Msep141570.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068370.1:171056782-171057135[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-09 2e-07 34.6 0.0 1 37 9 46 9 49 0.93
Sequence Information
- Coding Sequence
- ATGGGTAAAATTCGTGGAAAATGGGATGAAACGAATATGAAGGAGGCAATTGACAGAGTAATTTCAAAAGAATTGACAATAAGAGATGCCAGTGCTAGATATTCTGTACCAAAGAGCACGCTAGCAGATCGAGTTAAAATAATCGCAGAAGGGGGTGAAGTAATAGCCAAGCCTTGTACAGAGAACAGAGGCACTTTCCAAAGAACATTTGAGGaaaatcatgaaaaaatattatataatcATGTAAAGGCTTTGGACAGTCAGCTGATGCCGCTAAGCAAAGTCGAATTTTTGAAACTAGCCTACCAATTagcttgtgacgattttaaatgtattaaaaatcgcacagattaa
- Protein Sequence
- MGKIRGKWDETNMKEAIDRVISKELTIRDASARYSVPKSTLADRVKIIAEGGEVIAKPCTENRGTFQRTFEENHEKILYNHVKALDSQLMPLSKVEFLKLAYQLACDDFKCIKNRTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00944611; iTF_00944136; iTF_00944138; iTF_00944234; iTF_00944237;
- 90% Identity
- iTF_00944138;
- 80% Identity
- -