Msep040720.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068367.1:889617917-889619872[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-10 1.9e-08 37.9 0.1 1 44 18 60 18 61 0.93
Sequence Information
- Coding Sequence
- ATGCCAAGAAGGTATGAAAGACAATACGGTAGCCACAAATATGCGGATTACACACAGGAAAATTTGGATGAAGCAATGCAAAAAATTAGAAGTGGGGAAATGTCAAATAGAAAAGCtgcaaaacattataaaatatctatAAGTACCATCAAAAGAAGACTTAAGGGTGTGCACTTGAAGCGTCCTGGAGGTCAAACAATCCTTGGCGAAGAAACAGAAAAAATGTTTGCTGACCATGTAGTGACATGTTCCTTATTTGGATATCCAATGACTGGATTTGACATGCGAGTGCTTGTGAAGTCATATCTTGACAGGAATGGACTGACTATTAGCTCATTTAAAAACAATCTGCCCGGCAAAGAATGGTACAAAAGTTTTATGTCCAGATACCGAGACTTAACCGAAAGAATATCATCTAATATTAAAAAGCAGAGGGCAAAAGTTTCAACTTACTCCATTAATGAGTACTTCGACTATCTAGAACAGGAGATTGTAAATGTACCTCCCTCAAACATTTTCAACTTCGATGAGACCAATTTAACAGACGACCCTGGAAACCTAAAGATTGTTACCAAACGAGGAGTAAAATATCCCGAACGGATTTTAAGCTCAACAAAATCTTCTACATCTATCATGATGTGTGGGAATGCAGAGGGGACAATGCTTCCGCCGTACGTCGTCTACAAGTCCAAGGAACTGTTGACTACCTGGACTGAAGGTGGTCCTTCAGGATGTCGTTACAACCGAACTTCGTCAGGGTGGTTTGATAACGTGACGTTCGATGATTGGTTCAACACTGTGGTGATACCACACTTGAAAAAGCTAAGTGGAACCAAAGTTGTCATCGGAGACAATTTGTCTAGCCACCTGAATTTAAACATCATTGAACTGTGTCAGAAACATGACATAAAGTTTATATGTTTACCACCAAATTCCTCCCATATAAGTCAACCTCTTGACGTTGCATATTTTCGCTCCATGAAAGGAGCATGGAGGAGGATTTTAACAGACTACAAGGTTAAGACAAACAAGTCCCCTGTTCCAAAAAGTGATTTCCCCAAGCTTCTTAAACAGCTTGTAACTGAACTTCACCACGAAGGCAGTAACTCCTTAGTAAATGGTTTTCAGAAAACAGGTATTTACCCTGTAAACAGGAAAGAAATTTTGGACAGACTTCCTACAAAGGATagcttgccaaacaaaaaaaaaggCCCTCATGATGGCGAAGAACTTAAACAAAGAGTAAGTGATTCTGTACTTGAGTTTTTGCACAAAAAACGTTATGGTGAAGGAAATGAGAAAGTAGGAAGGAAGAAAAAGGTACAGGTTAAGCCTGGAAAAAGTGTGAGCGCAGATGATTTCAAAGGTGAAAACAATAAGGTACCAGAAGCCCAACCTTCTACATCTACCGGTACTTTCACATCACCACCAATAAAGGCAACTGCAAAAAGAAAGAAAAAGGCAGTGAAAAGAGATTCAGACACCAGCAGCGAAAGTGAACCAGAGAGTGAATATTCAGTGTACAGTGAGTTCGAAGAAGAAGACTTTGACGATATTGATTTTCTAATAGAAAAGCAACAAGACAAGGGAAATAGCAAGAAGATAGAAGTAAAAGGAAGTagcaagaagaaagagaatcttaAAAAAAAAGATAGTACCAGTGCTTACGAAAAAGGCTCTTATGTCTTGGTAATGTATGAAGGAGAGTTTTTCCCGGGAGTGATAACAGATATAGGTACCGGTAATTCAGGAGAATACTACAAAATCAGTACAATGACCATGAGTGGTCCCAGTAATTGGAAATGGCCAGATAAAATTGATGAATGCTGGTACAACAGaacagaaataaaagaaaaaattgcaGCCCCCACACCCATTACCGCCAGAGGATCTTTTGCTGTTCCAGAGGTAGAAAAGTGGCGTTTCATGGACAAGGACATCAAGTTAAATGCTTGA
- Protein Sequence
- MPRRYERQYGSHKYADYTQENLDEAMQKIRSGEMSNRKAAKHYKISISTIKRRLKGVHLKRPGGQTILGEETEKMFADHVVTCSLFGYPMTGFDMRVLVKSYLDRNGLTISSFKNNLPGKEWYKSFMSRYRDLTERISSNIKKQRAKVSTYSINEYFDYLEQEIVNVPPSNIFNFDETNLTDDPGNLKIVTKRGVKYPERILSSTKSSTSIMMCGNAEGTMLPPYVVYKSKELLTTWTEGGPSGCRYNRTSSGWFDNVTFDDWFNTVVIPHLKKLSGTKVVIGDNLSSHLNLNIIELCQKHDIKFICLPPNSSHISQPLDVAYFRSMKGAWRRILTDYKVKTNKSPVPKSDFPKLLKQLVTELHHEGSNSLVNGFQKTGIYPVNRKEILDRLPTKDSLPNKKKGPHDGEELKQRVSDSVLEFLHKKRYGEGNEKVGRKKKVQVKPGKSVSADDFKGENNKVPEAQPSTSTGTFTSPPIKATAKRKKKAVKRDSDTSSESEPESEYSVYSEFEEEDFDDIDFLIEKQQDKGNSKKIEVKGSSKKKENLKKKDSTSAYEKGSYVLVMYEGEFFPGVITDIGTGNSGEYYKISTMTMSGPSNWKWPDKIDECWYNRTEIKEKIAAPTPITARGSFAVPEVEKWRFMDKDIKLNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00943748; iTF_00943754; iTF_00944083; iTF_00943921; iTF_00943765; iTF_00943639;
- 90% Identity
- iTF_00943921;
- 80% Identity
- -