Msep264237.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068375.1:377983702-377984148[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-08 3.7e-06 30.6 0.0 3 41 17 55 15 58 0.89
Sequence Information
- Coding Sequence
- ATGGTTTACAATTACAAGCGCAAGGGAGAAAGGCAATCGTGGGATTCAGGTAACATGCAAAAAGCAATAGAGGCAGTGAAGGACGGCATGGCTTTCTTAACCGCTGCAACCACATATAATGTTCCTAGGAATACTTTGAAGAGGAGAGTGTTGAACCAAAATATGCGTGCTACAGGCAACAAAAAGGAATTTGGAGGTTTTAAGTCCGTATTTACTagggaacaagaacaggaaatctaCAACCATCTACTAATGTTGGAGACGAGATTTTTCGGTATGACTATTAAGGATCTGCAAAGTTCAGCATTTGGACTTGCTGAGAAGTACAACCTTCCTCATAATTTTAATAAAGATACCAGGATGGCTGGAAAAGGGTGGATCGCTGGTTTCCGGAAACGCCATCCAAAGTTAACGTTAAGGTCGCCTGAGCCAACTTCTTCTTGTTGA
- Protein Sequence
- MVYNYKRKGERQSWDSGNMQKAIEAVKDGMAFLTAATTYNVPRNTLKRRVLNQNMRATGNKKEFGGFKSVFTREQEQEIYNHLLMLETRFFGMTIKDLQSSAFGLAEKYNLPHNFNKDTRMAGKGWIAGFRKRHPKLTLRSPEPTSSC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00944676; iTF_00944677; iTF_00944649; iTF_00065837; iTF_00944664; iTF_01444677;
- 90% Identity
- iTF_00944676;
- 80% Identity
- -