Msep269899.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068376.1:52165659-52166021[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-10 6.7e-08 36.1 0.0 1 38 8 45 8 49 0.91
Sequence Information
- Coding Sequence
- ATGCCGCCCCGAAAAACATGGGATCCTGATGCCATGGTGAAAGCTATCACTGCTGTGAGAGACAAGGAAATGGGGTATAAAGCAGCTGCGAAGGCTTATGATGTTCCAAGGGCTACCTTGAAAGACTACGTCAAATCTGACCTCACACCTGAGGAATGTGTGAGGTCAAAATTTGGAAGGAAACCAGTTTTTTCCGCTGAGCTCGAGGAAAGTCTTGTTGAACACTGTTTGGATATGGAGCAGCATTACTATGGACTGACTATGTCTGACCTGAGACTATTGGCTTACCAGTTGGCTATTAAAAACCAAGTCCCTAATCCTTTCTCGAGTGAAGCAAAGGCTGCTGGCAAAAAGTGGGATTGA
- Protein Sequence
- MPPRKTWDPDAMVKAITAVRDKEMGYKAAAKAYDVPRATLKDYVKSDLTPEECVRSKFGRKPVFSAELEESLVEHCLDMEQHYYGLTMSDLRLLAYQLAIKNQVPNPFSSEAKAAGKKWD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00945076; iTF_00944824; iTF_00944789; iTF_00944825; iTF_00944826; iTF_00944828;
- 90% Identity
- iTF_00944824;
- 80% Identity
- -