Msep213146.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068373.1:316328588-316329325[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-12 1.6e-09 41.4 0.0 1 41 18 58 18 61 0.94
Sequence Information
- Coding Sequence
- ATGCCACAAAATTATATCAGAAAGGTTGGATCCAGACAATATCGGAACTTCACAGATGATCAGATGGAAAAGGCGCTTAAGGGTGTACAAGAAGAAGGTCTAGCTATCAGGAAAGCAGCTGAGAAGTATGGTGTCAGTAAAGACTCTCTTTACCGCCGATTAAAAGGTAAACACACAGGTAAATATGGAAGACCAGCGGTTTTCAACGATGAAGATGAAAAATCTATTGTTGAGTGTATCAAGCTTGCAGGGGAATGGGGTTTCCCCCTAACTAAAGTAGATGTTCGTCTTGTAGTCAAGGGCTTCTTAGACCGTAAAGGATGCACAGAGCTTCGTTTTCAAAACAATATGCCTGGTCCAGATTGGGTTGAGTCATTTCTGAACAGAAACAAAGGGGATTTGACCCAGAggttgtgccaaaatataaaaagATCCAGAGCTAATGTTGACGATGACATTTTAAACAAATACTTTGTTGAACTTCAGAAGACTTTAAAGGATGTTGACCCTAGTTTAATCGTAAATTACGATGAAACTAATATCACTGATGACCCACAGCGAAAAAAAGTCCTTGTGAAAAGTAACTGTCATCACCCAGAGCGAATCATGGATTCCTACAAGTCCAGCGTATCCGTTATGTTTTCTGTCACAGCCAATGGGGTTCTACTGCCGCCGTATGTGGTATACAAAGCCAAATGTCCCCCATATGACACCTGGACAACAGGACTGTGGTTATAA
- Protein Sequence
- MPQNYIRKVGSRQYRNFTDDQMEKALKGVQEEGLAIRKAAEKYGVSKDSLYRRLKGKHTGKYGRPAVFNDEDEKSIVECIKLAGEWGFPLTKVDVRLVVKGFLDRKGCTELRFQNNMPGPDWVESFLNRNKGDLTQRLCQNIKRSRANVDDDILNKYFVELQKTLKDVDPSLIVNYDETNITDDPQRKKVLVKSNCHHPERIMDSYKSSVSVMFSVTANGVLLPPYVVYKAKCPPYDTWTTGLWL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00944164;
- 90% Identity
- iTF_00943746;
- 80% Identity
- -