Msep225966.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068374.1:75656490-75658351[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-09 1.1e-06 32.3 0.0 1 38 12 49 12 55 0.95
Sequence Information
- Coding Sequence
- ATGTCTGACAACGTGAAGAAGAGGGGATTATGGACTGAAGAAGCCATGTCTAAGGCAGTGAGCGGAGTGAAGAGTGGCAAGTTCTCAGTTCAAGGGGCAAGTAACAAGTTTGAAGTACCTAGGCGTACTTTACGCCGTTATTTGGAGAAAGATGACCCCTCAAAGAAGTCAAAGTTAGGTGGAAAACCCACCTTAACGCCTGAACAAGAAAAACAGCTATGCCAGAGAATTTTCCGTTTGTCTTCTGTGGGTTACCCATTGACTCCTAACATCCTTAAACTCAACGTTTTTCGTTTTTGTCAAGAAAACAACATCTCAAATCGTTTTAAAGAGACAGCTGGTCGTAAGTGGTTCGACAGTTTTTTGAAGAGGAACCCTGACGTTGCACGACGGAAAGCTCAAAGGCTGAACCCAGCCCGGGCTCAGAAATTAAATAAGTTCATAGTTGCTGATCACTTTGCGAAACTAAAAGAAATCTTCACCAAGTACGATTTTTTCAAATTCCCAGAACGAGTTTTCAATATGGATGAAAAAGGATGCCGCCTCCACCTTCATAAGGATCCAAGAGTTTTAACCCAAAAGGGGGCTTCACGAGTTCATATTGTGGGCAAAGAACACGGAGAAAGCGTTACAGTTGTGGCTTGTGGGAACGCTGTGGGTTCGATGATCCCTCCAATGATTTTATACTCAGGAGTGAGAAAAAATAAAGCCTGGGAGAAAGGTCTACCTGCTGGATCATCGACTCAAATGACTCCAAAAGGGAGCATGACAACTCAAACTTTTGTTGATTTTCTGCAACATTTTGCCAGATTTAAACCCAACGGACATTGCCTTCTGATTTTTGACGGAGCCAAGGCACACCTCGATTACAAAATTTGTGAAGAGGCTGAAAAGCATGACATTGCCCTCTATTGCTTGCCATCTAATACAACACATGAACTGCAACCATTGGACAAAAGTTGCTTCAGGAGCTTTGAAACTTTTTGGGACCAAGAAGTTCTGAATTTTTTCGACTCACACCGGGACGAGAATGATATCACTCGGTTGAACTTTCCTGATGTGTTCACCCCAGCATGGGGCAGATCAATGACACAATCTAATATGACTAGTGGCTTCAGAGCCACAGGTATTTACCCGCTCAACCCGAATGTGATCCCAGAAGATGCGTTTGCCCCTAGTACTGTGACTGAACTCCCGCCTCCTGAATTGAACAACCAACAAAGCTCAGGCTTGCCTGACAACAATCAGCGAGCACCAGCACGTTGTCACATTCTCGATCTTGATTCGTCATCGTCGTCTGATCCAGATGATCCTCTTGAAGTTGATGCTCTGTGTATGGATAGAGATGACTGTCCGCCAGGGAATGAATCATCCAGCAGACAATCATCTTCCAGCTTTTATGAACTTCTGGCAACGCCAAAAAGGAAGAGAAAATCAACGAGGGTCATAAGACCAGCCATGAATTCGCGTGGGATCGAGCTGAAAAAAAATCTTTTCCAGCCAAAAGAAGCTCAGCCGTCTAAACCGAAAAAGGGACCAACCACGAAACAGCCGTTGACGAACAAGCCAAAGAACAAACAGCAGCAACCCAGCAAAGAGACTAATAAAACCACAGAAGCTGAAAGTTGGTACTGCAGTATTTCTCAGGAGTACGAAGTCAAGGACATGCGACTCTGCGTAGTCTGCAGGAATTTCTACCACGAAGAGTGTGTTGGCCTCACTGCTGCTGACAAAGACATTTTTATTTGTCCCAATTGCGACCAGTAA
- Protein Sequence
- MSDNVKKRGLWTEEAMSKAVSGVKSGKFSVQGASNKFEVPRRTLRRYLEKDDPSKKSKLGGKPTLTPEQEKQLCQRIFRLSSVGYPLTPNILKLNVFRFCQENNISNRFKETAGRKWFDSFLKRNPDVARRKAQRLNPARAQKLNKFIVADHFAKLKEIFTKYDFFKFPERVFNMDEKGCRLHLHKDPRVLTQKGASRVHIVGKEHGESVTVVACGNAVGSMIPPMILYSGVRKNKAWEKGLPAGSSTQMTPKGSMTTQTFVDFLQHFARFKPNGHCLLIFDGAKAHLDYKICEEAEKHDIALYCLPSNTTHELQPLDKSCFRSFETFWDQEVLNFFDSHRDENDITRLNFPDVFTPAWGRSMTQSNMTSGFRATGIYPLNPNVIPEDAFAPSTVTELPPPELNNQQSSGLPDNNQRAPARCHILDLDSSSSSDPDDPLEVDALCMDRDDCPPGNESSSRQSSSSFYELLATPKRKRKSTRVIRPAMNSRGIELKKNLFQPKEAQPSKPKKGPTTKQPLTNKPKNKQQQPSKETNKTTEAESWYCSISQEYEVKDMRLCVVCRNFYHEECVGLTAADKDIFICPNCDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00945030;
- 90% Identity
- iTF_00944494; iTF_00945030; iTF_00944489; iTF_00944490; iTF_00944491; iTF_00944492; iTF_00944493; iTF_00944528;
- 80% Identity
- -