Msep081685.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- clz9
- Assembly
- GCA_034769895.1
- Location
- CM068368.1:336528844-336530874[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-08 7.5e-06 29.6 0.0 3 40 18 55 16 61 0.87
Sequence Information
- Coding Sequence
- ATGGTACGTACATATGTGCGTAAAAGTAATAGAGGCAGTGCGTACAATCAAGAAATGTTACAAATGGCTATTGAATTAGTAAAAACAGGTCAGTTAACAATATACAGAGCCAGCAAAACATACAACATTCCAAAAAATACATTAGCCGATCATGTTAAGGGTAGAAGAGGGCAGAAAAGTAATTCTTATGGCAGACCTACGGATATTCGTTTGCAAGAAGAAACAGTCCTTGCTGATGGGATTCGTACTATGGAGAAATGGGGATTTGGCCTGTCAAGGAGAGAGGTATTGAATGTTGTTGCTGACTACGTTAGATGCAATAATATTAAAACGCAATTTAAAAATGGTGTTCCTGGAGAGGACTGGTTTTTAAACTTTAAACGTAGGCACAAACTTTCCATAAAAACTCCACAAACTGTGGAATATGCGAGAAAAAAATGTTTAGATCCATTCGTTATATATGAATATTTTGATTTACTTGAAAAAACATTACAGGATCTGAAGTTGGAAAACAAACCATCTCAGATATGGAATCTGGATGAAAGTAGCTTTTGTTCGGACCCTTCAAAGACTAAAATTGTAGGACAACGAGAAATTCCTGCAACTCGCACCACTAGCGGCCCAGGCAAAGACAACACCACAGTTGTAATGTATTGCAGTGCAAGTGGGGCCAAAGCACcaccattaattatttttaaaggaaAAAACATGTGGGATCAGTGGCTTGCACCAGCAGGTACTGAGTATCCGCGTACCATGTATGCAGCTACAAAAAAGGGCTGGATGGAAAGTACAGTATTTAAAAACTACTTTCAGAAATGTATTTTAACGTCAATTGGGGAGGAACGCCCAGTTTTGATTATTTATGATGGTCATACAACACACGTTGGGTTAGATGTAATCCAAATTGCAAAGAATAATGATGTTACCATATTAAAACTTCCACCACACACTAGCCACTTGTTGCAGCCCTTAGATCTATCTGTTTTTAAATCGCTTAAGTCACGTTGGGATGCTAAATTGGTAGAATGGCAAAGAAGAAATGTGGGTACTAAAATTCCCAAAtctatattttcaaaattaattggTGAAATCTGGACTGAAACAACACCAGAATTACTTGCCAGTGGTTTCGTCAAAGCTGGAATTTGCCCATTTCATAAAAATGTTATACCAAAAGATAGATTTGATCCTCAAGCTTTGAAGCGATGGGAAAGTAGCAAGGCTGAAGGTTTCCTCCCAGTTGAACCAGTAGCTGCTACGGTAGATGTTGAAACATTTGCTGAAAATAATACATTCAATCAAGGAGGCAACTGTAGTAAAATTTCAGATGATGTGCCTCAGATACTAAATATGCCCAGCACGCCTGTTGCAAATACGCAAACTCATAAGACGTCTTTTGAAGAGCTGCTATTGCAGTCAACTAAATGGGACAAGCCTTTAGGTCAACAGAAACGGAAACGAGTTTGCACAGGAGTTGAACAGATTATTAtggaagaaaatattaaaaataaacctcAGGCTTCCAAAAAGCAACTAAAATCATCAAGCAAGAGAAAAGTACAAACATCTAAAAAAACCGAGATTAGTAGTTCAGACGAAAGCGATACTGAAACATGGAAAAGTGATGAGAGTGAAAATTGTTTTTCAGAATTTAATGACTCGGAAGATGATGACTTAGAAAATATTATGAACCCGAATGAACATCAGAATAAATCTGTGGAACCAAAACAGTcagaaaacaacaaacaaaatgatgtaaacttatTGGATATCCACGAAGGGGATTTTGTTCTGGCGAAATTTCTGGGGAAAAAGAAAATTTATACATATGTGTGTTGTATTACTGAAATAATATGTGATGAAGAAGCTGAAGTTACTTGTTTGAGAAAATTAAAAAATCCGTTTGAGTTTAGGATAAAAGAAAGTGATACATGTTCAATAATGTTGTGTGAAATTTTAGAAAACTTGAAACGCCAAAAATTGTTAAAGTTGGTAAATACGATAAATATGTATTTAGTAAAGCAGTGA
- Protein Sequence
- MVRTYVRKSNRGSAYNQEMLQMAIELVKTGQLTIYRASKTYNIPKNTLADHVKGRRGQKSNSYGRPTDIRLQEETVLADGIRTMEKWGFGLSRREVLNVVADYVRCNNIKTQFKNGVPGEDWFLNFKRRHKLSIKTPQTVEYARKKCLDPFVIYEYFDLLEKTLQDLKLENKPSQIWNLDESSFCSDPSKTKIVGQREIPATRTTSGPGKDNTTVVMYCSASGAKAPPLIIFKGKNMWDQWLAPAGTEYPRTMYAATKKGWMESTVFKNYFQKCILTSIGEERPVLIIYDGHTTHVGLDVIQIAKNNDVTILKLPPHTSHLLQPLDLSVFKSLKSRWDAKLVEWQRRNVGTKIPKSIFSKLIGEIWTETTPELLASGFVKAGICPFHKNVIPKDRFDPQALKRWESSKAEGFLPVEPVAATVDVETFAENNTFNQGGNCSKISDDVPQILNMPSTPVANTQTHKTSFEELLLQSTKWDKPLGQQKRKRVCTGVEQIIMEENIKNKPQASKKQLKSSSKRKVQTSKKTEISSSDESDTETWKSDESENCFSEFNDSEDDDLENIMNPNEHQNKSVEPKQSENNKQNDVNLLDIHEGDFVLAKFLGKKKIYTYVCCITEIICDEEAEVTCLRKLKNPFEFRIKESDTCSIMLCEILENLKRQKLLKLVNTINMYLVKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00945122; iTF_00944994; iTF_00944618; iTF_00944599; iTF_00944578; iTF_00944458; iTF_00944620; iTF_00944523; iTF_00944559; iTF_00944622;
- 90% Identity
- iTF_00945122;
- 80% Identity
- -