Msep181947.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068372.1:81643343-81645201[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-09 8.4e-07 32.6 0.1 2 42 18 58 17 61 0.90
Sequence Information
- Coding Sequence
- ATGCCAACTGAATACAAAAGGAAGCCTGGATCAACTCGTGGTAACTGGAGTGAGCAAAGCTTAAAAGAAGCTATTACCAGAATAGAAGCTGGGGAAATCGGCGTAAACGAGGCAGCCAGGTACTATGGTATACCGTCTAGGACACTTCGCCGAAGGAAAACGTCAGGTAACCACAATAAACTTTCTCTTGGACCTCAAGGTGTGCTGGGTATAGGCAACGAAAAACGTATGGTAAGGCATATACAGCGGCTGGAACAATCTGGGTTCGCTCCAAACAGAGACACTGTTCGTTCTTTAGCATACAAGTTTGGAGAGGAACTAGGACTGGGTCACACATTTAATCAAGAAACTCAAATGGCTGGGTACGATTGGCTGAACAGTTTTTTTAAGAGGAATCCAGAATTAACAATTCGTCAGGCTGAGGGCCTGTCAGTTGCTAGAGCTAATGGAATGAACCGAGAAGAGGTGACCAGATTCTTTGATCTCCTAAACAAAGTATTTGAAGACAATCAGCTTTTTAGCAGCCCAGGCAatatttttaacatggatgaaacggGTTGCCAATTAAATAATTCATGTGGAAAAGTAGTGGCTTCAAAAGGTAGTAAGGACGTACACACATTGACTTCTGGCGAGAAAGGTGAGAATGTTTCGGTCATTGCTTGTTGTAATGCTGAAGGTGTATTTCTTCCTCCTGTTCTTATATTCAAAGGCGTTCGAGAAAACGAAAACTTCGGCAGAGGCTTGCCACCAGGTTCAAAGGTATTTTTAAACCCCAAGTCTTCATACATAACCTCCGATCTGTTTTACAGATGGCTGCGGGAGCATTTTGTTCCTCGGAAACCTCCTGGCAAAACTGTTCTTATTCTGGATGGACATTCTTCCCATACTAATTGTTATGAGATGTTAAACTTTGCTGACAGTAATGACATTATTGTTGTATGCTTGCCAAGACATACAACCCAGGCTCTTCAACCGCTGGATAGAACTTTTTTCAAACCTTTCAAAAATATTTCAAACAAGAAGCACAAAAACATTTGGTCGAAAATGAAAGAAAGGAGATTAAAAAGATTCATGCTGGCTACCGGCATATTTCCTCTAGACTCCGATGCAGTGCCAAACCATTTCTTTCAAATTTCAGATGGATCTCGACCACAAGAGTCATCATCGACCCTTCCAGATCTCACTTCAAATACACCTACTAACTTAGAGAGAGAAAATTTGGAAGTAATGCCCTCTCATAAGTTAATCGATTTGCCTGTTTCTTCAAAAACGAATTCTCTTCCCGAGCTATCTGTTCCAGATGACTCCCACGAAGCCTTACTCAATCTCCCAAGCACATCTAAAGAAACGCCTACTAAAACCCTCATGAAGCTGAGCCCAATTCCCCGATTACCTAAACCGAAAGTACACAATTGCAGAAGAAAGCAGTCAGCTAAGATATTAAACCTATCAGCAAATAATGGAAAAAGGCAACTTGTTTTAGAAGACACTTACAATCAGGAGGAAAATGTAAGAAATCATCCAAAGAAAACCAAAAAAGAACGGGTAAGAGATAATGTAGCTACTGCTGCTAACCCTTCTGTTTCCATAGACACAGACAACCCAAACGATAACTGCATTGAATGTTTGGAAAACTACTGGCAAACTACGTCAAAAGTGCCGTGGGTTCAGTGCGTTATTTGCAAAAATTGGATGCATGAGAACTGCACTATGTACGGTGTCATGTGCAATTTGTGTGGACGTGAAGAGAAAAGGAAATCTGTGGCTAAACTTAAAAATAAGAAACATTAA
- Protein Sequence
- MPTEYKRKPGSTRGNWSEQSLKEAITRIEAGEIGVNEAARYYGIPSRTLRRRKTSGNHNKLSLGPQGVLGIGNEKRMVRHIQRLEQSGFAPNRDTVRSLAYKFGEELGLGHTFNQETQMAGYDWLNSFFKRNPELTIRQAEGLSVARANGMNREEVTRFFDLLNKVFEDNQLFSSPGNIFNMDETGCQLNNSCGKVVASKGSKDVHTLTSGEKGENVSVIACCNAEGVFLPPVLIFKGVRENENFGRGLPPGSKVFLNPKSSYITSDLFYRWLREHFVPRKPPGKTVLILDGHSSHTNCYEMLNFADSNDIIVVCLPRHTTQALQPLDRTFFKPFKNISNKKHKNIWSKMKERRLKRFMLATGIFPLDSDAVPNHFFQISDGSRPQESSSTLPDLTSNTPTNLERENLEVMPSHKLIDLPVSSKTNSLPELSVPDDSHEALLNLPSTSKETPTKTLMKLSPIPRLPKPKVHNCRRKQSAKILNLSANNGKRQLVLEDTYNQEENVRNHPKKTKKERVRDNVATAANPSVSIDTDNPNDNCIECLENYWQTTSKVPWVQCVICKNWMHENCTMYGVMCNLCGREEKRKSVAKLKNKKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00944425; iTF_00944426; iTF_00944427; iTF_00944428; iTF_00944460; iTF_00943984; iTF_00944465; iTF_00944466; iTF_00944468; iTF_00944470; iTF_00944471; iTF_00944474; iTF_00944338;
- 90% Identity
- -
- 80% Identity
- -