Msep189388.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068372.1:259108431-259108808[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-08 2.9e-06 30.9 0.0 5 39 1 35 1 40 0.92
Sequence Information
- Coding Sequence
- ATGAAAACGGCAATAAACGAAGTTATGTCAAATAGAATGTCACAAAGACAAGCATCTGAGGCTTTTTGTGTGCCAAAAACCACGCTAGAGAACAGACTGAGAGCCATTCAAGCAGGTAAAACTGTAAATCTAACGCCTCAGATGGGCAGATATAAAAAGACATTTGACGAGAGCATGGAAAAACGGCTCGTTTATTATATTAAAGATTTGGACAACAAATTCATGCCTCTCAGTAGGAAAGAATTTTTGAAATTAACGTTTGATTTGGCTGAGCATTTACAGGTACCTCACCAATTTAATAGGAATCATAAAGTTGCCGGGAAGCAGTTTTATTATGACTTTATGGCACGTCATCCTGAACTGTCCCTGAGAATATAA
- Protein Sequence
- MKTAINEVMSNRMSQRQASEAFCVPKTTLENRLRAIQAGKTVNLTPQMGRYKKTFDESMEKRLVYYIKDLDNKFMPLSRKEFLKLTFDLAEHLQVPHQFNRNHKVAGKQFYYDFMARHPELSLRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00944354; iTF_00945059; iTF_00945106; iTF_00944444; iTF_00944764; iTF_00944520; iTF_00945131; iTF_00944558; iTF_00944776; iTF_00945120;
- 90% Identity
- iTF_00944764;
- 80% Identity
- -