Msep180000.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068372.1:42665536-42670491[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.8 9.3e+02 4.0 0.5 17 38 105 123 97 128 0.86 2 14 1.6 8.1e+02 4.2 0.3 16 38 132 151 124 153 0.88 3 14 0.49 2.5e+02 5.8 0.8 5 38 150 179 146 183 0.83 4 14 0.095 48 8.1 0.2 15 39 187 208 181 212 0.83 5 14 0.12 58 7.8 1.2 15 39 215 236 206 240 0.77 6 14 0.015 7.4 10.7 1.5 15 40 243 265 235 268 0.85 7 14 0.21 1.1e+02 7.0 1.4 15 38 271 291 267 293 0.89 8 14 0.092 46 8.2 1.9 15 38 327 347 318 352 0.90 9 14 1.3 6.6e+02 4.5 0.7 15 38 355 375 346 380 0.87 10 14 0.19 97 7.1 0.3 15 39 383 404 378 408 0.82 11 14 0.007 3.5 11.7 1.1 7 40 404 433 398 436 0.82 12 14 0.8 4e+02 5.2 2.7 6 38 431 459 430 464 0.83 13 14 0.26 1.3e+02 6.7 0.2 17 38 469 487 466 491 0.85 14 14 1.1 5.6e+02 4.7 1.2 15 29 495 509 487 520 0.81
Sequence Information
- Coding Sequence
- ATGTTGATTTGTTTTTCTGATGCTAGTGGAATTGTTCACGCAGAATTTCTTCCTCCGCGTCAAAGTGTTAACCAGGAATTCTACCTGTTGATGTTAATTTCGAACATACGTTCAGATATAAATGAAGAAATATGTTACAATAGGCGAACTAGTTCAGTTGAGCAGAGGGAACCTGAAAATTTGATTCAGCTGCACACATTAACAGAGAGGAATGCAGATCAGAAGGAGAGTACAAGAAACAAATTTGACAAAAATTTGGTTACTCTCAATCACTTGAGAGATAGGAAATTTAAACATAGTGGAATTAAAACGTATAAGTGTGATGTGTGTTATAAAACGTTTGCTAGGTCATATAATTTGTCACAACATAAACAAATCcacaatgaaattaaaatatatgaGTGCGATGTGTGTCTTAAAACCTTCACCCAGAAATCTAATTTGTCACAGCACAAACAAATCCACAGTGAAATTAAAAAGTATGAGTGTGATGTGTGTCTAAAAACCTTCACCCTGTCATCTAATTTGTCACAACATAAACAAATCCACAGTGGAATTAAAATGTATAAGTGCGATGTATGTCAGAAAACATTTACCCGGTCATCTGATTTGTCAGGACATATGCAAATCCACAGCGGAATTAAAAAATATCAGTGCGATGTGTGTCATAAGACCTTCAACCAGTCATCTAGTTTGTCAGGACATATGCAAATCCACAGCGGAATTAAAAAATATGAGTGTGATGTGTGTCATAAGACCTTCACCCAGTCATCTAGTTTGTCACGACATATGCAAATCCACAGTGGAATTAAAAAGTACGAGTGTGATGTGTGTCATAAAACCTTCACCATGTCACGTAATTTGTCACGGCATAAACAAATCCACAATGGTATTAAAAGGTATAAGTGTGATGTGTGTCTGAAAACCTTCACCCAGTCATCGTATTTGTCACAGCATAAACAAATCCACAATGGAATTAAAAAGTTTGAGTGTGATGTGTGTCATAAAACCTTCAACCAGAAATCTAATTTGTCACAGCACAAACAAATCCACAGTGGAATTAAAAAGTATGAGTGTGATGTGTGTCTAAAAACCTTCACCCTGTCATCTAATTTGTCACAACATAAACAAATCCACAGTGGAATTAAAATGTATAAGTGTGATGTATGTCAGAAAACGTTTACCCGGTCAGCTGAATTGTCAGCACATATGCAAATCCACAGCGGAATTAAAAAGTATGAGTGTGATGTATGTCATAAGACCTTCACCCAGTCATCTAGTTTGTCACGACATATGCAAATCCACAGTGAAATTAAAAAGTACAAGTGTGATGTGTGTCATGAAACCTTCACCATGTCACGTAATTTGTCACAGCATAAACAAATCCACAATGGTATTAAAAGGTATAAGTGCGATGTATGTCAGAAAACATTTACCCGGTCATCTGATTTGTCACGACATAAACAAATCCACAGTGGAATTAAAAAGTACGAGTGTGATGTGTGTCATAAAACCTTCACCCAGTCACCTCATTTGTCACGGCATAAACAAATCCACAATGGAATTTAA
- Protein Sequence
- MLICFSDASGIVHAEFLPPRQSVNQEFYLLMLISNIRSDINEEICYNRRTSSVEQREPENLIQLHTLTERNADQKESTRNKFDKNLVTLNHLRDRKFKHSGIKTYKCDVCYKTFARSYNLSQHKQIHNEIKIYECDVCLKTFTQKSNLSQHKQIHSEIKKYECDVCLKTFTLSSNLSQHKQIHSGIKMYKCDVCQKTFTRSSDLSGHMQIHSGIKKYQCDVCHKTFNQSSSLSGHMQIHSGIKKYECDVCHKTFTQSSSLSRHMQIHSGIKKYECDVCHKTFTMSRNLSRHKQIHNGIKRYKCDVCLKTFTQSSYLSQHKQIHNGIKKFECDVCHKTFNQKSNLSQHKQIHSGIKKYECDVCLKTFTLSSNLSQHKQIHSGIKMYKCDVCQKTFTRSAELSAHMQIHSGIKKYECDVCHKTFTQSSSLSRHMQIHSEIKKYKCDVCHETFTMSRNLSQHKQIHNGIKRYKCDVCQKTFTRSSDLSRHKQIHSGIKKYECDVCHKTFTQSPHLSRHKQIHNGI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00947326;
- 90% Identity
- iTF_00947326;
- 80% Identity
- iTF_00947326;