Msep184175.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068372.1:131772090-131778002[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00033 0.44 15.1 2.0 1 23 92 114 92 114 0.99 2 28 0.0024 3.2 12.3 1.1 1 22 120 141 120 141 0.96 3 28 3.3e-05 0.044 18.2 1.3 1 23 147 170 147 170 0.96 4 28 1.1e-05 0.014 19.7 1.9 1 23 176 198 176 198 0.99 5 28 0.00024 0.32 15.5 1.5 1 23 204 226 204 226 0.97 6 28 0.0002 0.27 15.7 1.2 1 23 302 324 302 324 0.98 7 28 0.047 63 8.3 0.2 1 23 362 384 362 384 0.94 8 28 0.00026 0.34 15.4 0.3 1 23 429 451 429 451 0.98 9 28 0.00039 0.51 14.9 0.3 1 23 496 518 496 518 0.98 10 28 0.00047 0.62 14.6 0.3 1 23 563 586 563 586 0.97 11 28 0.0016 2.1 12.9 0.8 1 23 627 650 627 650 0.95 12 28 3.9e-05 0.052 18.0 0.8 1 23 674 697 674 697 0.97 13 28 0.097 1.3e+02 7.3 0.4 1 23 761 784 761 784 0.91 14 28 0.019 26 9.5 0.8 1 23 793 816 793 816 0.96 15 28 2.5e-05 0.034 18.6 5.4 1 23 890 913 890 913 0.96 16 28 6.6e-05 0.088 17.3 0.8 1 23 929 952 929 952 0.96 17 28 6.7e-05 0.09 17.2 1.1 1 23 970 993 970 993 0.96 18 28 0.00046 0.61 14.6 0.2 1 23 1012 1035 1012 1035 0.98 19 28 0.00042 0.56 14.7 1.8 2 23 1110 1132 1109 1132 0.95 20 28 9.6e-06 0.013 19.9 1.3 1 23 1148 1171 1148 1171 0.96 21 28 0.00068 0.91 14.1 1.6 1 23 1213 1236 1213 1236 0.96 22 28 0.0008 1.1 13.9 0.9 1 23 1256 1279 1256 1279 0.97 23 28 1.4e-05 0.019 19.3 4.0 1 23 1302 1325 1302 1325 0.96 24 28 6.9e-05 0.092 17.2 3.5 1 23 1795 1817 1795 1817 0.97 25 28 0.0032 4.3 11.9 2.0 1 23 1822 1844 1822 1844 0.97 26 28 0.0056 7.4 11.2 0.3 2 23 1856 1877 1855 1877 0.94 27 28 0.0021 2.8 12.5 1.9 2 23 1916 1937 1915 1938 0.94 28 28 0.0003 0.4 15.2 0.0 1 23 1944 1966 1944 1966 0.96
Sequence Information
- Coding Sequence
- ATGTTCTTCTTTCAGAAACAGGTGTCAGAAGAGAATTTGAATACTAAGCAAGGAACTGATGTTTTACCCAGTAGTAAGTTGAGTGGTGGAATTCACTGTAACCAGACTCCTACGATCACAGTTAATCTGTCACGGACTGAGACTGCGTACAACGtacaagaaaatgtaaataatattcaGTGTCAATCAAGTGAAAGACCACTATTTCGGAGCGATGCAGATGCAGCGGTAACCAGTAAAAATGATTCGCAtaaatcaattgataaaattgttTATCAGTGTGATATATGTAACAACACTTATGATCATGATAGTGACTTAAAAAAGCATAGAGCAACACACAGTTCTAGTAGAAAGTATGAATGTTTGGTATGTAATACAGGTTTCACTAAATTCTCTCAGTTAAAAGACCATAAACGCAAATATTGTGGGAGAAAATTCCAGTGCACGCTTTGTGACAAAATTTTTGAAACATCATATACTTTAGAGACTCATTATAAATTAATGCATAATGTTTGtcattattataaatgtaacatatgTCAAAAAGAGTATACATCAGAGAGACATTTATCAGCACATATATTGACACACAAAGAAAACTTAGAACACAAgtgtaaaatatgttttaaaacatttgaagatgtttCTAAATTGAATGCACATGAACTAGTACACAGTGTAAGGGAACGTAGGAGCAACCCATGTAACAAAGCATATGAACTACCTGAAAGTTTGTCACAGACTGATAAATTAGTTAACAATAAAAAGAGTGACATCCCTTGTCACATATTACAGGGCACTTCACTCTCTGCTAGTAGTAATAGTGAATCATTAACAGGTGTTAATGATTGCGGAACACGTAAGTTGCGAAATCCAGTGAGACCCACTAGTATTAAAAAACACAAATGTGCAATATGTGACAAAGCTTTTATGAGGCGTTATGATATGGAGCAGCATGTGTTGCGACACAGTGGCAAAAAGAACAACTCATCTGATTCTGTTGACCGCCCACTTGACAGTAGTCAAAATAAGGCACTTACAGAACCTCACAGTCAGGAAGTTGTGGGGGAAGTTGGAAAGTATAAATGCAACATTTGTGGCAAAATTGTTTTAGGACAATACAGATTGAAGCAACATGTATCGATTCATAAAAACTATAAGAATGAGAGTATGTGTGAAGAGAGTAATTCTTGTGACCGTGTGACACAGTCACTTCATAGTAGTCAAAATAAAGCACTTACAGGACTTAATAATCAGGAAGTTGCGGGGGAAGTTGGAAAGTATAAATGCAACATTTGTGGCAAAATTGTTTCAGGACAATACAGATTGAAGCAACATGTATCGATTCATAAAAACTATAAGAATGAGAGTATGTGTGAAGAGAGTAATTCATGTGAACCTGTGACACAGTCACTTCGTAGTAGTCAAAATAAAGCACGTACAGAACTTGACAGTCAGGAAGTTGTGGGGGAAGTTGGAAAGTATAAATGCAGCATTTGTGGCAAAATTGTTTCAGGACAATACAGATTGAAGCAACATGTATCGATTCATAAAAACTATAAGAATGAGAGTATGTGTGAAGAGAGTAATTCATGTGAACCTGTGACACAGTCACTTCGTAGTAGTCAAAATAAAGCACTTACAGAACTTGACAGTCAGGAAGTTGTGGGGGAAGCTGGAAAGTATAAATGCAGCATTTGTGGCAAAATTGTTTCAGGAAAATACAGATTGAAGCAACATGTATCGATGATTCATAAAAACTATAAGATTGAGAGTATGTGTGAAGAGAGTAATTCATGTGAACCTGTGACACAGTCACTTCGTAGTAGTCAAAATACAGCACTTACAGAACTTGACAGTCAGGAAGTTGGAAAGTATAAGTGCAACATGTGTGGCAAAATTGTTTCAGAACAGCACAGATTGAAACAACATGTGTTGTTGGTTCATAAAATCTATCCCCATCATAGTAGTGAAGATGAAGTAATTatagaaagagttaatgaaaaaagtGGAAAATATGAATGCAGTATCTGTAATAAGCCTTTTTCGTGGCGTAGTAGTCTGAAGCGACATAAGTTAACAGTTCACAAAGCACATGTGAATGTCAAACAGAAAATGTGTAATGAACCTTCACAAGTAAATGATAATGCAGCACAAGTAGTGAAATATTCTAATAATACCAGTTTTATAAATAAGGAAGAATGTAGTAAACATGATAATCCAACAGGAAATAAGGTCCATAATCATAAAATAGACATTGGTGATAATAGTAGGATCTATGAATGCATTCTGTGTAATAAAACATTTGACTCAGGTTACAGTTTGTTACAACATAAGACAATTGTTCATAGTATTGCAAACAATATGAAAATGTACAAATGTGATATATGTGGCATCGCCTATAAATGGGCTTGCAATTTGTCACAGCACAAATTACGTGATCATAGAAACAACGAAGATGGACCTAATACAGAATGCAAAGACATTTCACCTCACAATGATGACAGTATTAATATGACATGCCCAGGAAGTGATGAGTCATCAGAATTCAAATTATCTAAGGAGGTTCAGgtatgtgaaaataataaaatagctaTAAACAAAATAGAGTTTAGAGATTGTAATCCACCAAAGGATAATCAAATATTGCAGGACACTGATATGCATAAATGTAATTTCTGTAACAAAGTCTTCAGGCAGCGTTATCAATTGAAACGCCATAAATTATCAGGACATAGAAAGAAGTTTAGGAAATCAGTTCTGAGTTATTGTAGAAGAAAATTTAAATGTGATATTTGTGGCAAATACTTTACAGTGGAATCCAGTGTGAAACGACACAAACTGTCTGTTCACAGAAAAAATGGGAGTAAGTCTGACATACCGTCACAGCTCATTTCTGACATATATAAGTGCGCCACATGTGACAAAGAATTTTCAAGTCATTGGGCTATGAAGCGACATATGTTAGAAGTCCACAGAAGAGTAACTACAACACCTGGTAGTCAACATGTTGAGGATGAAGCAAGAAATTACAAATGTAACCTTTGTGGCAAGATCTATTCTTGGCCCTGGGGTCTGAAGAGACATAGAATGAAAGCTCACAAAGGATGTAGCGATGTCAAACAAAACATATGTATCGGCAGCTCAGAAGCAACTGGGAGTACACACGAAGCATTTGAACCCAATAATACCAGTTATGTAAATCAGGAAGaacataaatattttcaggtgTGTGAAAATAATAAGAGAGCtgtaaatgtaaaaaattatgGAGATTGTAATCAACCAGAAGATAACCAAGTATTCCAGGATACTAATATGCTTAAATGTAatttatgttataaaatctttAGGCAATATTATCTTTTGAAACGTCATAAATTGTCAGTTCATATGAACAAGAAATTTATGAAGTCAGGGGGCAatgatataaaaaaatttaaatgtgACATATGTGACAAATTCTTTACACGTCAAGACTCTGTAATGCGACATAAATTGTCAGTGCACAAGCGTGATATGCAAAAACAAGTAGTTGGTGGCTGCTTTCAGCCTGCAAATGGTAATCCAAcagaacacagaacacttaacaaAGTAGTACAGAAGACAAAGAATATCCCTAGAATTGTATTGCATAAATGTAAcatatgtaacaaaatttttaggTGGCCTTACCTTTTGACACGTCATAAATTATCTGCTCACAGACATAGAAAGCATGAGGCTAACAAAATATCACACCACAAAAAGGCCATTAGAAAATTCAAGTGTGAAATCTGTGACAGCGCTTTTACATTAGCTTGTAATATGAGGCGGCATATTTTATCTGTTCATAAAATAAAGATGCACGAGTATGACAAAATATTACAGGACTCTTCTCGTAAAAGTCCAAAGAATATTCATAAGTGCGATATCTGTGACAAATCTTTCACTAGGGCTAGCCATGTGATACGACATAAACTGTCTCGTCATAGAAACGAGAAGAATGAATCTGACAAAGTGCAATCACAACATTTGTCATTTCAGAATGTTGACGAAAACATAGCATCTGCAAGTGGTGTCCAGTTGTGTGACAAAGCCTTCGCAAAAGAAAGCAGTATTGTTAAAAATGGATTGACAGTTCATGAAAACAAGATAAATGACTCTTGTAAACTACCAAATAATTTATCTCAAAATGTGTCATTTCAGTATATTGATAATAACAAAGCGTCTGTAGACACTGGTAGTGCAGAACTTGAATTATGTGGTGAAATCATCACGAGAAACAGTCCTGATgatcaaaataaattattaattcagagAAATAAGATGATTGAATCTTACAGGGCACCGTCCCAAAATGCATCAGTTCAGCATATTGATAACAACAAAGCCTGTGTAGACGCTGGTGACTCGGATGTTGAAAATGTCACCACAGACAGCCCTGATGCTCAGCATAAATTATTGATTCACAGAACTGAGATGAATGAATCTTATAGGGCACCATCCCAAAATCCATCAGTTCAGCATATTGATAAAAACAAACCCTGTGTAGACGCTGGTGACTCGGACGTTGAAATTGTCACCACAGACAGCCCTGATGCTCAACATAAATTGTTGATTCATGGAAATGAGATGAATGAATCTTATAGGGCACCCTCCCAAAATGCATCAGTTCAGCATATTGATCAAAACAAAGCCTGTTTAGATGCTGGTGACTCAGACATTGAAATTGTCACCACAGACAGCCCTGATGCTcaacataaattattgattcacAGAAATGAGATGAATGAATCTTATAGGGCACCACCCCAAAATGCATCAGTTCAGCATATTGATAACAACAAAGCATGTGTAGTTGCTGGTGACTTGGACATTAAATTATGTGGTGAAATTGTCACCACAGACGGCCCTGATGCTCAACATAAATTATTGAGTCACAGAAATGAGATTAATGAATCTTCTTATAGAGCACTGTCCCAAAATGCATCAGTTCAGCATATTGATCAAAACAAAGCCTGTGTAGACGACGCTGGTGACTCAGGCGTTGAAATTGTCACCACAAACAGCCCTGATGCTCAAGATAAATTATTGATTCACAGAAATGAGATTAATGAATCTTATAGAGCACTGTCCCAAAATGCAACAGTTCAGCATATTGATAACAACAAAGCATGTGTAGACGCTGGTGACTCGGACGTTGAATTATGTAGTGAAATTGTCACTACAGACACCCCTGATGCGCAACATAAATTATTGAGTCACAGAAATGAGATTAATGAATCTTATAGAGCACCATCCCAACCTGTGTCAATTCAGCATATTGATAAAAACAAAGTATCTTCGCTTATTGATAGTTCAGCAGAAATTAAATTGCagaataaaaatattgaaaagttCAGGTGTGATGTATGTGGCAAGAATTTTAAAAATCTCCATAAGTTGACACAGCATAAATCAGTACACATAAGTGTGAAATACAACTGTAATTTATGCAACCAAAGTTTTGTTGAACCTAAGTTTTTATTGCAACATATGTCACATCATAGTGTCACAAAGAAGTCTTGCAACAACACAACTAGGTGTAGTGTTTGCAAGAAGGATTTCGCGAGTGTGTGGACTTTAAAACGACATGCAGTTATTCACAAACGAAAGACTCTAACTCTAACTAACGAAAAGACTCTCACGGCAGTTATTCACAAACGAAAGACTCTAACTCTAACTAACGAAAAGACTCTCACAAATGAAAGTGAGATTTTAAAATGCTACTTGTGCGATAAAATATTTGTCAAGTCGTTTGATTTGTTACAGCACAAAATGGTTCATCACAGTAATGTTGCTGAGTTTTTCTGTGATGTTTGTGACAGAGGTTTTGTGACAGCTGACGCTCTGTCACAACACGTCTTGGTCCACAGTGATGAAAACTAA
- Protein Sequence
- MFFFQKQVSEENLNTKQGTDVLPSSKLSGGIHCNQTPTITVNLSRTETAYNVQENVNNIQCQSSERPLFRSDADAAVTSKNDSHKSIDKIVYQCDICNNTYDHDSDLKKHRATHSSSRKYECLVCNTGFTKFSQLKDHKRKYCGRKFQCTLCDKIFETSYTLETHYKLMHNVCHYYKCNICQKEYTSERHLSAHILTHKENLEHKCKICFKTFEDVSKLNAHELVHSVRERRSNPCNKAYELPESLSQTDKLVNNKKSDIPCHILQGTSLSASSNSESLTGVNDCGTRKLRNPVRPTSIKKHKCAICDKAFMRRYDMEQHVLRHSGKKNNSSDSVDRPLDSSQNKALTEPHSQEVVGEVGKYKCNICGKIVLGQYRLKQHVSIHKNYKNESMCEESNSCDRVTQSLHSSQNKALTGLNNQEVAGEVGKYKCNICGKIVSGQYRLKQHVSIHKNYKNESMCEESNSCEPVTQSLRSSQNKARTELDSQEVVGEVGKYKCSICGKIVSGQYRLKQHVSIHKNYKNESMCEESNSCEPVTQSLRSSQNKALTELDSQEVVGEAGKYKCSICGKIVSGKYRLKQHVSMIHKNYKIESMCEESNSCEPVTQSLRSSQNTALTELDSQEVGKYKCNMCGKIVSEQHRLKQHVLLVHKIYPHHSSEDEVIIERVNEKSGKYECSICNKPFSWRSSLKRHKLTVHKAHVNVKQKMCNEPSQVNDNAAQVVKYSNNTSFINKEECSKHDNPTGNKVHNHKIDIGDNSRIYECILCNKTFDSGYSLLQHKTIVHSIANNMKMYKCDICGIAYKWACNLSQHKLRDHRNNEDGPNTECKDISPHNDDSINMTCPGSDESSEFKLSKEVQVCENNKIAINKIEFRDCNPPKDNQILQDTDMHKCNFCNKVFRQRYQLKRHKLSGHRKKFRKSVLSYCRRKFKCDICGKYFTVESSVKRHKLSVHRKNGSKSDIPSQLISDIYKCATCDKEFSSHWAMKRHMLEVHRRVTTTPGSQHVEDEARNYKCNLCGKIYSWPWGLKRHRMKAHKGCSDVKQNICIGSSEATGSTHEAFEPNNTSYVNQEEHKYFQVCENNKRAVNVKNYGDCNQPEDNQVFQDTNMLKCNLCYKIFRQYYLLKRHKLSVHMNKKFMKSGGNDIKKFKCDICDKFFTRQDSVMRHKLSVHKRDMQKQVVGGCFQPANGNPTEHRTLNKVVQKTKNIPRIVLHKCNICNKIFRWPYLLTRHKLSAHRHRKHEANKISHHKKAIRKFKCEICDSAFTLACNMRRHILSVHKIKMHEYDKILQDSSRKSPKNIHKCDICDKSFTRASHVIRHKLSRHRNEKNESDKVQSQHLSFQNVDENIASASGVQLCDKAFAKESSIVKNGLTVHENKINDSCKLPNNLSQNVSFQYIDNNKASVDTGSAELELCGEIITRNSPDDQNKLLIQRNKMIESYRAPSQNASVQHIDNNKACVDAGDSDVENVTTDSPDAQHKLLIHRTEMNESYRAPSQNPSVQHIDKNKPCVDAGDSDVEIVTTDSPDAQHKLLIHGNEMNESYRAPSQNASVQHIDQNKACLDAGDSDIEIVTTDSPDAQHKLLIHRNEMNESYRAPPQNASVQHIDNNKACVVAGDLDIKLCGEIVTTDGPDAQHKLLSHRNEINESSYRALSQNASVQHIDQNKACVDDAGDSGVEIVTTNSPDAQDKLLIHRNEINESYRALSQNATVQHIDNNKACVDAGDSDVELCSEIVTTDTPDAQHKLLSHRNEINESYRAPSQPVSIQHIDKNKVSSLIDSSAEIKLQNKNIEKFRCDVCGKNFKNLHKLTQHKSVHISVKYNCNLCNQSFVEPKFLLQHMSHHSVTKKSCNNTTRCSVCKKDFASVWTLKRHAVIHKRKTLTLTNEKTLTAVIHKRKTLTLTNEKTLTNESEILKCYLCDKIFVKSFDLLQHKMVHHSNVAEFFCDVCDRGFVTADALSQHVLVHSDEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -