAMEDHRRIHTGERPYVCHSCGKSFKTRASLYIHSRTHTDEFPHPCTFCNHRFRWRQQLLGHLTIHTGEKNHICDVCGKRFGVKNDLTRHKIVHSDSKPFVCPICAFPFAQKRYLKNHMQSKHKVKLSGSSPQFQNLKDKEGNQETPDHKTNKNLKKKRVRKANLCVCTVCGKTFNYSNNLRIHMFSHSDTRPFSCDLCGASFKRKDHVRNHYKAKHEGIKFIRRPGYARAKKSLVCNMCGNIYGSKLALSDHLRRHTGERPFQCSVCGKEFPAKSALRHHELTSLHSYKLNLSAENDSHRKCELCDAEFYTRMSYYRHKLKHKMSYICDICGKSFAEKGQLNAHQKIHSDERPFKCDKCNRSFKLRGVLQSHYKMHTDERPYPCPHCPWKCRKNSDLVVHIRTHTGEKPFDCKICGRGFAQAGDMRKHRLTHNILKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -