Msep267417.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068376.1:11688385-11689923[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-07 2.7e-05 27.8 0.0 1 36 15 50 15 57 0.92
Sequence Information
- Coding Sequence
- ATGCCGAGAACGTATCAAAGAAAAACTGAACGCCAGTCGTGGACACCGGACCAGATAAATAACGCTTTAAAAGCTATAAAAGATGGCAGTTCTATACGTAAAGCGGGAAGAGAATTTCATATTCCTGAATCTACACTGCGAGACAAACTGAAAGTTTCTGATGAGAAGTTAATGTGTCCAGCTTTAGGAAGAAAGCCAATTTTTAAAAAAGAAGACGAGGAAGAGCTCACGCAGCATGTAATCACAATGGCCAAACTGTTTTTTGGGCTGACCCCTATAGCACTTAGACGTATAGTGTACCAGTTTGGTACTCtaaaaaatatcaaacacaattttAATGACAGACTTAAACTTACTGGTAAAGACTGGTTATACCTCTTTTTGAAGAGAAACCCAACCGTTAGCCTTCGTCAACCTGAAGGAACTAGTATCAACAGAATCAGTTCGTTCAATAGAGAAGAAgtaacacttttcttcaagaatCTGGAGACGGTATTTTCTAGGCAAAATTTCCCTCCTAACCGAATCTACAATGTTGACGAATCTGGCATTTCAGTTGTTCAAAAAAAGTCAGCCAAAATATTcgcgaagaaagaagaaaaacgagTCGGTGCTCCCACATCAGCAGAGAGACGAAAAAATATTACTATTGTCTGCTGCTTTAGCGCAGCAGGAGACTATATTCCACCTGTGATTATTTATCCTCGTTTGCGGATGGCTGCACATCTCCAGCGCGATGGTCCTATTGGAACTTCTTACCAGTGTTCTCAGAATGGATGGATTAATGAAGATTTATTTCTTGTCTGGCTTAATCATTTCCAAACTAAGGTAAAATCTTCTATCGAAGACCCTGTATTACTCATTTGTGACAATCATCAGAGCCACATTTCCTTAGAAGCCTTCCAGTTCTGCAAGGAAAATCATATTGTAATGGTTTCTTTACCACCCCATACATCAAATCGCTTGCAGCCATTAGATTTAACTTTTTTTGGCCCGCTTAAGAGTGCTCTGTCAAGAGAATATGATTTGTTTATGTTTAGTCATGCACATAGACGTACCGTAGCTGACATACCTCAGTTATTCAACAAAGCCTACCTAAAGGTAGCAACAATGGACAAAGCACTTTCTGGCTTCAAAGCTCCTGGGATTGTTCCTTTTAATCCAGACAAATTCTCAGCAGACGATTTTGCACCAGCAGAAAAATGTAAAGAGTTGATTGTTGAGGCAAATACAGAAAACGAATCTGTTCATTCAACCCCTAGAAGTTTTGGATCATCTTCTGTAGCCTTAGTTCCAGGGAGTGCAGAATCGTTAAATGCGGGTCCATCAAACGTTCACGTGGCCGATATAGCACCAATACCGAAACGAAATTTGGTTGACAAAGAAAAGAAAGCCTGTGCAAGAAAACAACATTCGCAGATACTGACGAGCACACCCCTGAAAGCGGAACTTGAGGAAAAAAAGAGGAAGAGACTTGAAAAACATGAAAAAGGATTCAAAGCGAAAAGAAAGCTTGACCTAAATGGAGAAAAAAACTAG
- Protein Sequence
- MPRTYQRKTERQSWTPDQINNALKAIKDGSSIRKAGREFHIPESTLRDKLKVSDEKLMCPALGRKPIFKKEDEEELTQHVITMAKLFFGLTPIALRRIVYQFGTLKNIKHNFNDRLKLTGKDWLYLFLKRNPTVSLRQPEGTSINRISSFNREEVTLFFKNLETVFSRQNFPPNRIYNVDESGISVVQKKSAKIFAKKEEKRVGAPTSAERRKNITIVCCFSAAGDYIPPVIIYPRLRMAAHLQRDGPIGTSYQCSQNGWINEDLFLVWLNHFQTKVKSSIEDPVLLICDNHQSHISLEAFQFCKENHIVMVSLPPHTSNRLQPLDLTFFGPLKSALSREYDLFMFSHAHRRTVADIPQLFNKAYLKVATMDKALSGFKAPGIVPFNPDKFSADDFAPAEKCKELIVEANTENESVHSTPRSFGSSSVALVPGSAESLNAGPSNVHVADIAPIPKRNLVDKEKKACARKQHSQILTSTPLKAELEEKKRKRLEKHEKGFKAKRKLDLNGEKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00944954; iTF_00944899; iTF_00944838; iTF_00944980; iTF_00944874; iTF_00944860; iTF_00944898; iTF_00944842; iTF_00944844; iTF_00944861;
- 90% Identity
- iTF_00944898;
- 80% Identity
- -