Msep269037.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068376.1:38103901-38104539[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-07 2.8e-05 27.8 0.0 3 38 19 54 17 60 0.90
Sequence Information
- Coding Sequence
- ATGCCTACATTTAAAAAGAAGCCTGCAGGTGAAGGCCGTGGAGAATGGTCTGTAGAAGACATGAAATTAGCGGTGCAAGACGTTttggaaaataaaatatcggtTCGGGCCTCTGCAGAACGGCATAATGTGCCAAGAAATACATTGCAGAGGAAAGTTCGTAGTGTAGAAACTGAATCGCCGGTGGAAATGAAACCTCAGCTAGGGAGATTTAAACCTACTTTCGATAATCTGTATGAAAACGAGCTCGTAAAGCATATGAAAGAATTGGATGTACGACTAATGCCCTTATCAAGGAACGAATTTCTCAAGCTTGCGTATGATCTTGCAGAAAGTTTAAAATTGCCACATAGATTTAATAGGGAGAAACGAATGGCAGGAAAAGATTTTTTTTTCACAGGATTCATGAAAAGACACTCTGAGCTAAGTTACAGAAAACCGCAATCAACAAGTTTAATGCGCTCAGTAGGCTTTAATAAGCCTCAAGTTGAGAGATTTTTCAAACAACTTATGAAACTGCAAGACGAGCGTTGCTTCCGTCCGTCTAGAATCTTTAACGCTGACGAAACGGGGGTGACATGCGTCCACGAAAATGAGATGGTAGTTTCAACAAAAGGAAAGCGCAAGTTGGGAAAATGA
- Protein Sequence
- MPTFKKKPAGEGRGEWSVEDMKLAVQDVLENKISVRASAERHNVPRNTLQRKVRSVETESPVEMKPQLGRFKPTFDNLYENELVKHMKELDVRLMPLSRNEFLKLAYDLAESLKLPHRFNREKRMAGKDFFFTGFMKRHSELSYRKPQSTSLMRSVGFNKPQVERFFKQLMKLQDERCFRPSRIFNADETGVTCVHENEMVVSTKGKRKLGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00945114;
- 90% Identity
- iTF_00945171; iTF_00945057; iTF_00945256; iTF_00945066; iTF_00944822; iTF_00945114; iTF_00945115; iTF_00945178;
- 80% Identity
- -