Basic Information

Gene Symbol
-
Assembly
GCA_034769895.1
Location
CM068368.1:597239361-597322803[-]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.0014 0.31 15.8 0.0 49 87 19 65 6 65 0.80
2 8 1.4e-06 0.00031 25.4 0.2 30 87 181 243 149 243 0.79
3 8 3.8e-06 0.00085 24.1 0.2 30 87 359 421 327 421 0.78
4 8 3.8e-06 0.00085 24.1 0.2 30 87 537 599 505 599 0.78
5 8 1.4e-06 0.00031 25.4 0.2 30 87 715 777 683 777 0.79
6 8 1.4e-06 0.00031 25.5 0.1 30 87 893 955 861 955 0.80
7 8 1.2e-06 0.00026 25.7 0.1 30 87 1071 1133 1039 1133 0.80
8 8 1.9e-06 0.00042 25.0 0.2 30 87 1249 1311 1217 1311 0.79

Sequence Information

Coding Sequence
ATGGGTCGCTGTGTACACTGTGTACCCGGTTGCAAATCCAATTATGAAGCGAATGACAAAGCTGTGGTGTGCATTAAACATTTTGAACCAAAGTTTTTGGTTAGGGAAGACGTTTTTCCTGTTGAAAATGGTGATCCTATACGTGTGCCAAGAAAAATTCCAAAGCTAACGAACGATGCATATCCCACTATCTTTCCTAATCAGCCTTCCTATCACAAATTAGCTATTCCTAAAGAAAGAAAGAATCCTCAAGAACGTGTTCAGACGCTCTTGCAAAGAGATGAAGCTAGTTTTAGTGATTGGTGTGAACATGACAATATACCTgactttcagtattttaaaagtgaagtgCAGAAAAGGAATGTACACCCATTTACAATCTCAGTAAAGGATGATTATGTAGCCTTTATTAAATTAAAGGATGATTCCTTTAGTGATGTGCCATCAGTTTCAGTGTGCTTCAAAATATCAAATTCATTAGAAGTACAAGTGTTTCATAAAAATGTGTGTTTGCCTTCAGAAACATTTAAATGGATATTACAGGGAAAATGGTTGAAGCTGATTCACAGAGATAATTTTGAAGCGAATGACAAAGCTGTGGTGTGCATTAAACATTTTGAACCAAAGTTTTTGGTTAGGGAAGACGTTTTTCCTGTTGAAAATGGTGATCCTATACGTGTGCCACGAAAAATTCCAAAGCTAACGAACGATGCATATCCCACTATCTTTCCTAATCAGCCTTCCTATCACAAATTAGCTATTCCTAAAGAAAGAAAGAATCCTCAAGAACGTGTTCAGACGCTCTTGCAAAGAGATGAAGCTAGTTTTAGTGATTGGTGTGAACATGACAATATACCTgactttcagtattttaaaagtgaagtgCAGAAAAGGAATGTACACCCATTTACAATCTCAGTAAAGGATGATTATGTAGCCTTTATTAAATTAAAGGATGATTCCTTTAGTGATGTGCCATCAGTTTCAGTGTGCTTCAAAATATCAAATTCATTAGAAGTACAAGTGTTTCATAAAAATGTGTGTTTGCCTTCAGAAACATTTAAATGGATATTACAGGGAAAATGGTTGAAGCTGATTCACAAAGATAATTTTGAAGCGAATGACAAAGCTGTGGTGTGCATTAAACATTTTGAACCAAAGTTTTTGGTTAGGGAAGACGTTTTTCCTGTTGAAAATGGTGATCCTATACGTGTGCCACGAAAAATTCCAAAGCTAACGAACGATGCATATCCCACTATCTTTCCTAATCAGCCTTCCTATCACAAATTAGCTATTCCTAAAGAAAGAAAGAATCCTCAAGAACGTGTTCAGACGCTTTTGCAAAGAGATGAAGCTAGTTTTAGTGATTGGTGTGAACATGACAATATACCTgactttcagtattttaaaagtgaagtgCAGAAAAGGAATGTACACCCATTTACAATCTCAGTAAAGGATGATTATGTAGCCTTTATTAAATTAAAGGATGATTCCTTTAGTGATGTGCCATCAGTTTCAGTGTGCTTCAAAATATCAAATTCATTAGAAGTACAAGTGTTTCATAAAAATGTGTGTTTGCCTTCAGAAACATTTAAATGGATATTACAGGGAAAATGGTTGAAGCTGATTCACAAAGATAATTTTGAAGCGAATGACAAAGCTGTGGTGTGCATTAAACATTTTGAACCAAAGTTTTTGGTTAGGGAAGACGTTTTTCCTGTTGAAAATGGTGATCCTATACGTGTGCCACGAAAAATTCCAAAGCTAACGAACGATGCATATCCCACTATCTTCCCTAATCAGCCTTCCTATCACAAATTAGCTATTCCTAAAGAAAGAAAGAATCCTCAAGAACGTGTTCAGACGCTCTTGCAAAGAGATGAAGCTAGTTTTAGTGATTGGTGTGAACATGACAATATACCTgactttcagtattttaaaagtgaagtgCAGAAAAGGAATGTACACCCATTTACAATCTCAGTAAAGGATGATTATGTTGCCTTTATTAAATTAAAGGATGATTCCTTTAGTGATGTGCCATCAGTTTCAGTGTGCTTCAAAATATCAAATTCATTAGAAGTACAAGTGTTTCATAAAAATGTGTGTTTGCCTTCAGAAACATTTAAATGGATATTACAGGGAAAATGGTTGAAGCTGATTCACAGAGATAATTTTGAAGCGAATGACAAAGCTGTGGTGTGCATTAAACATTTTGAACCAAAGTTTTTGGTTAGGGAAGACGTTTTTCCTGTTGAAAATGGTGATCCTATACGTGTGCCACGAAAAATTCCAAAGCTAACGAACGATGCATATCCCACTATCTTCGCTAATCAGCCTTCCTATCACAAATTAGCTATTCCTAAAGAAAGAAAGAATCCTCAAGAACGTGTTCAGACGCTCTTGCAAAGAGATGAAGCTAGTTTTAGTGATTGGTGTGAACATGACAATATACCTgactttcagtattttaaaagtgaagtgCAGAAAAGGAATGTACACCCATTTACAATCTCAGTAAAGGATGATTATGTTGCCTTTATTAAATTAAAGGATGATTCCTTTAGTGATGTGCCATCAGTTTCAGTGTGCTTCAAAATATCAAATTCATTAGAAGTACAAGTGTTTCATAAAAATGTGTGTTTGCCTTCAGAAACATTTAAATGGATATTACAGGGAAAATGGTTGAAGCTGATTCACAGAGATAATTTAGAAGCGAATGACAAAGCTGTGGTGTGCATTGAACATTTTGAACCAAAGTTTTTGGTTAGGGAAGACGTTTTTCCTGTTGAAAATGGTGATCCTATACGTGTGCCACGAAAAATTCCAAAGCTAACGAACGATGCATATCCCACTATCTTTCCTAATCAGCCTTCCTATCACAAATTAGCTATTCCTAAAGAAAGAAGGAATCCTCAAGAACGTGTTCAGACGCTCTTGCAAAGAGATGAAGCTAGTTTTAGTGATTGGTGTGAACATGACAATATACCTgactttcagtattttaaaagtgaagtgCAGAAAAGGAATGTACACCCATTTACAATCTCAGTAAAGGATGATTATGTTGCCTTTATTAAATTAAAGGATGATTCCTTTAGTGATGTGCCATCAGTTTCAGTGTGCTTCAAAATATCAAATTCATTAGAAGTACAAGTGTTTCATAAAAATGTGTGTTTGCCTTCAGAAACATTTAAATGGATATTACAGGGAAAATGGTTGAAGCTGATTCACAGAGATAATTTAGAAGCGAATGACAAAGCTGTGGTGTGCATTAAACATTTTGAACCAAAGTTTTTGGTTAGGGAAGACGTTTTTCCTGTTGAAAATGGTGATCCTATACGTGTGCCACGAAAAATTCCAAAGCTAACGAACGATGCATATCCCACTATCTTTCCTAATCAGCCTACCTATCACAAATTAGCTATTCCTAAAGAAAGAAAGAATCCTCAAGAACGTGTTCAGACGCTCTTGCAAAGAGATGAAGCTAGTTTTAGTGATTGGTGTGAACATGACAATATACCTgactttcagtattttaaaagtgaagtgCAGAAAAGGAATGTACACCCATTTACAATCTCAGTAAAGGATGATTATGTTGCCTTTATTAAATTAAAGGATGATTCCTTTAGTGATGTGCCATCAGTTTCAGTGTGCTTCAAAATATCAAATTCATTAGAAGTACAAGTGTTTCATAAAAATGTGTGTTTGCCTTCAGAAACATTTAAATGGATATTACAGGGAAAATGGTTGAAGCTGATTCACAGAGATAATTTTGAAGCGAATGACAAAGCTGTGGTGTGCATTAAACATTTTGAACAAAAGTTTTTGGTTAGGGAAGACGTTTTTCCTGTTGAAAATGGTGATCCTATACGTGTGCCACGAAAAATTCCAAAGCTAACGAACGATGCATATCCCACTATCTTTCCTAATCAGCCTTCCTATCACAAATTAGCTATTCCTAAAGAAAGAAAGAATCCTCAAGAACGTGTTCAGACGCTCTTGCAAAGAGATGAAGCTAGTTTTAGTGATTGGTGTGAACATGACAATATACCTgactttcagtattttaaaagtgaagtgCAGAAAAGGAATGTACACCCATTTACAATCTCAGTAAAGGATGATTATGTAGCCTTTATTAAATTAAAGGATGATTCCTTTAGTGATGTGCCATCAGTTTCAGTGTGCTTCAAAATATCAAATTCATTAGAAGTACAAGTGTTTCATAAAAATGTGTGTTTGCCTTCAGAAACATTTAAATGGATATACAGGTTACAAATGCATCGAGTTTAA
Protein Sequence
MGRCVHCVPGCKSNYEANDKAVVCIKHFEPKFLVREDVFPVENGDPIRVPRKIPKLTNDAYPTIFPNQPSYHKLAIPKERKNPQERVQTLLQRDEASFSDWCEHDNIPDFQYFKSEVQKRNVHPFTISVKDDYVAFIKLKDDSFSDVPSVSVCFKISNSLEVQVFHKNVCLPSETFKWILQGKWLKLIHRDNFEANDKAVVCIKHFEPKFLVREDVFPVENGDPIRVPRKIPKLTNDAYPTIFPNQPSYHKLAIPKERKNPQERVQTLLQRDEASFSDWCEHDNIPDFQYFKSEVQKRNVHPFTISVKDDYVAFIKLKDDSFSDVPSVSVCFKISNSLEVQVFHKNVCLPSETFKWILQGKWLKLIHKDNFEANDKAVVCIKHFEPKFLVREDVFPVENGDPIRVPRKIPKLTNDAYPTIFPNQPSYHKLAIPKERKNPQERVQTLLQRDEASFSDWCEHDNIPDFQYFKSEVQKRNVHPFTISVKDDYVAFIKLKDDSFSDVPSVSVCFKISNSLEVQVFHKNVCLPSETFKWILQGKWLKLIHKDNFEANDKAVVCIKHFEPKFLVREDVFPVENGDPIRVPRKIPKLTNDAYPTIFPNQPSYHKLAIPKERKNPQERVQTLLQRDEASFSDWCEHDNIPDFQYFKSEVQKRNVHPFTISVKDDYVAFIKLKDDSFSDVPSVSVCFKISNSLEVQVFHKNVCLPSETFKWILQGKWLKLIHRDNFEANDKAVVCIKHFEPKFLVREDVFPVENGDPIRVPRKIPKLTNDAYPTIFANQPSYHKLAIPKERKNPQERVQTLLQRDEASFSDWCEHDNIPDFQYFKSEVQKRNVHPFTISVKDDYVAFIKLKDDSFSDVPSVSVCFKISNSLEVQVFHKNVCLPSETFKWILQGKWLKLIHRDNLEANDKAVVCIEHFEPKFLVREDVFPVENGDPIRVPRKIPKLTNDAYPTIFPNQPSYHKLAIPKERRNPQERVQTLLQRDEASFSDWCEHDNIPDFQYFKSEVQKRNVHPFTISVKDDYVAFIKLKDDSFSDVPSVSVCFKISNSLEVQVFHKNVCLPSETFKWILQGKWLKLIHRDNLEANDKAVVCIKHFEPKFLVREDVFPVENGDPIRVPRKIPKLTNDAYPTIFPNQPTYHKLAIPKERKNPQERVQTLLQRDEASFSDWCEHDNIPDFQYFKSEVQKRNVHPFTISVKDDYVAFIKLKDDSFSDVPSVSVCFKISNSLEVQVFHKNVCLPSETFKWILQGKWLKLIHRDNFEANDKAVVCIKHFEQKFLVREDVFPVENGDPIRVPRKIPKLTNDAYPTIFPNQPSYHKLAIPKERKNPQERVQTLLQRDEASFSDWCEHDNIPDFQYFKSEVQKRNVHPFTISVKDDYVAFIKLKDDSFSDVPSVSVCFKISNSLEVQVFHKNVCLPSETFKWIYRLQMHRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-