Msep099576.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068368.1:742633297-742635063[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-08 6.3e-06 29.8 0.0 3 41 17 55 15 59 0.93
Sequence Information
- Coding Sequence
- ATGGTttctaattataagaaaaaatcgaATCGACAATCCTGGTCGAGTGAAGACATGCAGAAGGCGATAGAAGCGGTGAATGATAAGAGGATGGGATGGAAAAAAGCATCTATTACGTTCAACGTTCCTCAGGCGACATTGCGGAGACGCGCTCAGGGAAAGAATATTCATGCCCGTGGTGTAACAAAATGTCTCGGTCGCTTCAAGAAATCACTCAGTGGTGATCTGGAACAAAGATTAATCACACATATATTAGACTTAGAGTCACGACTTTTTGGCCTGACTACCTATGACTTGAGGGAACTTGCATACAAACTTGCCGAGCGCAGTGGATGTGAacatcaatttaataaaaataaaaaactggctAGTAGGCAATGGGTTCATAGCTTTATTTCTCGGCATCCGAACATATCCTTAAGAGTTCCTGAAGCTACCTCAGCTGCAAGAGCCCAAGCCTTCAATAGACCTCAGGttcagaattattttaaaaagttggAAGAAACAGTTCAAACTAATAACATACAggcaacaatgatttttaacatggATGAGACTAAACTTACAACTGTACAAAAAACTCAAAAAATAATCGCCAAGAGAGGTAAAAAGCAAGTTGGTGCAATTACTAGTGCCGAAAGGGGTATTCATACTACAGGAGTGGCGTGTGTGAGCAGCGCTGGAACTTTTATTCCACCAGCATTGATTTTTCCGAGGAAAAAATTCAATCAAGATTTGTATGATGGAGCTCCACCAGGTACCCTCCCATTGTATAATGAATCAGCATATATGACTGGAGACCTCTTTCTTAAATGGATTAAACACTTCGTGAAGTTTGTAAGACCTACGAATGAAAATAAGGCGTTATTAATTTTAGATGGCCACGCAAGCCACAAAAACCTGGATTCTCTTGAATTTGCTAAAAAAAATCACGTCATTCTGTTTTGTCTCCCAGCCCATTGCACGCACCGACTCCAGCCCCTAGATGTCGCATTTTTTGGACCTTTAGCAACCTACTATGACCAAGAAGTCACGACATGGCTGAAGGCACATCCAGGGAGAACTGTGTCAATATACCAAATCTCTTCATTATTTACAAGAGCCTACAATAAAGCTGCTACCGTCGGAATAGCACTTAGTGGATTTAAAGCCACCGGCATTTCTCCATTAAACCCCAATATATTCCCTGACCACTTATATCTACCCAGCGCTGCTACTGATATCCCTGAAGATGACACAATTTACGAGAAGCAGTCAAAAAATGAGAAAAAAATGCTCACTAACCCATTAAATTGCGATGCTGTTGCTTCAACTTCTGGTAACGTTTTCGTAGAAGCTTATTCCGAaaatgagaaaactgatgtgtctGAATTGCTGAACGAATTGTCTCCAGTTCCGATAGCAAGTGTATCATCATCATCACGTCACAAGAAGAAAAATACATATCAAAGTGTTCTCACCGAGAGtccgtttttaaatgaattaaaagaaaaagaagctgaaaagaaagataaagaaagaagaaagagtgAGAGGGCTAAAGTTAAAAGACGTATTGCTATAGACTCTTCCGATGATGAACCAACATTTGATAATAACGATACTGATTCTGATGTTGGTTGTTTGTATTGCAACGAACTGTTCAGCCAATCTAGACACCGAGAGCAATGGATCCAGTGCCAGCAATGTCGTCAGTGGGCTCATGCTGAGTGTGCTGGAGTAACTAAAAAGATCAAACAGTTCATTTGTGAAGCGTGCCGGGACTAG
- Protein Sequence
- MVSNYKKKSNRQSWSSEDMQKAIEAVNDKRMGWKKASITFNVPQATLRRRAQGKNIHARGVTKCLGRFKKSLSGDLEQRLITHILDLESRLFGLTTYDLRELAYKLAERSGCEHQFNKNKKLASRQWVHSFISRHPNISLRVPEATSAARAQAFNRPQVQNYFKKLEETVQTNNIQATMIFNMDETKLTTVQKTQKIIAKRGKKQVGAITSAERGIHTTGVACVSSAGTFIPPALIFPRKKFNQDLYDGAPPGTLPLYNESAYMTGDLFLKWIKHFVKFVRPTNENKALLILDGHASHKNLDSLEFAKKNHVILFCLPAHCTHRLQPLDVAFFGPLATYYDQEVTTWLKAHPGRTVSIYQISSLFTRAYNKAATVGIALSGFKATGISPLNPNIFPDHLYLPSAATDIPEDDTIYEKQSKNEKKMLTNPLNCDAVASTSGNVFVEAYSENEKTDVSELLNELSPVPIASVSSSSRHKKKNTYQSVLTESPFLNELKEKEAEKKDKERRKSERAKVKRRIAIDSSDDEPTFDNNDTDSDVGCLYCNELFSQSRHREQWIQCQQCRQWAHAECAGVTKKIKQFICEACRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00944738; iTF_00945164; iTF_00945165; iTF_00944335; iTF_00944336; iTF_00944736; iTF_00944706; iTF_01242692; iTF_01242693; iTF_01242694; iTF_01242695; iTF_01242696; iTF_01242697; iTF_01242698; iTF_01242699; iTF_01242700; iTF_01242701; iTF_01242702; iTF_01242703; iTF_01242704; iTF_01242705; iTF_00944648; iTF_00944680; iTF_00944683; iTF_01240473; iTF_00945184; iTF_00945183;
- 90% Identity
- iTF_00944738; iTF_00944736; iTF_00945165; iTF_00945164; iTF_00944336; iTF_00944335; iTF_00945184; iTF_00945183;
- 80% Identity
- iTF_00944738; iTF_00944736;